EY757120

Overview
NameEY757120
Unique NameEY757120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length451
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_METJA (Nucleoside diphosphate kinase OS=Methanocaldococcus jannaschii GN=ndk PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 8.389e-12
Identity = 33/60 (55.00%), Postives = 42/60 (70.00%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 190
            GE  +   R +IG TNPA++ PGTIRGD A+ T  NIIH SDS ESA++EI L+F +  I
Sbjct:   78 GENAISVVRKMIGKTNPAEAEPGTIRGDFALTTPDNIIHASDSKESAEREIKLFFKEDEI 137          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_HERA2 (Nucleoside diphosphate kinase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=ndk PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 8.389e-12
Identity = 34/73 (46.58%), Postives = 49/73 (67.12%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 226
            G+ V++  R+ +GATNP ++APGTIRGD  +  GRN+IH SDS E+   E+AL+F  +  I  + S+  WI E
Sbjct:   77 GKDVIEIVRSTVGATNPVKAAPGTIRGDFGVNIGRNLIHASDSPENGDHEVALFFSSEELIRSERSVDQWITE 149          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_FRASN (Nucleoside diphosphate kinase OS=Frankia sp. (strain EAN1pec) GN=ndk PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 8.389e-12
Identity = 32/58 (55.17%), Postives = 45/58 (77.59%), Query Frame = 2
Query:    5 ASGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 178
            A G   V+  R +IGAT+P ++APG++RGD A+  G+N+IHGSDS ESA++EI L+FP
Sbjct:   77 AEGPRAVEALRGLIGATDPVKAAPGSLRGDFALEIGQNLIHGSDSPESAKREIDLFFP 134          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_COREF (Nucleoside diphosphate kinase OS=Corynebacterium efficiens GN=ndk PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 8.389e-12
Identity = 30/58 (51.72%), Postives = 41/58 (70.69%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSA-PGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 181
            GE  +   R + G T+P   A PGTIRGD A+  G N++HGSDS ESA++EI++WFP+
Sbjct:   78 GERAIDAWRQLAGGTDPVSKATPGTIRGDFALTVGENVVHGSDSPESAEREISIWFPN 135          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_ANAMM (Nucleoside diphosphate kinase OS=Anaplasma marginale (strain St. Maries) GN=ndk PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 8.389e-12
Identity = 33/60 (55.00%), Postives = 44/60 (73.33%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 190
            GE  VKT R ++GATNP+++APGTIRGDLA     N +HGSDS+E+A+ EI  +F +  I
Sbjct:   79 GESAVKTYRDVMGATNPSEAAPGTIRGDLAESIDANCVHGSDSLENAEWEIKFFFKEHEI 138          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_ANAMF (Nucleoside diphosphate kinase OS=Anaplasma marginale (strain Florida) GN=ndk PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 8.389e-12
Identity = 33/60 (55.00%), Postives = 44/60 (73.33%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 190
            GE  VKT R ++GATNP+++APGTIRGDLA     N +HGSDS+E+A+ EI  +F +  I
Sbjct:   79 GESAVKTYRDVMGATNPSEAAPGTIRGDLAESIDANCVHGSDSLENAEWEIKFFFKEHEI 138          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_MYCTU (Nucleoside diphosphate kinase OS=Mycobacterium tuberculosis GN=ndkA PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.096e-11
Identity = 33/57 (57.89%), Postives = 41/57 (71.93%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSA-PGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 178
            G   +   R + G T+P Q+A PGTIRGD A+ T  N++HGSDS ESAQ+EIALWFP
Sbjct:   78 GTRAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFP 134          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_MYCTA (Nucleoside diphosphate kinase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=ndk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.096e-11
Identity = 33/57 (57.89%), Postives = 41/57 (71.93%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSA-PGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 178
            G   +   R + G T+P Q+A PGTIRGD A+ T  N++HGSDS ESAQ+EIALWFP
Sbjct:   78 GTRAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFP 134          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_MYCBT (Nucleoside diphosphate kinase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=ndk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.096e-11
Identity = 33/57 (57.89%), Postives = 41/57 (71.93%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSA-PGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 178
            G   +   R + G T+P Q+A PGTIRGD A+ T  N++HGSDS ESAQ+EIALWFP
Sbjct:   78 GTRAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFP 134          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_MYCBP (Nucleoside diphosphate kinase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=ndk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.096e-11
Identity = 33/57 (57.89%), Postives = 41/57 (71.93%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSA-PGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 178
            G   +   R + G T+P Q+A PGTIRGD A+ T  N++HGSDS ESAQ+EIALWFP
Sbjct:   78 GTRAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFP 134          
The following BLAST results are available for this feature:
BLAST of EY757120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
NDK_METJA8.389e-1255.00Nucleoside diphosphate kinase OS=Methanocaldococcu... [more]
NDK_HERA28.389e-1246.58Nucleoside diphosphate kinase OS=Herpetosiphon aur... [more]
NDK_FRASN8.389e-1255.17Nucleoside diphosphate kinase OS=Frankia sp. (stra... [more]
NDK_COREF8.389e-1251.72Nucleoside diphosphate kinase OS=Corynebacterium e... [more]
NDK_ANAMM8.389e-1255.00Nucleoside diphosphate kinase OS=Anaplasma margina... [more]
NDK_ANAMF8.389e-1255.00Nucleoside diphosphate kinase OS=Anaplasma margina... [more]
NDK_MYCTU1.096e-1157.89Nucleoside diphosphate kinase OS=Mycobacterium tub... [more]
NDK_MYCTA1.096e-1157.89Nucleoside diphosphate kinase OS=Mycobacterium tub... [more]
NDK_MYCBT1.096e-1157.89Nucleoside diphosphate kinase OS=Mycobacterium bov... [more]
NDK_MYCBP1.096e-1157.89Nucleoside diphosphate kinase OS=Mycobacterium bov... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-017-F04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757120 ID=EY757120; Name=EY757120; organism=Citrus sinensis; type=EST; length=451bp
CCACGCGTCCGGTGAAGGTGTTGTTAAGACTGGCCGCACTATTATTGGAG
CCACCAACCCTGCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCT
ATCGTGACGGGCAGGAATATTATCCATGGAAGTGACTCAGTTGAGAGTGC
CCAGAAAGAAATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGA
GCAGCCTTCACCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGC
CTAATTGTTCCTGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTT
ATTTATGGTTACTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAAT
TGAGACCAATCCTGGTTATGTTGGCTGCTTTTATTCTTGTGGTTGCCATA
TACAATATTTAAGCTTTTTTGTTGACTGTATTAAAAAAAAAAAAAAAAAA
A
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