EY757108

Overview
NameEY757108
Unique NameEY757108
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757108 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.629e-13
Identity = 40/124 (32.26%), Postives = 65/124 (52.42%), Query Frame = 1
Query:   25 RVGNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVF 396
            R+  YP C +P    G   H D   + +L QD  V GL++  + +W  + P   ++V+N+GD    ++N +Y+S LHR +  +   R S+A F  P  D V+ P   LV+    + +VYP F +
Sbjct:  215 RLNYYPACQRPLDTLGTGPHCDPTSLTILHQD-HVGGLEVWAEGRWRAIRPRPGALVVNVGDTFMALSNARYRSCLHRAVVNSTAPRRSLAFFLCPEMDTVVRPPEELVDDH--HPRVYPDFTW 335          
BLAST of EY757108 vs. ExPASy Swiss-Prot
Match: G2OX3_ARATH (Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=GA2OX3 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.629e-13
Identity = 46/130 (35.38%), Postives = 73/130 (56.15%), Query Frame = 1
Query:   25 RVGNYPPCPKPDLIK--GLRAHTDAGGIILLFQDDEVSGLQL-LKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDY 405
            R+ +YP   +  + +  G   HTD   +I L + ++  GLQ+ +KD  WVDV P   S  + +GD L+V+TNG++KSV HRV+  T+ +R+S+  F  P     I P   LV K+  +  +Y +F +  Y
Sbjct:  181 RMNHYPEKEETPVKEEIGFGEHTDPQ-LISLLRSNDTEGLQICVKDGTWVDVTPDHSSFFVLVGDTLQVMTNGRFKSVKHRVVTNTKRSRISMIYFAGPPLSEKIAPLSCLVPKQ--DDCLYNEFTWSQY 307          
BLAST of EY757108 vs. ExPASy Swiss-Prot
Match: G2OX7_ARATH (Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.801e-12
Identity = 37/96 (38.54%), Postives = 55/96 (57.29%), Query Frame = 1
Query:   25 RVGNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNP 312
            R+  Y P      + GL  HTD   + +L QD ++ GL+L  + QW+ V P   ++ +N+GD  + ++NG Y+SV HRVI+     RMSIA F  P
Sbjct:  197 RLNKYHPSVFGSEVFGLVPHTDTSFLTILSQD-QIGGLELENNGQWISVKPCLEALTVNIGDMFQALSNGVYQSVRHRVISPANIERMSIAFFVCP 291          
BLAST of EY757108 vs. ExPASy Swiss-Prot
Match: ISP7_SCHPO (Sexual differentiation process protein isp7 OS=Schizosaccharomyces pombe GN=isp7 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.567e-11
Identity = 40/116 (34.48%), Postives = 63/116 (54.31%), Query Frame = 1
Query:    7 DPRVRGRVGNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLK--DDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPAL 348
            DP    R+  YP  P      G++ HTDA  + L+ QD+ V GL++L    + ++ V P   +++ NLGD + ++TN +YKS +HRV   +  +R +I  F     D V+ P P L
Sbjct:  254 DPTTSIRLLRYPSSPNR---LGVQEHTDADALTLMSQDN-VKGLEILDPVSNCFLSVSPAPGALIANLGDIMAILTNNRYKSSMHRVCNNSGSDRYTIPFFLQGNIDYVVAPLPGL 365          
The following BLAST results are available for this feature:
BLAST of EY757108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
GAOX1_ORYSJ1.629e-1332.26Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. ja... [more]
G2OX3_ARATH3.629e-1335.38Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis th... [more]
G2OX7_ARATH1.801e-1238.54Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis th... [more]
ISP7_SCHPO7.567e-1134.48Sexual differentiation process protein isp7 OS=Sch... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-017-E02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757108 ID=EY757108; Name=EY757108; organism=Citrus sinensis; type=EST; length=765bp
TTGCTCGACCCACGCGTCCGCGGACGCGTGGGCAATTACCCTCCATGCCC
AAAACCAGATCTGATCAAGGGACTTAGGGCCCATACTGATGCTGGTGGCA
TCATCTTGCTCTTTCAAGATGACGAAGTCAGTGGCCTCCAGCTGCTCAAA
GATGACCAATGGGTTGATGTTCCACCCATGAAACACTCCATTGTCATCAA
CCTCGGTGACCAACTTGAGGTGATAACCAATGGCAAGTACAAGAGTGTGC
TACATCGCGTGATTGCTCAAACAGAGGGTAACAGGATGTCCATAGCATCA
TTTTACAATCCAGGCAGTGATGCTGTGATCTACCCGGCACCAGCATTGGT
GGAGAAGGAGGCTGTGAACAGCCAAGTTTATCCGAAATTTGTGTTCGAGG
ATTACATGAAACTCTATGCTGGGCTGAAGTTTCAGGCCAAGGAGCCAAGG
TTTGAAGCCATGAAGAACATGGAGACCATTGTGAATCTGGGTCCTATTGC
AACTGTTTGAGTTCCCCTATGGCTCTTTGGTGTTAGAGCTGAGTTGTTTG
TGTTGGCTAGTGTGGAACATATATAGTTTTTTAAATAAGCCGAAAGCTCG
GACTGATCATAGTTCTTGTGGAGTCNAAGTCGACCGTGGTTGTGGTGTTT
CAGGTATTTATTGTAGAAAGTGACCAAATGGAATACTGTATTCCTCCTGT
TTCATATGAAATTATATAAGATTATATTTGGCCTCAAAANNNATAAAAAA
ANATAAAAAAATAAT
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