EY757120

Overview
NameEY757120
Unique NameEY757120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length451
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_MYCBO (Nucleoside diphosphate kinase OS=Mycobacterium bovis GN=ndk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.096e-11
Identity = 33/57 (57.89%), Postives = 41/57 (71.93%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSA-PGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 178
            G   +   R + G T+P Q+A PGTIRGD A+ T  N++HGSDS ESAQ+EIALWFP
Sbjct:   78 GTRAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFP 134          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_DEIGD (Nucleoside diphosphate kinase OS=Deinococcus geothermalis (strain DSM 11300) GN=ndk PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 1.096e-11
Identity = 31/55 (56.36%), Postives = 40/55 (72.73%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 175
            GE  +   R ++GATNPA +APGTIR D A  TG N+ HGSDS ESA +E++L+F
Sbjct:   77 GENAIAGWRAMMGATNPANAAPGTIRADFATTTGENVTHGSDSPESAARELSLFF 131          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_THERP (Nucleoside diphosphate kinase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=ndk PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.431e-11
Identity = 33/71 (46.48%), Postives = 48/71 (67.61%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI 220
            G   ++  R  +G T+PAQ+ PGTIRGDLA+  G+N+IHGSDS E A  EI L+F  D  ++++ ++  WI
Sbjct:   77 GPRAIEITRKTMGKTDPAQAEPGTIRGDLALTIGQNVIHGSDSPEKASYEIGLFFREDELVSYERAIDRWI 147          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_SYMTH (Nucleoside diphosphate kinase OS=Symbiobacterium thermophilum GN=ndk PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.869e-11
Identity = 31/71 (43.66%), Postives = 43/71 (60.56%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIY 223
            G   +   R  +GATNPA + PGTIR D A     N++HGSD  ESA++EI LWF +   ++  S+  WI+
Sbjct:   77 GPNAISIIRKTMGATNPANAEPGTIRADFACDVSYNVVHGSDGPESAEREIRLWFGEVEPSYSRSVDRWIF 147          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_STRA5 (Nucleoside diphosphate kinase OS=Streptococcus agalactiae serotype V GN=ndk PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.869e-11
Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 2
Query:    8 SGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGR-----NIIHGSDSVESAQKEIALWF 175
            SGE V+ T RT++G+TNP  + PGTIRGD A          NI+HGSDS ESA +EIA+WF
Sbjct:   76 SGEEVISTWRTMMGSTNPKDALPGTIRGDFAQAPSPNQATCNIVHGSDSPESATREIAIWF 136          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_STRA3 (Nucleoside diphosphate kinase OS=Streptococcus agalactiae serotype III GN=ndk PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.869e-11
Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 2
Query:    8 SGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGR-----NIIHGSDSVESAQKEIALWF 175
            SGE V+ T RT++G+TNP  + PGTIRGD A          NI+HGSDS ESA +EIA+WF
Sbjct:   76 SGEEVISTWRTMMGSTNPKDALPGTIRGDFAQAPSPNQATCNIVHGSDSPESATREIAIWF 136          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_STRA1 (Nucleoside diphosphate kinase OS=Streptococcus agalactiae serotype Ia GN=ndk PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.869e-11
Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 2
Query:    8 SGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGR-----NIIHGSDSVESAQKEIALWF 175
            SGE V+ T RT++G+TNP  + PGTIRGD A          NI+HGSDS ESA +EIA+WF
Sbjct:   76 SGEEVISTWRTMMGSTNPKDALPGTIRGDFAQAPSPNQATCNIVHGSDSPESATREIAIWF 136          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_MYCA1 (Nucleoside diphosphate kinase OS=Mycobacterium avium (strain 104) GN=ndk PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.869e-11
Identity = 32/58 (55.17%), Postives = 41/58 (70.69%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSA-PGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 181
            G   +   R + G T+P + A PGTIRGD  + T  N++HGSDSVESA++EIALWFPD
Sbjct:   78 GPRAIAAFRQLAGGTDPVEKAIPGTIRGDFGLETQFNLVHGSDSVESAKREIALWFPD 135          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_METS3 (Nucleoside diphosphate kinase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=ndk PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.869e-11
Identity = 33/60 (55.00%), Postives = 44/60 (73.33%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 190
            GE  + T R ++GATNP ++  GTIRGD A+ TGRNIIH SDS +SA++EI L+F +  I
Sbjct:   78 GEEAISTIRKLVGATNPLEADLGTIRGDFAMDTGRNIIHASDSPDSAEREINLFFNEDEI 137          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_ACIBY (Nucleoside diphosphate kinase OS=Acinetobacter baumannii (strain AYE) GN=ndk PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.869e-11
Identity = 33/60 (55.00%), Postives = 40/60 (66.67%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 190
            GE  V   R I+GATNP ++APGTIR D A+    N  HGSDSV SA++EIA +F D  I
Sbjct:   79 GENAVLAHREILGATNPKEAAPGTIRADFAVSIDENAAHGSDSVASAEREIAYFFADNEI 138          
The following BLAST results are available for this feature:
BLAST of EY757120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
NDK_MYCBO1.096e-1157.89Nucleoside diphosphate kinase OS=Mycobacterium bov... [more]
NDK_DEIGD1.096e-1156.36Nucleoside diphosphate kinase OS=Deinococcus geoth... [more]
NDK_THERP1.431e-1146.48Nucleoside diphosphate kinase OS=Thermomicrobium r... [more]
NDK_SYMTH1.869e-1143.66Nucleoside diphosphate kinase OS=Symbiobacterium t... [more]
NDK_STRA51.869e-1155.74Nucleoside diphosphate kinase OS=Streptococcus aga... [more]
NDK_STRA31.869e-1155.74Nucleoside diphosphate kinase OS=Streptococcus aga... [more]
NDK_STRA11.869e-1155.74Nucleoside diphosphate kinase OS=Streptococcus aga... [more]
NDK_MYCA11.869e-1155.17Nucleoside diphosphate kinase OS=Mycobacterium avi... [more]
NDK_METS31.869e-1155.00Nucleoside diphosphate kinase OS=Methanobrevibacte... [more]
NDK_ACIBY1.869e-1155.00Nucleoside diphosphate kinase OS=Acinetobacter bau... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-017-F04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757120 ID=EY757120; Name=EY757120; organism=Citrus sinensis; type=EST; length=451bp
CCACGCGTCCGGTGAAGGTGTTGTTAAGACTGGCCGCACTATTATTGGAG
CCACCAACCCTGCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCT
ATCGTGACGGGCAGGAATATTATCCATGGAAGTGACTCAGTTGAGAGTGC
CCAGAAAGAAATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGA
GCAGCCTTCACCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGC
CTAATTGTTCCTGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTT
ATTTATGGTTACTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAAT
TGAGACCAATCCTGGTTATGTTGGCTGCTTTTATTCTTGTGGTTGCCATA
TACAATATTTAAGCTTTTTTGTTGACTGTATTAAAAAAAAAAAAAAAAAA
A
back to top