EY757120

Overview
NameEY757120
Unique NameEY757120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length451
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDKA1_XENLA (Nucleoside diphosphate kinase A1 OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.865e-19
Identity = 47/73 (64.38%), Postives = 53/73 (72.60%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 226
            G  VVKTGR ++G TNPA S PGTIRGD  I  GRNIIHGSDSVESA KEIALWF D   +  +S  + W+YE
Sbjct:   81 GLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESANKEIALWFKDEELVENKSCAYEWVYE 153          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_SYNP6 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ndk PE=3 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 2.435e-19
Identity = 42/73 (57.53%), Postives = 54/73 (73.97%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 226
            GEGVV   R +IGATNP  + PGTIRGD  +  GRNIIHGSD++E+AQ+EIALWF    + +W  ++ PW+YE
Sbjct:   77 GEGVVAAARKLIGATNPLTAEPGTIRGDFGVNIGRNIIHGSDAIETAQQEIALWFSPAELSDWTPTIQPWLYE 149          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_SYNE7 (Nucleoside diphosphate kinase OS=Synechococcus elongatus (strain PCC 7942) GN=ndk PE=3 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 2.435e-19
Identity = 42/73 (57.53%), Postives = 54/73 (73.97%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 226
            GEGVV   R +IGATNP  + PGTIRGD  +  GRNIIHGSD++E+AQ+EIALWF    + +W  ++ PW+YE
Sbjct:   77 GEGVVAAARKLIGATNPLTAEPGTIRGDFGVNIGRNIIHGSDAIETAQQEIALWFSPAELSDWTPTIQPWLYE 149          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_GINCI (Nucleoside diphosphate kinase (Fragment) OS=Ginglymostoma cirratum PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.180e-19
Identity = 46/73 (63.01%), Postives = 54/73 (73.97%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP-DGPINWQSSLHPWIYE 226
            G  VVKTGR ++G TNPA S PGTIRGD  I  GRNIIHGSDSVESA+KEI+LWF  +  + +Q+    WIYE
Sbjct:   79 GLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAKKEISLWFKREELVEYQNCAQDWIYE 151          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK4_SPIOL (Nucleoside diphosphate kinase 4, chloroplastic OS=Spinacia oleracea GN=NDK4 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 4.154e-19
Identity = 44/72 (61.11%), Postives = 55/72 (76.39%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIY 223
            GEGV+K GR +IGAT+P +S PGTIRGDLA+V GRNIIHGSD  E+A+ EI LWF P+  +N+  +   WIY
Sbjct:  161 GEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEELVNYTHNAEKWIY 232          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK3_SPIOL (Nucleoside diphosphate kinase 3 OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 4.154e-19
Identity = 44/72 (61.11%), Postives = 55/72 (76.39%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIY 223
            GEGV+K GR +IGAT+P +S PGTIRGDLA+V GRNIIHGSD  E+A+ EI LWF P+  +N+  +   WIY
Sbjct:   79 GEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVNGRNIIHGSDGPETAKDEIKLWFKPEELVNYTHNAEKWIY 150          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_YEAST (Nucleoside diphosphate kinase OS=Saccharomyces cerevisiae GN=YNK1 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 5.425e-19
Identity = 44/73 (60.27%), Postives = 56/73 (76.71%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 226
            G+ VV+ GRTI+GATNP  SAPGTIRGD  I  GRN+ HGSDSV+SA++EI LWF  +  ++W+S+   WIYE
Sbjct:   81 GKDVVRQGRTILGATNPLGSAPGTIRGDFGIDLGRNVCHGSDSVDSAEREINLWFKKEELVDWESNQAKWIYE 153          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_ASHGO (Nucleoside diphosphate kinase OS=Ashbya gossypii GN=NDK1 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 5.425e-19
Identity = 45/73 (61.64%), Postives = 55/73 (75.34%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 226
            G+ VVK GR I+GATNP  SAPGTIRGD A+  GRN+ HGSDSVESAQ+EI LWF  +  ++W+ +   WIYE
Sbjct:   79 GKDVVKQGRVILGATNPLNSAPGTIRGDFALDMGRNVCHGSDSVESAQREIDLWFKKEELVDWKLNQLSWIYE 151          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK8_HUMAN (Putative nucleoside diphosphate kinase OS=Homo sapiens GN=NME2P1 PE=5 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 5.425e-19
Identity = 45/73 (61.64%), Postives = 56/73 (76.71%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 226
            G  VVKTGR ++G TNPA S PGTIRGD  I  GRNIIHGSDSV+SA+KEI+L F P+  ++++S  H W+YE
Sbjct:   65 GLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEISLRFKPEELVDYKSCAHDWVYE 137          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK4_ARATH (Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDK4 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 5.425e-19
Identity = 43/72 (59.72%), Postives = 57/72 (79.17%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIY 223
            GEGV++ GR +IGAT+P +S PGTIRGDLA+V GRNIIHGSD  E+A+ EI+LWF P+  +++ S+   WIY
Sbjct:  163 GEGVIRYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEISLWFKPEELVSYTSNAEKWIY 234          
The following BLAST results are available for this feature:
BLAST of EY757120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
NDKA1_XENLA1.865e-1964.38Nucleoside diphosphate kinase A1 OS=Xenopus laevis... [more]
NDK_SYNP62.435e-1957.53Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK_SYNE72.435e-1957.53Nucleoside diphosphate kinase OS=Synechococcus elo... [more]
NDK_GINCI3.180e-1963.01Nucleoside diphosphate kinase (Fragment) OS=Gingly... [more]
NDK4_SPIOL4.154e-1961.11Nucleoside diphosphate kinase 4, chloroplastic OS=... [more]
NDK3_SPIOL4.154e-1961.11Nucleoside diphosphate kinase 3 OS=Spinacia olerac... [more]
NDK_YEAST5.425e-1960.27Nucleoside diphosphate kinase OS=Saccharomyces cer... [more]
NDK_ASHGO5.425e-1961.64Nucleoside diphosphate kinase OS=Ashbya gossypii G... [more]
NDK8_HUMAN5.425e-1961.64Putative nucleoside diphosphate kinase OS=Homo sap... [more]
NDK4_ARATH5.425e-1959.72Nucleoside diphosphate kinase IV, chloroplastic/mi... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-017-F04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757120 ID=EY757120; Name=EY757120; organism=Citrus sinensis; type=EST; length=451bp
CCACGCGTCCGGTGAAGGTGTTGTTAAGACTGGCCGCACTATTATTGGAG
CCACCAACCCTGCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCT
ATCGTGACGGGCAGGAATATTATCCATGGAAGTGACTCAGTTGAGAGTGC
CCAGAAAGAAATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGA
GCAGCCTTCACCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGC
CTAATTGTTCCTGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTT
ATTTATGGTTACTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAAT
TGAGACCAATCCTGGTTATGTTGGCTGCTTTTATTCTTGTGGTTGCCATA
TACAATATTTAAGCTTTTTTGTTGACTGTATTAAAAAAAAAAAAAAAAAA
A
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