EY757098

Overview
NameEY757098
Unique NameEY757098
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length497
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_RICCN (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia conorii GN=petA PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.337e-19
Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+PL N G++ GWFCPCHGS YD SGR+R+GPAP NL VP Y F+ + K+ IG
Sbjct:  122 HLGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTFISDKKIRIG 177          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_PARDE (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Paracoccus denitrificans GN=petA PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.337e-19
Identity = 38/57 (66.67%), Postives = 47/57 (82.46%), Query Frame = 3
Query:   18 HLGCIPLPN-AGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+P+ + AGDFGGWFCPCHGSHYD SGRIR+GPAP NL +P+  FLD+  + +G
Sbjct:  134 HLGCVPIGDGAGDFGGWFCPCHGSHYDTSGRIRRGPAPQNLHIPVAEFLDDTTIKLG 190          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_RICPR (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia prowazekii GN=petA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.553e-18
Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+PL + G++ GWFCPCHGS YD SGR+RKGPAP NL VP Y F+ + K+ IG
Sbjct:  122 HLGCVPLSHKGEYNGWFCPCHGSQYDSSGRVRKGPAPLNLAVPPYIFISDKKIRIG 177          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_RHOSH (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodobacter sphaeroides GN=petA PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.553e-18
Identity = 37/57 (64.91%), Postives = 46/57 (80.70%), Query Frame = 3
Query:   18 HLGCIPLPN-AGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+P+   +GDFGGWFCPCHGSHYD +GRIRKGPAP NL +P+  F+DE  + +G
Sbjct:  131 HLGCVPIGGVSGDFGGWFCPCHGSHYDSAGRIRKGPAPENLPIPLAKFIDETTIQLG 187          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_RHOCA (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodobacter capsulatus GN=petA PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.553e-18
Identity = 37/57 (64.91%), Postives = 48/57 (84.21%), Query Frame = 3
Query:   18 HLGCIPLPN-AGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+P+ + +GDFGGWFCPCHGSHYD +GRIRKGPAP NL++P+  F+DE  + +G
Sbjct:  135 HLGCVPMGDKSGDFGGWFCPCHGSHYDSAGRIRKGPAPRNLDIPVAAFVDETTIKLG 191          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_RHORU (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodospirillum rubrum GN=petA PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 2.649e-18
Identity = 41/61 (67.21%), Postives = 44/61 (72.13%), Query Frame = 3
Query:   18 HLGCIPLPNA-----GDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGCIPL        GDF GWFCPCHGSHYD +GRIRKGPAP NL VP Y F D+  +LIG
Sbjct:  123 HLGCIPLGQKAGDPKGDFDGWFCPCHGSHYDSAGRIRKGPAPLNLPVPPYAFTDDTTVLIG 183          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_RICTY (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia typhi GN=petA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.518e-18
Identity = 36/56 (64.29%), Postives = 43/56 (76.79%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGC+PL N G++ GWFCPCHGS YD SGR+RKGPA  NL VP Y F+ + K+ IG
Sbjct:  122 HLGCVPLSNQGEYNGWFCPCHGSQYDSSGRVRKGPASLNLVVPPYIFISDTKIRIG 177          
BLAST of EY757098 vs. ExPASy Swiss-Prot
Match: UCRI_BRAJA (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Bradyrhizobium japonicum GN=petA PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.113e-16
Identity = 35/56 (62.50%), Postives = 44/56 (78.57%), Query Frame = 3
Query:   18 HLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPMYNFLDENKLLIG 185
            HLGCIP+ + G++ G+FCPCHGS YD SGRIR+GPAP NL VP Y F+ + K+ IG
Sbjct:  121 HLGCIPIAHEGNYDGFFCPCHGSQYDSSGRIRQGPAPANLPVPPYQFVSDTKIQIG 176          
The following BLAST results are available for this feature:
BLAST of EY757098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
UCRI_RICCN5.337e-1964.29Ubiquinol-cytochrome c reductase iron-sulfur subun... [more]
UCRI_PARDE5.337e-1966.67Ubiquinol-cytochrome c reductase iron-sulfur subun... [more]
UCRI_RICPR1.553e-1864.29Ubiquinol-cytochrome c reductase iron-sulfur subun... [more]
UCRI_RHOSH1.553e-1864.91Ubiquinol-cytochrome c reductase iron-sulfur subun... [more]
UCRI_RHOCA1.553e-1864.91Ubiquinol-cytochrome c reductase iron-sulfur subun... [more]
UCRI_RHORU2.649e-1867.21Ubiquinol-cytochrome c reductase iron-sulfur subun... [more]
UCRI_RICTY4.518e-1864.29Ubiquinol-cytochrome c reductase iron-sulfur subun... [more]
UCRI_BRAJA1.113e-1662.50Ubiquinol-cytochrome c reductase iron-sulfur subun... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-017-D02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757098 ID=EY757098; Name=EY757098; organism=Citrus sinensis; type=EST; length=497bp
TCCGACCCACGCGTCCGCATTTGGGGTGCATTCCTTTACCAAATGCTGGT
GACTTTGGAGGTTGGTTCTGCCCCTGCCATGGTTCGCACTATGACATATC
TGGCAGGATCCGCAAGGGGCCAGCACCATTCAATCTAGAGGTACCCATGT
ACAATTTCTTGGACGAGAACAAGTTACTGATTGGGTGATCATTGATAGTG
GATATCTTTTTGGAGCAGTTCCTTTTGAATGAGTGTTGTAATAGTTTCCT
TTTTTTTTTTTTTATTTTTTTTATTTTCCCCCTCTCTTCCACCAAAGGAA
AATTTGATTCCACAAATTGATTTTGTTTTGCTTTAAGCTATTCAGCTATG
CTTTACATATAAAGCAATTCTGAAGTTGAGAATAATGCAACTGGAAATTT
GTTGAGCACTTTCACCTTGAATGGTTCTTAAATTTTGTTAAATAATCTAA
GTTTATGAAAAAAAAAAAAAAAAAGAACAAAAAACTTAAAGGAAAAA
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