EY757120

Overview
NameEY757120
Unique NameEY757120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length451
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_STAAW (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain MW2) GN=ndk PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.477e-16
Identity = 39/73 (53.42%), Postives = 54/73 (73.97%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 226
            GE  V   R IIG+TNP++++PG+IRGDL +  GRNIIHGSDS++SA++EI LWF +  I ++ S    W+YE
Sbjct:   77 GEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLDSAEREINLWFNENEITSYASPRDAWLYE 149          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_STAAS (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain MSSA476) GN=ndk PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.477e-16
Identity = 39/73 (53.42%), Postives = 54/73 (73.97%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 226
            GE  V   R IIG+TNP++++PG+IRGDL +  GRNIIHGSDS++SA++EI LWF +  I ++ S    W+YE
Sbjct:   77 GEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLDSAEREINLWFNENEITSYASPRDAWLYE 149          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDKC_DICDI (Nucleoside diphosphate kinase, cytosolic OS=Dictyostelium discoideum GN=ndkC-1 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.929e-16
Identity = 41/72 (56.94%), Postives = 51/72 (70.83%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 226
            G+GVV + R +IG TNP  SAPG+IRGD  +  GRNIIHGSDSVESA +EIALWF    +  +   +P +YE
Sbjct:   84 GKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIHGSDSVESANREIALWFKPEELLTEVKPNPNLYE 155          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK3_MOUSE (Nucleoside diphosphate kinase 3 OS=Mus musculus GN=Nme3 PE=2 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 3.291e-16
Identity = 39/73 (53.42%), Postives = 50/73 (68.49%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 226
            G  VV   R +IGAT+P  + PGTIRGD  +  G+N+IHGSDSVESA +EIALWF +   + W+ S   W+YE
Sbjct:   97 GLDVVHASRALIGATDPGDAMPGTIRGDFCMEVGKNVIHGSDSVESAHREIALWFREAELLCWEDSAGHWLYE 169          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_SYNSC (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9605) GN=ndk PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 7.332e-16
Identity = 39/73 (53.42%), Postives = 50/73 (68.49%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 226
            G+GV+ + R +IGAT P ++ PGTIRGDLA+  GRN+IHGSD+ E+AQ EI LWF    +N W  S   W  E
Sbjct:   78 GDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDAAETAQFEIGLWFQASELNDWSPSDQGWRVE 150          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_SYNS9 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9902) GN=ndk PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 7.332e-16
Identity = 39/73 (53.42%), Postives = 50/73 (68.49%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 226
            G+GV+ + R +IGAT P +S PGTIRGDLA+  GRN+IHGSD+ E+A+ EI LWF    +N W  S   W  E
Sbjct:   78 GDGVIASARKLIGATKPLESEPGTIRGDLAVNIGRNVIHGSDAPETAEFEIGLWFQPSELNDWSPSDQAWRVE 150          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_PROM5 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9515) GN=ndk PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.251e-15
Identity = 42/73 (57.53%), Postives = 51/73 (69.86%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 226
            GEGV+ + R IIGAT P ++ PGTIRGDLAI  GRNIIHGSD  E+A+ EI LWF    I +W++S   W  E
Sbjct:   79 GEGVILSARKIIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGEETAKFEINLWFDQHEICDWETSDSEWRVE 151          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_DESAP (Nucleoside diphosphate kinase OS=Desulforudis audaxviator (strain MP104C) GN=ndk PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.251e-15
Identity = 41/73 (56.16%), Postives = 51/73 (69.86%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 226
            G  VV T R ++GAT PA++ PGTIRG   I  GRNI+HGSDS  SA +EI L+F DG  I ++ +L PWIYE
Sbjct:   77 GREVVTTVREMMGATQPAKALPGTIRGTYGIDVGRNIVHGSDSAASAAREIGLFFADGELIEYERALDPWIYE 149          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_SYNPX (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain WH8102) GN=ndk PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.786e-15
Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 226
            G+GV+ + R +IGAT P ++ PGTIRGDLA+  GRN+IHGSD+ E+A+ EI LWF    +N W  S   W  E
Sbjct:   78 GDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDAPETAEFEIGLWFDAAELNDWTPSDQTWRVE 150          
BLAST of EY757120 vs. ExPASy Swiss-Prot
Match: NDK_PROMP (Nucleoside diphosphate kinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ndk PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.786e-15
Identity = 40/70 (57.14%), Postives = 50/70 (71.43%), Query Frame = 2
Query:   11 GEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 217
            GEGV+ + R +IGAT P ++ PGTIRGDLAI  GRNIIHGSD  E+A+ EI LWF    I +W++S   W
Sbjct:   79 GEGVILSARKLIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGEETAKFEINLWFNQDEICDWETSDSEW 148          
The following BLAST results are available for this feature:
BLAST of EY757120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
NDK_STAAW1.477e-1653.42Nucleoside diphosphate kinase OS=Staphylococcus au... [more]
NDK_STAAS1.477e-1653.42Nucleoside diphosphate kinase OS=Staphylococcus au... [more]
NDKC_DICDI1.929e-1656.94Nucleoside diphosphate kinase, cytosolic OS=Dictyo... [more]
NDK3_MOUSE3.291e-1653.42Nucleoside diphosphate kinase 3 OS=Mus musculus GN... [more]
NDK_SYNSC7.332e-1653.42Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK_SYNS97.332e-1653.42Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK_PROM51.251e-1557.53Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_DESAP1.251e-1556.16Nucleoside diphosphate kinase OS=Desulforudis auda... [more]
NDK_SYNPX2.786e-1552.05Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK_PROMP2.786e-1557.14Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-017-F04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757120 ID=EY757120; Name=EY757120; organism=Citrus sinensis; type=EST; length=451bp
CCACGCGTCCGGTGAAGGTGTTGTTAAGACTGGCCGCACTATTATTGGAG
CCACCAACCCTGCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCT
ATCGTGACGGGCAGGAATATTATCCATGGAAGTGACTCAGTTGAGAGTGC
CCAGAAAGAAATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGA
GCAGCCTTCACCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGC
CTAATTGTTCCTGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTT
ATTTATGGTTACTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAAT
TGAGACCAATCCTGGTTATGTTGGCTGCTTTTATTCTTGTGGTTGCCATA
TACAATATTTAAGCTTTTTTGTTGACTGTATTAAAAAAAAAAAAAAAAAA
A
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