EY757098

Overview
NameEY757098
Unique NameEY757098
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length497
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_BOVIN (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Bos taurus GN=UQCRFS1 PE=1 SV=3)

HSP 1 Score: 100.908 bits (250), Expect = 3.343e-21
Identity = 39/56 (69.64%), Postives = 48/56 (85.71%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+P+ NAGDFGG++CPCHGSHYD SGRIRKGPAP NLEVP Y F  ++ +++G
Sbjct:  219 HLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPSYEFTSDDMVIVG 274          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_LAGLA (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Lagothrix lagotricha GN=UQCRFS1 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 4.366e-21
Identity = 39/56 (69.64%), Postives = 48/56 (85.71%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+P+ NAGDFGG++CPCHGSHYD SGRIRKGPAP NLEVP Y F  ++ +++G
Sbjct:  219 HLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPTYEFTGDDMVIVG 274          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_CHICK (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Gallus gallus GN=UQCRFS1 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 4.366e-21
Identity = 38/56 (67.86%), Postives = 50/56 (89.29%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+P+ N+GDFGG++CPCHGSHYD SGRIRKGPAP+NLEVP Y F+ ++ +++G
Sbjct:  217 HLGCVPIANSGDFGGYYCPCHGSHYDASGRIRKGPAPYNLEVPTYQFVGDDLVVVG 272          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_AOTAZ (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Aotus azarai GN=UQCRFS1 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 4.366e-21
Identity = 39/56 (69.64%), Postives = 48/56 (85.71%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+P+ NAGDFGG++CPCHGSHYD SGRIRKGPAP NLEVP Y F  ++ +++G
Sbjct:  219 HLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPTYEFTSDDLVIVG 274          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_MOUSE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Mus musculus GN=Uqcrfs1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 5.702e-21
Identity = 39/56 (69.64%), Postives = 48/56 (85.71%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+P+ NAGDFGG++CPCHGSHYD SGRIRKGPAP NLEVP Y F  ++ +++G
Sbjct:  219 HLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPAYEFTSDDVVVVG 274          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_THEGE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Theropithecus gelada GN=UQCRFS1 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.270e-20
Identity = 38/56 (67.86%), Postives = 48/56 (85.71%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+P+ NAGDFGG++CPCHGSHYD+SGRIR GPAP NLEVP Y F  ++ +++G
Sbjct:  219 HLGCVPIANAGDFGGYYCPCHGSHYDVSGRIRLGPAPLNLEVPPYEFTSDDMVVVG 274          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_PONPY (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Pongo pygmaeus GN=UQCRFS1 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.270e-20
Identity = 38/56 (67.86%), Postives = 48/56 (85.71%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+P+ NAGDFGG++CPCHGSHYD SGRIR GPAP NLEVP+Y F  ++ +++G
Sbjct:  219 HLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPIYEFTSDDMVIVG 274          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_RAT (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Rattus norvegicus GN=Uqcrfs1 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 1.659e-20
Identity = 39/56 (69.64%), Postives = 47/56 (83.93%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+P+ NAGDFGG++CPCHGSHYD SGRIRKGPAP NLEVP Y F   + +++G
Sbjct:  219 HLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPTYEFTSGDVVVVG 274          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_PANTR (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Pan troglodytes GN=UQCRFS1 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.167e-20
Identity = 38/56 (67.86%), Postives = 47/56 (83.93%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+P+ NAGDFGG++CPCHGSHYD SGRIR GPAP NLEVP Y F  ++ +++G
Sbjct:  219 HLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVIVG 274          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_PANPA (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Pan paniscus GN=UQCRFS1 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.167e-20
Identity = 38/56 (67.86%), Postives = 47/56 (83.93%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+P+ NAGDFGG++CPCHGSHYD SGRIR GPAP NLEVP Y F  ++ +++G
Sbjct:  219 HLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVIVG 274          
The following BLAST results are available for this feature:
BLAST of EY757098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
UCRI_BOVIN3.343e-2169.64Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_LAGLA4.366e-2169.64Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_CHICK4.366e-2167.86Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_AOTAZ4.366e-2169.64Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_MOUSE5.702e-2169.64Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_THEGE1.270e-2067.86Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_PONPY1.270e-2067.86Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_RAT1.659e-2069.64Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_PANTR2.167e-2067.86Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_PANPA2.167e-2067.86Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-017-D02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757098 ID=EY757098; Name=EY757098; organism=Citrus sinensis; type=EST; length=497bp
TCCGACCCACGCGTCCGCATTTGGGGTGCATTCCTTTACCAAATGCTGGT
GACTTTGGAGGTTGGTTCTGCCCCTGCCATGGTTCGCACTATGACATATC
TGGCAGGATCCGCAAGGGGCCAGCACCATTCAATCTAGAGGTACCCATGT
ACAATTTCTTGGACGAGAACAAGTTACTGATTGGGTGATCATTGATAGTG
GATATCTTTTTGGAGCAGTTCCTTTTGAATGAGTGTTGTAATAGTTTCCT
TTTTTTTTTTTTTATTTTTTTTATTTTCCCCCTCTCTTCCACCAAAGGAA
AATTTGATTCCACAAATTGATTTTGTTTTGCTTTAAGCTATTCAGCTATG
CTTTACATATAAAGCAATTCTGAAGTTGAGAATAATGCAACTGGAAATTT
GTTGAGCACTTTCACCTTGAATGGTTCTTAAATTTTGTTAAATAATCTAA
GTTTATGAAAAAAAAAAAAAAAAAGAACAAAAAACTTAAAGGAAAAA
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