EY757120

Overview
NameEY757120
Unique NameEY757120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length451
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1498 contig Csv1_Contig1498:350..800. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_SHEB8 (Nucleoside diphosphate kinase OS=Shewanella baltica (strain OS185) GN=ndk PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 9.275e-11
Identity = 33/55 (60.00%), Postives = 38/55 (69.09%), Query Frame = 2 
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 175
            GE  V   R I+GATNPAQ+APGTIR D A     N  HGSD+VESA +EIA +F
Sbjct:   79 GENAVLAHREILGATNPAQAAPGTIRADFAESIDENAAHGSDAVESAAREIAYFF 133
[Close]
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_SHEB5 (Nucleoside diphosphate kinase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=ndk PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 9.275e-11
Identity = 33/55 (60.00%), Postives = 38/55 (69.09%), Query Frame = 2 
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 175
            GE  V   R I+GATNPAQ+APGTIR D A     N  HGSD+VESA +EIA +F
Sbjct:   79 GENAVLAHREILGATNPAQAAPGTIRADFAESIDENAAHGSDAVESAAREIAYFF 133
[Close]
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_SHEB2 (Nucleoside diphosphate kinase OS=Shewanella baltica (strain OS223) GN=ndk PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 9.275e-11
Identity = 33/55 (60.00%), Postives = 38/55 (69.09%), Query Frame = 2 
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 175
            GE  V   R I+GATNPAQ+APGTIR D A     N  HGSD+VESA +EIA +F
Sbjct:   79 GENAVLAHREILGATNPAQAAPGTIRADFAESIDENAAHGSDAVESAAREIAYFF 133
[Close]
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_RHOOB (Nucleoside diphosphate kinase OS=Rhodococcus opacus (strain B4) GN=ndk PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 9.275e-11
Identity = 31/62 (50.00%), Postives = 40/62 (64.52%), Query Frame = 2 
Query:   11 GEGVVKTGRTIIGATNPAQSA-PGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN 193
            G   +   R + G T+P + A PGTIRGD  +    N++HGSDSVESA++EIALWFP    N
Sbjct:   78 GPRAIAAFRQLAGGTDPVEKAVPGTIRGDFGLEAQENLVHGSDSVESAEREIALWFPQFAAN 139
[Close]
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_MYCUA (Nucleoside diphosphate kinase OS=Mycobacterium ulcerans (strain Agy99) GN=ndk PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 9.275e-11
Identity = 31/57 (54.39%), Postives = 39/57 (68.42%), Query Frame = 2 
Query:   11 GEGVVKTGRTIIGATNPAQSA-PGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 178
            G   +   R + G T+P + A PGTIRGD  + T  N++HGSDS ESAQ+EIALWFP
Sbjct:   78 GPRAIAAFRQLAGGTDPVEKATPGTIRGDFGLETQFNLVHGSDSAESAQREIALWFP 134
[Close]
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_MYCMM (Nucleoside diphosphate kinase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=ndk PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 9.275e-11
Identity = 31/57 (54.39%), Postives = 39/57 (68.42%), Query Frame = 2 
Query:   11 GEGVVKTGRTIIGATNPAQSA-PGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 178
            G   +   R + G T+P + A PGTIRGD  + T  N++HGSDS ESAQ+EIALWFP
Sbjct:   78 GPRAIAAFRQLAGGTDPVEKATPGTIRGDFGLETQFNLVHGSDSAESAQREIALWFP 134
[Close]
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_AGRT5 (Nucleoside diphosphate kinase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ndk PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 9.275e-11
Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 2 
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 190
            GE  +   R I+GATNPAQ+A GTIR   A+  G N +HGSD+ E+A +EIA WF +  I
Sbjct:   79 GENAILKNREIMGATNPAQAAEGTIRKSFALSIGENSVHGSDAPETAAQEIAYWFAETEI 138
The following BLAST results are available for this feature:
BLAST of EY757120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
NDK_SHEB89.275e-1160.00Nucleoside diphosphate kinase OS=Shewanella baltic... [more]
NDK_SHEB59.275e-1160.00Nucleoside diphosphate kinase OS=Shewanella baltic... [more]
NDK_SHEB29.275e-1160.00Nucleoside diphosphate kinase OS=Shewanella baltic... [more]
NDK_RHOOB9.275e-1150.00Nucleoside diphosphate kinase OS=Rhodococcus opacu... [more]
NDK_MYCUA9.275e-1154.39Nucleoside diphosphate kinase OS=Mycobacterium ulc... [more]
NDK_MYCMM9.275e-1154.39Nucleoside diphosphate kinase OS=Mycobacterium mar... [more]
NDK_AGRT59.275e-1151.67Nucleoside diphosphate kinase OS=Agrobacterium tum... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-017-F04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757120 ID=EY757120; Name=EY757120; organism=Citrus sinensis; type=EST; length=451bp
CCACGCGTCCGGTGAAGGTGTTGTTAAGACTGGCCGCACTATTATTGGAG
CCACCAACCCTGCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCT
ATCGTGACGGGCAGGAATATTATCCATGGAAGTGACTCAGTTGAGAGTGC
CCAGAAAGAAATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGA
GCAGCCTTCACCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGC
CTAATTGTTCCTGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTT
ATTTATGGTTACTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAAT
TGAGACCAATCCTGGTTATGTTGGCTGCTTTTATTCTTGTGGTTGCCATA
TACAATATTTAAGCTTTTTTGTTGACTGTATTAAAAAAAAAAAAAAAAAA
A
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