EY756985

Overview
NameEY756985
Unique NameEY756985
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: RPPH_SALPK (RNA pyrophosphohydrolase OS=Salmonella paratyphi A (strain AKU_12601) GN=rppH PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.684e-20
Identity = 63/176 (35.80%), Postives = 89/176 (50.57%), Query Frame = 2 
Query:  221 DGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAE--FLAETPYWLTYDFPLKVKQKLNRRWGTNYK--GQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVLKIFSPYILTDADERIXLNGRRPY 736
            DGYR NVGI + N   + ++A  R    ++WQ PQGG + GE    A  REL EE G++  +   LA T  WL Y  P ++      RW T     GQ QKWFL +    + EIN+    S  PEF+ W+W+     + + V FK+ VY +V+K F+  ++   D    L     Y
Sbjct:    5 DGYRPNVGIVICNRQGQVMWA--RRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLV-----RWDTKPVCIGQKQKWFLLQLMSADAEINM--QTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMALQDNPPKLQSAPAY 171
[Close]
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: RPPH_SALPC (RNA pyrophosphohydrolase OS=Salmonella paratyphi C (strain RKS4594) GN=rppH PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.684e-20
Identity = 63/176 (35.80%), Postives = 89/176 (50.57%), Query Frame = 2 
Query:  221 DGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAE--FLAETPYWLTYDFPLKVKQKLNRRWGTNYK--GQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVLKIFSPYILTDADERIXLNGRRPY 736
            DGYR NVGI + N   + ++A  R    ++WQ PQGG + GE    A  REL EE G++  +   LA T  WL Y  P ++      RW T     GQ QKWFL +    + EIN+    S  PEF+ W+W+     + + V FK+ VY +V+K F+  ++   D    L     Y
Sbjct:    5 DGYRPNVGIVICNRQGQVMWA--RRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLV-----RWDTKPVCIGQKQKWFLLQLMSADAEINM--QTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMALQDNPPKLQSAPAY 171
[Close]
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: RPPH_SALPB (RNA pyrophosphohydrolase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=rppH PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.684e-20
Identity = 63/176 (35.80%), Postives = 89/176 (50.57%), Query Frame = 2 
Query:  221 DGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAE--FLAETPYWLTYDFPLKVKQKLNRRWGTNYK--GQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVLKIFSPYILTDADERIXLNGRRPY 736
            DGYR NVGI + N   + ++A  R    ++WQ PQGG + GE    A  REL EE G++  +   LA T  WL Y  P ++      RW T     GQ QKWFL +    + EIN+    S  PEF+ W+W+     + + V FK+ VY +V+K F+  ++   D    L     Y
Sbjct:    5 DGYRPNVGIVICNRQGQVMWA--RRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLV-----RWDTKPVCIGQKQKWFLLQLMSADAEINM--QTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMALQDNPPKLQSAPAY 171
[Close]
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: RPPH_SALPA (RNA pyrophosphohydrolase OS=Salmonella paratyphi A GN=rppH PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.684e-20
Identity = 63/176 (35.80%), Postives = 89/176 (50.57%), Query Frame = 2 
Query:  221 DGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAE--FLAETPYWLTYDFPLKVKQKLNRRWGTNYK--GQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVLKIFSPYILTDADERIXLNGRRPY 736
            DGYR NVGI + N   + ++A  R    ++WQ PQGG + GE    A  REL EE G++  +   LA T  WL Y  P ++      RW T     GQ QKWFL +    + EIN+    S  PEF+ W+W+     + + V FK+ VY +V+K F+  ++   D    L     Y
Sbjct:    5 DGYRPNVGIVICNRQGQVMWA--RRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLV-----RWDTKPVCIGQKQKWFLLQLMSADAEINM--QTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMALQDNPPKLQSAPAY 171
[Close]
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: RPPH_SALNS (RNA pyrophosphohydrolase OS=Salmonella newport (strain SL254) GN=rppH PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.684e-20
Identity = 63/176 (35.80%), Postives = 89/176 (50.57%), Query Frame = 2 
Query:  221 DGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAE--FLAETPYWLTYDFPLKVKQKLNRRWGTNYK--GQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVLKIFSPYILTDADERIXLNGRRPY 736
            DGYR NVGI + N   + ++A  R    ++WQ PQGG + GE    A  REL EE G++  +   LA T  WL Y  P ++      RW T     GQ QKWFL +    + EIN+    S  PEF+ W+W+     + + V FK+ VY +V+K F+  ++   D    L     Y
Sbjct:    5 DGYRPNVGIVICNRQGQVMWA--RRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLV-----RWDTKPVCIGQKQKWFLLQLMSADAEINM--QTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMALQDNPPKLQSAPAY 171
[Close]
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: RPPH_SALHS (RNA pyrophosphohydrolase OS=Salmonella heidelberg (strain SL476) GN=rppH PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.684e-20
Identity = 63/176 (35.80%), Postives = 89/176 (50.57%), Query Frame = 2 
Query:  221 DGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAE--FLAETPYWLTYDFPLKVKQKLNRRWGTNYK--GQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVLKIFSPYILTDADERIXLNGRRPY 736
            DGYR NVGI + N   + ++A  R    ++WQ PQGG + GE    A  REL EE G++  +   LA T  WL Y  P ++      RW T     GQ QKWFL +    + EIN+    S  PEF+ W+W+     + + V FK+ VY +V+K F+  ++   D    L     Y
Sbjct:    5 DGYRPNVGIVICNRQGQVMWA--RRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLV-----RWDTKPVCIGQKQKWFLLQLMSADAEINM--QTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMALQDNPPKLQSAPAY 171
[Close]
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: RPPH_SALG2 (RNA pyrophosphohydrolase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=rppH PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.684e-20
Identity = 63/176 (35.80%), Postives = 89/176 (50.57%), Query Frame = 2 
Query:  221 DGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAE--FLAETPYWLTYDFPLKVKQKLNRRWGTNYK--GQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVLKIFSPYILTDADERIXLNGRRPY 736
            DGYR NVGI + N   + ++A  R    ++WQ PQGG + GE    A  REL EE G++  +   LA T  WL Y  P ++      RW T     GQ QKWFL +    + EIN+    S  PEF+ W+W+     + + V FK+ VY +V+K F+  ++   D    L     Y
Sbjct:    5 DGYRPNVGIVICNRQGQVMWA--RRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLV-----RWDTKPVCIGQKQKWFLLQLMSADAEINM--QTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMALQDNPPKLQSAPAY 171
[Close]
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: RPPH_SALEP (RNA pyrophosphohydrolase OS=Salmonella enteritidis PT4 (strain P125109) GN=rppH PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.684e-20
Identity = 63/176 (35.80%), Postives = 89/176 (50.57%), Query Frame = 2 
Query:  221 DGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAE--FLAETPYWLTYDFPLKVKQKLNRRWGTNYK--GQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVLKIFSPYILTDADERIXLNGRRPY 736
            DGYR NVGI + N   + ++A  R    ++WQ PQGG + GE    A  REL EE G++  +   LA T  WL Y  P ++      RW T     GQ QKWFL +    + EIN+    S  PEF+ W+W+     + + V FK+ VY +V+K F+  ++   D    L     Y
Sbjct:    5 DGYRPNVGIVICNRQGQVMWA--RRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLV-----RWDTKPVCIGQKQKWFLLQLMSADAEINM--QTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMALQDNPPKLQSAPAY 171
[Close]
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: RPPH_SALDC (RNA pyrophosphohydrolase OS=Salmonella dublin (strain CT_02021853) GN=rppH PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.684e-20
Identity = 63/176 (35.80%), Postives = 89/176 (50.57%), Query Frame = 2 
Query:  221 DGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAE--FLAETPYWLTYDFPLKVKQKLNRRWGTNYK--GQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVLKIFSPYILTDADERIXLNGRRPY 736
            DGYR NVGI + N   + ++A  R    ++WQ PQGG + GE    A  REL EE G++  +   LA T  WL Y  P ++      RW T     GQ QKWFL +    + EIN+    S  PEF+ W+W+     + + V FK+ VY +V+K F+  ++   D    L     Y
Sbjct:    5 DGYRPNVGIVICNRQGQVMWA--RRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLV-----RWDTKPVCIGQKQKWFLLQLMSADAEINM--QTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMALQDNPPKLQSAPAY 171
[Close]
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: RPPH_SALCH (RNA pyrophosphohydrolase OS=Salmonella choleraesuis GN=rppH PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.684e-20
Identity = 63/176 (35.80%), Postives = 89/176 (50.57%), Query Frame = 2 
Query:  221 DGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVTSAE--FLAETPYWLTYDFPLKVKQKLNRRWGTNYK--GQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVLKIFSPYILTDADERIXLNGRRPY 736
            DGYR NVGI + N   + ++A  R    ++WQ PQGG + GE    A  REL EE G++  +   LA T  WL Y  P ++      RW T     GQ QKWFL +    + EIN+    S  PEF+ W+W+     + + V FK+ VY +V+K F+  ++   D    L     Y
Sbjct:    5 DGYRPNVGIVICNRQGQVMWA--RRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLV-----RWDTKPVCIGQKQKWFLLQLMSADAEINM--QTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMALQDNPPKLQSAPAY 171
The following BLAST results are available for this feature:
BLAST of EY756985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 325
Match NameE-valueIdentityDescription
RPPH_SALPK1.684e-2035.80RNA pyrophosphohydrolase OS=Salmonella paratyphi A... [more]
RPPH_SALPC1.684e-2035.80RNA pyrophosphohydrolase OS=Salmonella paratyphi C... [more]
RPPH_SALPB1.684e-2035.80RNA pyrophosphohydrolase OS=Salmonella paratyphi B... [more]
RPPH_SALPA1.684e-2035.80RNA pyrophosphohydrolase OS=Salmonella paratyphi A... [more]
RPPH_SALNS1.684e-2035.80RNA pyrophosphohydrolase OS=Salmonella newport (st... [more]
RPPH_SALHS1.684e-2035.80RNA pyrophosphohydrolase OS=Salmonella heidelberg ... [more]
RPPH_SALG21.684e-2035.80RNA pyrophosphohydrolase OS=Salmonella gallinarum ... [more]
RPPH_SALEP1.684e-2035.80RNA pyrophosphohydrolase OS=Salmonella enteritidis... [more]
RPPH_SALDC1.684e-2035.80RNA pyrophosphohydrolase OS=Salmonella dublin (str... [more]
RPPH_SALCH1.684e-2035.80RNA pyrophosphohydrolase OS=Salmonella choleraesui... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-015-H11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756985 ID=EY756985; Name=EY756985; organism=Citrus sinensis; type=EST; length=873bp
CCACGCGTCCGCGACGCGTAAAATGGCTGTAACTGGAGTGAGCGGAAATT
CCCTGTTTTATCGGGTGGTGGTAAGTCAGAGTTACCCTACGAAGTTGGTT
AAATTTGCGAGTGTGCCACTGGAGCTGCAGCAGCTGCCACGTAAGCCCTT
GTGCTGTTCCTGTGATGATTCTTCTTCATCGTTATCTTCTTTTACGGCTT
TATCTACGGAGACGCCGCCAGATGGGTATAGAAGAAATGTCGGGATTTGT
CTCATTAATTCTTCTAAAAAGAAAATCTTTGCAGCTACGAGAATACACAT
ACCATATACATGGCAAATGCCTCAGGGCGGTGCTGATGAGGGTGAGGATT
TGATAAATGCAGCTCTACGAGAATTAAGAGAAGAAACTGGGGTTACTTCA
GCAGAATTTCTTGCAGAGACACCTTATTGGCTGACCTATGATTTCCCACT
TAAAGTCAAACAAAAACTTAATCGTCGGTGGGGAACAAATTATAAAGGTC
AAGCACAGAAGTGGTTTCTTTTCAAGTTCACTGGAAAGGAGGAAGAGATC
AATCTGTTGGGCGATGGATCAGAAAAGCCAGAGTTCAATGAGTGGAAGTG
GATGTTTCCCGAACAAGTTTTAGAGCGAGCTGTGGATTTCAAGAAGCCAG
TCTATGAACAAGTTTTGAAGATATTTAGTCCTTATATTTTGACGGACGCT
GATGAAAGAATTGNTTTGAACGGACGAAGGCCATATTAATTTCANGGCGA
CAGGCAGAAATTTTACACATTGAAAACATGAAGGGGACTAAATTATTTTG
TGACTTCTTGGGGTGTCTTGAATTGCTTGGACTCTGATCCGGAAGTGATT
ATGCCCATCCTTTTTGGATTTGG
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