EY757120

Overview
NameEY757120
Unique NameEY757120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length451
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_ACIBT (Nucleoside diphosphate kinase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=ndk PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.869e-11
Identity = 33/60 (55.00%), Postives = 40/60 (66.67%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 190
            GE  V   R I+GATNP ++APGTIR D A+    N  HGSDSV SA++EIA +F D  I
Sbjct:   79 GENAVLAHREILGATNPKEAAPGTIRADFAVSIDENAAHGSDSVASAEREIAYFFADNEI 138          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_ACIBS (Nucleoside diphosphate kinase OS=Acinetobacter baumannii (strain SDF) GN=ndk PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.869e-11
Identity = 33/60 (55.00%), Postives = 40/60 (66.67%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 190
            GE  V   R I+GATNP ++APGTIR D A+    N  HGSDSV SA++EIA +F D  I
Sbjct:   79 GENAVLAHREILGATNPKEAAPGTIRADFAVSIDENAAHGSDSVASAEREIAYFFADNEI 138          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_ACIBC (Nucleoside diphosphate kinase OS=Acinetobacter baumannii (strain ACICU) GN=ndk PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.869e-11
Identity = 33/60 (55.00%), Postives = 40/60 (66.67%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 190
            GE  V   R I+GATNP ++APGTIR D A+    N  HGSDSV SA++EIA +F D  I
Sbjct:   79 GENAVLAHREILGATNPKEAAPGTIRADFAVSIDENAAHGSDSVASAEREIAYFFADNEI 138          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_ACIB5 (Nucleoside diphosphate kinase OS=Acinetobacter baumannii (strain AB0057) GN=ndk PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.869e-11
Identity = 33/60 (55.00%), Postives = 40/60 (66.67%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 190
            GE  V   R I+GATNP ++APGTIR D A+    N  HGSDSV SA++EIA +F D  I
Sbjct:   79 GENAVLAHREILGATNPKEAAPGTIRADFAVSIDENAAHGSDSVASAEREIAYFFADNEI 138          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_ACIB3 (Nucleoside diphosphate kinase OS=Acinetobacter baumannii (strain AB307-0294) GN=ndk PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.869e-11
Identity = 33/60 (55.00%), Postives = 40/60 (66.67%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 190
            GE  V   R I+GATNP ++APGTIR D A+    N  HGSDSV SA++EIA +F D  I
Sbjct:   79 GENAVLAHREILGATNPKEAAPGTIRADFAVSIDENAAHGSDSVASAEREIAYFFADNEI 138          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_MYCS2 (Nucleoside diphosphate kinase OS=Mycobacterium smegmatis GN=ndk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.441e-11
Identity = 33/57 (57.89%), Postives = 40/57 (70.18%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSA-PGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 178
            G   V   R I G T+P + A PGTIRGD A++T  N++HGSDS ESA +EIALWFP
Sbjct:   78 GPRAVAAFRQIAGGTDPVEKAVPGTIRGDFALITQDNLVHGSDSPESAAREIALWFP 134          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_METB6 (Nucleoside diphosphate kinase OS=Methanoregula boonei (strain 6A8) GN=ndk PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.441e-11
Identity = 33/55 (60.00%), Postives = 39/55 (70.91%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 175
            G  VV   R +IGATNP ++APGTIRGD  I  GRN+IH SDS ESA +EI + F
Sbjct:   77 GRNVVAIVRKMIGATNPQEAAPGTIRGDFGIDIGRNVIHASDSPESAAREIGIHF 131          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_RUBXD (Nucleoside diphosphate kinase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=ndk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.188e-11
Identity = 30/55 (54.55%), Postives = 43/55 (78.18%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 175
            GEG +   R ++GAT+PA++APGTIRGDLA+    N++HGSDS +SA +E+ L+F
Sbjct:   77 GEGAIGVVRNLMGATDPAKAAPGTIRGDLALSMPDNLVHGSDSPQSAARELRLFF 131          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_MYCLE (Nucleoside diphosphate kinase OS=Mycobacterium leprae GN=ndk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.188e-11
Identity = 33/57 (57.89%), Postives = 41/57 (71.93%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQ-SAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 178
            G   V   R + G T+P + +APGTIRGDLA+ T  N++HGSDS  SAQ+EIALWFP
Sbjct:   78 GPRAVAAVRQLTGGTDPVEKAAPGTIRGDLALETQFNLVHGSDSTASAQREIALWFP 134          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_MYCLB (Nucleoside diphosphate kinase OS=Mycobacterium leprae (strain Br4923) GN=ndk PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.188e-11
Identity = 33/57 (57.89%), Postives = 41/57 (71.93%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQ-SAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 178
            G   V   R + G T+P + +APGTIRGDLA+ T  N++HGSDS  SAQ+EIALWFP
Sbjct:   78 GPRAVAAVRQLTGGTDPVEKAAPGTIRGDLALETQFNLVHGSDSTASAQREIALWFP 134          
The following BLAST results are available for this feature:
BLAST of EY757120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
NDK_ACIBT1.869e-1155.00Nucleoside diphosphate kinase OS=Acinetobacter bau... [more]
NDK_ACIBS1.869e-1155.00Nucleoside diphosphate kinase OS=Acinetobacter bau... [more]
NDK_ACIBC1.869e-1155.00Nucleoside diphosphate kinase OS=Acinetobacter bau... [more]
NDK_ACIB51.869e-1155.00Nucleoside diphosphate kinase OS=Acinetobacter bau... [more]
NDK_ACIB31.869e-1155.00Nucleoside diphosphate kinase OS=Acinetobacter bau... [more]
NDK_MYCS22.441e-1157.89Nucleoside diphosphate kinase OS=Mycobacterium sme... [more]
NDK_METB62.441e-1160.00Nucleoside diphosphate kinase OS=Methanoregula boo... [more]
NDK_RUBXD3.188e-1154.55Nucleoside diphosphate kinase OS=Rubrobacter xylan... [more]
NDK_MYCLE3.188e-1157.89Nucleoside diphosphate kinase OS=Mycobacterium lep... [more]
NDK_MYCLB3.188e-1157.89Nucleoside diphosphate kinase OS=Mycobacterium lep... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-017-F04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757120 ID=EY757120; Name=EY757120; organism=Citrus sinensis; type=EST; length=451bp
CCACGCGTCCGGTGAAGGTGTTGTTAAGACTGGCCGCACTATTATTGGAG
CCACCAACCCTGCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCT
ATCGTGACGGGCAGGAATATTATCCATGGAAGTGACTCAGTTGAGAGTGC
CCAGAAAGAAATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGA
GCAGCCTTCACCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGC
CTAATTGTTCCTGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTT
ATTTATGGTTACTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAAT
TGAGACCAATCCTGGTTATGTTGGCTGCTTTTATTCTTGTGGTTGCCATA
TACAATATTTAAGCTTTTTTGTTGACTGTATTAAAAAAAAAAAAAAAAAA
A
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