EY757098

Overview
NameEY757098
Unique NameEY757098
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length497
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_HYLSY (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Hylobates syndactylus GN=UQCRFS1 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.167e-20
Identity = 38/56 (67.86%), Postives = 47/56 (83.93%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+P+ NAGDFGG++CPCHGSHYD SGRIR GPAP NLEVP Y F  ++ +++G
Sbjct:  219 HLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVIVG 274          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_HUMAN (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Homo sapiens GN=UQCRFS1 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 2.167e-20
Identity = 38/56 (67.86%), Postives = 47/56 (83.93%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+P+ NAGDFGG++CPCHGSHYD SGRIR GPAP NLEVP Y F  ++ +++G
Sbjct:  219 HLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVIVG 274          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_GORGO (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Gorilla gorilla gorilla GN=UQCRFS1 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.167e-20
Identity = 38/56 (67.86%), Postives = 47/56 (83.93%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+P+ NAGDFGG++CPCHGSHYD SGRIR GPAP NLEVP Y F  ++ +++G
Sbjct:  219 HLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVIVG 274          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_SCHPO (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Schizosaccharomyces pombe GN=rip1 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 2.830e-20
Identity = 39/56 (69.64%), Postives = 48/56 (85.71%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+P+  AGD+GGWFCPCHGSHYDISGRIR+GPAP NL +P Y F + +K++IG
Sbjct:  174 HLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRRGPAPLNLAIPAYTF-EGSKIIIG 228          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_COLPO (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Colobus polykomos GN=UQCRFS1 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 2.830e-20
Identity = 38/56 (67.86%), Postives = 47/56 (83.93%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+P+ NAGDFGG++CPCHGSHYD SGRIR GPAP NLEVP Y F  ++ +++G
Sbjct:  219 HLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVVVG 274          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_RHOVI (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodopseudomonas viridis GN=petA PE=3 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 4.827e-20
Identity = 40/56 (71.43%), Postives = 45/56 (80.36%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGCIPL + GD+GGWFCPCHGS YD SGR+RKGPAP NL VP Y F+D  K+ IG
Sbjct:  120 HLGCIPLGHQGDWGGWFCPCHGSQYDASGRVRKGPAPTNLPVPPYEFVDNTKIRIG 175          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_CERAE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cercopithecus aethiops GN=UQCRFS1 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 6.305e-20
Identity = 38/56 (67.86%), Postives = 47/56 (83.93%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+P+ NAGDFGG++CPCHGSHYD SGRIR GPAP NLEVP Y F  ++ +++G
Sbjct:  219 HLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNLEVPPYEFTGDDVVVVG 274          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_RICBR (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia bellii (strain RML369-C) GN=petA PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.834e-19
Identity = 37/56 (66.07%), Postives = 44/56 (78.57%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+PL N GD+ GWFCPCHGS YD SGR+R+GPAP NL VP Y F+ + K+ IG
Sbjct:  131 HLGCVPLANQGDYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTFISDKKIRIG 186          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRIL_HUMAN (Cytochrome b-c1 complex subunit Rieske-like protein 1 OS=Homo sapiens GN=UQCRFSL1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.834e-19
Identity = 37/56 (66.07%), Postives = 46/56 (82.14%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+P+ NAGDFGG++CPCHGSHYD SGRIR GPA  NLEVP Y F  ++ +++G
Sbjct:  228 HLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPATLNLEVPTYEFTSDDMVIVG 283          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_RICFE (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia felis GN=petA PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.337e-19
Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+PL N G++ GWFCPCHGS YD SGR+R+GPAP NL VP Y F+ + K+ IG
Sbjct:  122 HLGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTFISDKKIRIG 177          
The following BLAST results are available for this feature:
BLAST of EY757098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
UCRI_HYLSY2.167e-2067.86Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_HUMAN2.167e-2067.86Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_GORGO2.167e-2067.86Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_SCHPO2.830e-2069.64Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_COLPO2.830e-2067.86Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_RHOVI4.827e-2071.43Ubiquinol-cytochrome c reductase iron-sulfur subun... [more]
UCRI_CERAE6.305e-2067.86Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
UCRI_RICBR1.834e-1966.07Ubiquinol-cytochrome c reductase iron-sulfur subun... [more]
UCRIL_HUMAN1.834e-1966.07Cytochrome b-c1 complex subunit Rieske-like protei... [more]
UCRI_RICFE5.337e-1964.29Ubiquinol-cytochrome c reductase iron-sulfur subun... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-017-D02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757098 ID=EY757098; Name=EY757098; organism=Citrus sinensis; type=EST; length=497bp
TCCGACCCACGCGTCCGCATTTGGGGTGCATTCCTTTACCAAATGCTGGT
GACTTTGGAGGTTGGTTCTGCCCCTGCCATGGTTCGCACTATGACATATC
TGGCAGGATCCGCAAGGGGCCAGCACCATTCAATCTAGAGGTACCCATGT
ACAATTTCTTGGACGAGAACAAGTTACTGATTGGGTGATCATTGATAGTG
GATATCTTTTTGGAGCAGTTCCTTTTGAATGAGTGTTGTAATAGTTTCCT
TTTTTTTTTTTTTATTTTTTTTATTTTCCCCCTCTCTTCCACCAAAGGAA
AATTTGATTCCACAAATTGATTTTGTTTTGCTTTAAGCTATTCAGCTATG
CTTTACATATAAAGCAATTCTGAAGTTGAGAATAATGCAACTGGAAATTT
GTTGAGCACTTTCACCTTGAATGGTTCTTAAATTTTGTTAAATAATCTAA
GTTTATGAAAAAAAAAAAAAAAAAGAACAAAAAACTTAAAGGAAAAA
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