EY757120

Overview
NameEY757120
Unique NameEY757120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length451
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1498 contig Csv1_Contig1498:350..800. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_CYAP4 (Nucleoside diphosphate kinase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ndk PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.408e-20
Identity = 46/73 (63.01%), Postives = 56/73 (76.71%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 226
            G+GVV + R IIGATNP  S PGTIRGD  +  GRNIIHGSD+VE+AQ+EIALWF P   ++W+ +L  WIYE
Sbjct:   77 GKGVVASARKIIGATNPLNSEPGTIRGDYGVDIGRNIIHGSDAVETAQREIALWFQPAELVSWEPTLTSWIYE 149          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_ANAVT (Nucleoside diphosphate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ndk PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.408e-20
Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 226
            G+GV+ + R IIGATNP  + PGTIRGD  I  GRN+IHGSD+ E+AQKE++LWF D   +NWQ  L PW++E
Sbjct:   77 GDGVIASARKIIGATNPLTAEPGTIRGDFGINIGRNLIHGSDAPETAQKEVSLWFTDAELVNWQPHLTPWLHE 149          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_ANASP (Nucleoside diphosphate kinase OS=Anabaena sp. (strain PCC 7120) GN=ndk PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 6.408e-20
Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 226
            G+GV+ + R IIGATNP  + PGTIRGD  I  GRN+IHGSD+ E+AQKE++LWF D   +NWQ  L PW++E
Sbjct:   77 GDGVIASARKIIGATNPLTAEPGTIRGDFGINIGRNLIHGSDAPETAQKEVSLWFTDAELVNWQPHLTPWLHE 149          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_SYNY3 (Nucleoside diphosphate kinase OS=Synechocystis sp. (strain PCC 6803) GN=ndk PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 8.369e-20
Identity = 41/73 (56.16%), Postives = 57/73 (78.08%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 226
            G  +V T R +IGAT+P  +APGTIRGD  +  GRNIIHGSD++E+A++EI+LWF D  +N W ++L+PW+YE
Sbjct:   77 GNSIVSTSRQMIGATDPHAAAPGTIRGDYGVSVGRNIIHGSDAIETAKREISLWFKDEEVNEWDATLNPWLYE 149          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDKA_PONAB (Nucleoside diphosphate kinase A OS=Pongo abelii GN=NME1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 8.369e-20
Identity = 47/73 (64.38%), Postives = 54/73 (73.97%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 226
            G  VVKTGR ++G TNPA S PGTIRGD  I  GRNIIHGSDSVESA+KEI LWF P+  +++ S    WIYE
Sbjct:   80 GLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIGLWFHPEELVDYTSCAQNWIYE 152          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDKA_HUMAN (Nucleoside diphosphate kinase A OS=Homo sapiens GN=NME1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 8.369e-20
Identity = 47/73 (64.38%), Postives = 54/73 (73.97%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 226
            G  VVKTGR ++G TNPA S PGTIRGD  I  GRNIIHGSDSVESA+KEI LWF P+  +++ S    WIYE
Sbjct:   80 GLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIGLWFHPEELVDYTSCAQNWIYE 152          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_NEUCR (Nucleoside diphosphate kinase OS=Neurospora crassa GN=ndk-1 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 1.093e-19
Identity = 46/73 (63.01%), Postives = 54/73 (73.97%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 226
            G+  VKTGRTI+GATNP  SAPGTIRGD A+  GRN+ HGSDSVE+A+KEIALWF    +N W      WI+E
Sbjct:   80 GKDAVKTGRTILGATNPLASAPGTIRGDFALDMGRNVCHGSDSVENAKKEIALWFKPEELNQWNHHSAAWIFE 152          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDKB_PIG (Nucleoside diphosphate kinase B OS=Sus scrofa GN=NME2 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.428e-19
Identity = 46/73 (63.01%), Postives = 55/73 (75.34%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 226
            G  VVKTGR ++G TNPA S PGTIRGD  I  GRNIIHGSDSV+SA+KEI+LWF P+  + ++S    WIYE
Sbjct:   80 GLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEISLWFKPEELVEYKSCAFDWIYE 152          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDKB_CANFA (Nucleoside diphosphate kinase B OS=Canis familiaris GN=NME2 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.428e-19
Identity = 46/73 (63.01%), Postives = 56/73 (76.71%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 226
            G  VVKTGR ++G TNPA S PGTIRGD  I  GRNIIHGSDSV+SA+KEI+LWF P+  ++++S    WIYE
Sbjct:   80 GLNVVKTGRMMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEISLWFKPEELVDYKSCAFDWIYE 152          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDKA_MOUSE (Nucleoside diphosphate kinase A OS=Mus musculus GN=Nme1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.428e-19
Identity = 46/73 (63.01%), Postives = 55/73 (75.34%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 226
            G  VVKTGR ++G TNPA S PGTIRGD  I  GRNIIHGSDSV+SA+KEI+LWF P+  + ++S    WIYE
Sbjct:   80 GLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEISLWFQPEELVEYKSCAQNWIYE 152          
The following BLAST results are available for this feature:
BLAST of EY757120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
NDK_CYAP46.408e-2063.01Nucleoside diphosphate kinase OS=Cyanothece sp. (s... [more]
NDK_ANAVT6.408e-2058.90Nucleoside diphosphate kinase OS=Anabaena variabil... [more]
NDK_ANASP6.408e-2058.90Nucleoside diphosphate kinase OS=Anabaena sp. (str... [more]
NDK_SYNY38.369e-2056.16Nucleoside diphosphate kinase OS=Synechocystis sp.... [more]
NDKA_PONAB8.369e-2064.38Nucleoside diphosphate kinase A OS=Pongo abelii GN... [more]
NDKA_HUMAN8.369e-2064.38Nucleoside diphosphate kinase A OS=Homo sapiens GN... [more]
NDK_NEUCR1.093e-1963.01Nucleoside diphosphate kinase OS=Neurospora crassa... [more]
NDKB_PIG1.428e-1963.01Nucleoside diphosphate kinase B OS=Sus scrofa GN=N... [more]
NDKB_CANFA1.428e-1963.01Nucleoside diphosphate kinase B OS=Canis familiari... [more]
NDKA_MOUSE1.428e-1963.01Nucleoside diphosphate kinase A OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-017-F04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757120 ID=EY757120; Name=EY757120; organism=Citrus sinensis; type=EST; length=451bp
CCACGCGTCCGGTGAAGGTGTTGTTAAGACTGGCCGCACTATTATTGGAG
CCACCAACCCTGCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCT
ATCGTGACGGGCAGGAATATTATCCATGGAAGTGACTCAGTTGAGAGTGC
CCAGAAAGAAATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGA
GCAGCCTTCACCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGC
CTAATTGTTCCTGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTT
ATTTATGGTTACTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAAT
TGAGACCAATCCTGGTTATGTTGGCTGCTTTTATTCTTGTGGTTGCCATA
TACAATATTTAAGCTTTTTTGTTGACTGTATTAAAAAAAAAAAAAAAAAA
A
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