EY757120

Overview
NameEY757120
Unique NameEY757120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length451
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_CYAA5 (Nucleoside diphosphate kinase OS=Cyanothece sp. (strain ATCC 51142) GN=ndk PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 5.998e-18
Identity = 38/73 (52.05%), Postives = 55/73 (75.34%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 226
            G+GVV + R +IGATNP  + PGTIRGD  +  GRN+IHGSD++E+AQ+EI+LWF +  + +W+ +   W+YE
Sbjct:   77 GDGVVASARKLIGATNPLSAEPGTIRGDFGVSVGRNLIHGSDAIETAQREISLWFNEKELSSWEPTAKTWLYE 149          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK2_ARATH (Nucleoside diphosphate kinase II, chloroplastic OS=Arabidopsis thaliana GN=NDPK2 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 5.998e-18
Identity = 41/73 (56.16%), Postives = 54/73 (73.97%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 226
            G GVV + R +IG T+P Q+ PGTIRGDLA+ TGRNI+HGSDS E+ ++EI LWF +G +  W S+L  W+ E
Sbjct:  159 GVGVVASARKLIGKTDPLQAEPGTIRGDLAVQTGRNIVHGSDSPENGKREIGLWFKEGELCKWDSALATWLRE 231          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK2_SPIOL (Nucleoside diphosphate kinase 2, chloroplastic OS=Spinacia oleracea GN=NDPK2 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 7.834e-18
Identity = 40/73 (54.79%), Postives = 54/73 (73.97%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 226
            G GVV + R +IGAT+P Q+ PGTIRGDLA+ TGRN++HGSDS ++ ++EI LWF +G I  W  +  PW+ E
Sbjct:  161 GVGVVASSRKLIGATDPLQAEPGTIRGDLAVQTGRNVVHGSDSPDNGKREIGLWFKEGEICQWTPAQAPWLRE 233          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_ARCFU (Nucleoside diphosphate kinase OS=Archaeoglobus fulgidus GN=ndk PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.023e-17
Identity = 39/73 (53.42%), Postives = 55/73 (75.34%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 226
            G+  +K  RT++GATNPA++APGTIRGD  +  GRN++H SDS +SA++EI+L+F D  I NW+ +   WIYE
Sbjct:   77 GKNAIKVVRTLVGATNPAEAAPGTIRGDFGLDVGRNVVHASDSPQSAEREISLFFSDDEIVNWEKADEDWIYE 149          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_SYNJB (Nucleoside diphosphate kinase OS=Synechococcus sp. GN=ndk PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.336e-17
Identity = 40/73 (54.79%), Postives = 51/73 (69.86%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 226
            G+GV+   R +IG TNP ++ PGTIRGD  I  GRN+IHGSD VE+AQ+EIALWF +   ++W      WIYE
Sbjct:   77 GKGVIAAARKLIGKTNPLEAEPGTIRGDFGIDIGRNLIHGSDGVETAQREIALWFDESELVSWTPVAQSWIYE 149          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK3_ARATH (Nucleoside diphosphate kinase III, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=NDPK3 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.336e-17
Identity = 40/72 (55.56%), Postives = 55/72 (76.39%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIY 223
            G+GV++ GR +IGAT+P +S PGTIRGDLA+  GRNIIHGSD  E+A+ EI+LWF P   +++ S+   W+Y
Sbjct:  164 GDGVIRYGRKLIGATDPQKSEPGTIRGDLAVTVGRNIIHGSDGPETAKDEISLWFKPQELVSYTSNSEKWLY 235          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_TRIEI (Nucleoside diphosphate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=ndk PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.745e-17
Identity = 42/73 (57.53%), Postives = 53/73 (72.60%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 226
            GEGVV + R IIGATNP  + PGTIRGD  I  GRN+IHGSD++E+AQ EI LWF +   ++W+ +L  WI E
Sbjct:   77 GEGVVASARKIIGATNPLTAEPGTIRGDYGISLGRNLIHGSDAIETAQTEINLWFKEEELVSWKPTLTSWIVE 149          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_SYNJA (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=ndk PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.745e-17
Identity = 39/73 (53.42%), Postives = 50/73 (68.49%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 226
            G+GV+   R +IG TNP  + PGTIRGD  I  GRN++HGSD  E+AQ+EIALWF +   +NW  +   WIYE
Sbjct:   77 GKGVIAAARKLIGKTNPLDAEPGTIRGDFGIDIGRNLVHGSDGPETAQREIALWFQESELVNWTPATQSWIYE 149          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_STACT (Nucleoside diphosphate kinase OS=Staphylococcus carnosus (strain TM300) GN=ndk PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.745e-17
Identity = 40/73 (54.79%), Postives = 55/73 (75.34%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 226
            GE VV+  R +IG TNP ++APGTIRGDL +  GRN+IHGSDSVESA++EI+LWF    ++ + ++   W+YE
Sbjct:   77 GENVVEVTRNMIGKTNPTEAAPGTIRGDLGLTVGRNVIHGSDSVESAKREISLWFEPNELSVYTANDEEWLYE 149          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_BACSK (Nucleoside diphosphate kinase OS=Bacillus clausii (strain KSM-K16) GN=ndk PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.745e-17
Identity = 39/71 (54.93%), Postives = 56/71 (78.87%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWI 220
            GEGV+K  R +IGATNP+++APGTIRGDLA+  G N++HGSDS ESA++EIA++F +  +N +Q   + W+
Sbjct:   77 GEGVIKAARQLIGATNPSEAAPGTIRGDLAVNVGMNVVHGSDSPESAEREIAIFFKEEELNDYQKDSNKWV 147          
The following BLAST results are available for this feature:
BLAST of EY757120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
NDK_CYAA55.998e-1852.05Nucleoside diphosphate kinase OS=Cyanothece sp. (s... [more]
NDK2_ARATH5.998e-1856.16Nucleoside diphosphate kinase II, chloroplastic OS... [more]
NDK2_SPIOL7.834e-1854.79Nucleoside diphosphate kinase 2, chloroplastic OS=... [more]
NDK_ARCFU1.023e-1753.42Nucleoside diphosphate kinase OS=Archaeoglobus ful... [more]
NDK_SYNJB1.336e-1754.79Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK3_ARATH1.336e-1755.56Nucleoside diphosphate kinase III, chloroplastic/m... [more]
NDK_TRIEI1.745e-1757.53Nucleoside diphosphate kinase OS=Trichodesmium ery... [more]
NDK_SYNJA1.745e-1753.42Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK_STACT1.745e-1754.79Nucleoside diphosphate kinase OS=Staphylococcus ca... [more]
NDK_BACSK1.745e-1754.93Nucleoside diphosphate kinase OS=Bacillus clausii ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-017-F04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757120 ID=EY757120; Name=EY757120; organism=Citrus sinensis; type=EST; length=451bp
CCACGCGTCCGGTGAAGGTGTTGTTAAGACTGGCCGCACTATTATTGGAG
CCACCAACCCTGCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCT
ATCGTGACGGGCAGGAATATTATCCATGGAAGTGACTCAGTTGAGAGTGC
CCAGAAAGAAATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGA
GCAGCCTTCACCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGC
CTAATTGTTCCTGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTT
ATTTATGGTTACTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAAT
TGAGACCAATCCTGGTTATGTTGGCTGCTTTTATTCTTGTGGTTGCCATA
TACAATATTTAAGCTTTTTTGTTGACTGTATTAAAAAAAAAAAAAAAAAA
A
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