EY756985

Overview
NameEY756985
Unique NameEY756985
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: RPPH_PROMH (RNA pyrophosphohydrolase OS=Proteus mirabilis (strain HI4320) GN=rppH PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.835e-22
Identity = 60/161 (37.27%), Postives = 91/161 (56.52%), Query Frame = 2
Query:  221 DGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGVT--SAEFLAETPYWLTYDFPLKVKQKLNRRWGTNYK--GQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVLKIFSPYIL 691
            DGYR NVGI + N   + ++A  R +  ++WQ PQGG + GE    A  REL EE G++    + LA T  WL Y  P ++      RW T     GQ Q+WFL + T  +++IN+    S+ PEF+ W+W+     + + V FK+ VY +V+K F+P ++
Sbjct:    5 DGYRPNVGIVICNRQGQVLWA--RRYGQHSWQFPQGGINPGESPEQAMYRELFEEVGLSRKDVKILASTRNWLRYKLPKRLV-----RWDTKPVCIGQKQRWFLLQLTSNDKDINV--QQSKTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFAPVVM 156          
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: RPPH_BORPE (RNA pyrophosphohydrolase OS=Bordetella pertussis GN=rppH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.927e-22
Identity = 58/151 (38.41%), Postives = 81/151 (53.64%), Query Frame = 2
Query:  221 DGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGV--TSAEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVL 667
            +GYR NVGI L+N  K ++F   RI   + WQ PQGG   GE  + A  REL EE G+       L  T  WL Y+ P      + R W  +YKGQ Q WFL +  G++ ++ L    ++ PEF+ W+W      L+  ++FK+ VY Q L
Sbjct:    5 EGYRPNVGIILVNG-KNEVFWGKRIR-EHAWQFPQGGIKYGESPVQAMYRELHEEVGLKPEHVRILGRTRDWLRYNVP---DHFVRREWRGHYKGQKQIWFLLRLVGRDSDVCL--RATQHPEFDAWRWSQYWVPLDAVIEFKRDVYTQAL 148          
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: RPPH_BORPA (RNA pyrophosphohydrolase OS=Bordetella parapertussis GN=rppH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.927e-22
Identity = 58/151 (38.41%), Postives = 81/151 (53.64%), Query Frame = 2
Query:  221 DGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGV--TSAEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVL 667
            +GYR NVGI L+N  K ++F   RI   + WQ PQGG   GE  + A  REL EE G+       L  T  WL Y+ P      + R W  +YKGQ Q WFL +  G++ ++ L    ++ PEF+ W+W      L+  ++FK+ VY Q L
Sbjct:    5 EGYRPNVGIILVNG-KNEVFWGKRIR-EHAWQFPQGGIKYGESPVQAMYRELHEEVGLKPEHVRILGRTRDWLRYNVP---DHFVRREWRGHYKGQKQIWFLLRLVGRDSDVCL--RATQHPEFDAWRWSQYWVPLDAVIEFKRDVYTQAL 148          
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: RPPH_BORBR (RNA pyrophosphohydrolase OS=Bordetella bronchiseptica GN=rppH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.927e-22
Identity = 58/151 (38.41%), Postives = 81/151 (53.64%), Query Frame = 2
Query:  221 DGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGV--TSAEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVL 667
            +GYR NVGI L+N  K ++F   RI   + WQ PQGG   GE  + A  REL EE G+       L  T  WL Y+ P      + R W  +YKGQ Q WFL +  G++ ++ L    ++ PEF+ W+W      L+  ++FK+ VY Q L
Sbjct:    5 EGYRPNVGIILVNG-KNEVFWGKRIR-EHAWQFPQGGIKYGESPVQAMYRELHEEVGLKPEHVRILGRTRDWLRYNVP---DHFVRREWRGHYKGQKQIWFLLRLVGRDSDVCL--RATQHPEFDAWRWSQYWVPLDAVIEFKRDVYTQAL 148          
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: RPPH_XANOR (RNA pyrophosphohydrolase OS=Xanthomonas oryzae pv. oryzae GN=rppH PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.166e-21
Identity = 62/157 (39.49%), Postives = 86/157 (54.78%), Query Frame = 2
Query:  218 PDGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGV--TSAEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVLKIFSP 682
            PDG+R NVGI L+    + +F A R+     WQ PQGG +  E  + A  RELREETG+     E L  TP WL Y  P +  ++  R+      GQ Q WFL +FTG E  + L  D ++ PEF+ W+W+     +E  V FK+ VY + L+  +P
Sbjct:    4 PDGFRPNVGIVLMRQDGQ-VFWARRVRRD-GWQFPQGGMNTDETPVEAMYRELREETGLLPEHVELLGATPGWLRYRLPSRAVRRNERQVCI---GQKQVWFLLRFTGDESHLKL--DHTDTPEFDHWRWVDFWYPVEHVVMFKRGVYARALRHLAP 153          
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: RPPH_XANOM (RNA pyrophosphohydrolase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=rppH PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.166e-21
Identity = 62/157 (39.49%), Postives = 86/157 (54.78%), Query Frame = 2
Query:  218 PDGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGV--TSAEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVLKIFSP 682
            PDG+R NVGI L+    + +F A R+     WQ PQGG +  E  + A  RELREETG+     E L  TP WL Y  P +  ++  R+      GQ Q WFL +FTG E  + L  D ++ PEF+ W+W+     +E  V FK+ VY + L+  +P
Sbjct:    4 PDGFRPNVGIVLMRQDGQ-VFWARRVRRD-GWQFPQGGMNTDETPVEAMYRELREETGLLPEHVELLGATPGWLRYRLPSRAVRRNERQVCI---GQKQVWFLLRFTGDESHLKL--DHTDTPEFDHWRWVDFWYPVEHVVMFKRGVYARALRHLAP 153          
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: RPPH_PSEA6 (RNA pyrophosphohydrolase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=rppH PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.166e-21
Identity = 60/156 (38.46%), Postives = 87/156 (55.77%), Query Frame = 2
Query:  221 DGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGV--TSAEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVLKIFSP 682
            +G+R NVGI + NS  +  +A  R +  ++WQ PQGG DEGE       REL EE G+     + LA T  WL Y  P   K+ + +       GQ QKWFL + T KE++++LL  G   PEF++W+W+     +   V FK+ VY + +K F+P
Sbjct:    5 EGFRANVGIVICNSLGQVFWA--RRYGQHSWQFPQGGIDEGETAEQTMYRELYEEVGLKPEHVKILAVTKNWLRYKLP---KRLIRQGSAPVCIGQKQKWFLLQLTCKEQDVDLLQSG--HPEFDDWRWVSFWYPVRNVVSFKREVYRRAMKEFAP 153          
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: RPPH_AGRT5 (RNA pyrophosphohydrolase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=rppH PE=3 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.166e-21
Identity = 62/159 (38.99%), Postives = 85/159 (53.46%), Query Frame = 2
Query:  227 YRRNVGICLINSSKKKIFAATRIH--------IPYTWQMPQGGADEGEDLINAALRELREETGVTSAEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINL-LGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVLKIF 676
            YR   GI ++N+ +  ++A  RI          P  WQMPQGG D+GE  + AA+REL EETG+ +   LAE   W+ YD P    + +       Y+GQAQ+WF F+F G E EI +         EF+ W W   E + E  V FK+ VYE+V+  F
Sbjct:   10 YRPCAGIMVLNA-QGLVWAGRRIKEGNSEYDGSPQLWQMPQGGIDDGERPLTAAIRELYEETGMKTVTLLAEASDWIHYDLP---PELIGIGLRGKYRGQAQRWFAFRFEGDESEIQIDPPPTGHSAEFDAWDWKPMESLPELIVPFKRAVYEKVVAEF 164          
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: RPPH_XANC5 (RNA pyrophosphohydrolase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=rppH PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.523e-21
Identity = 62/157 (39.49%), Postives = 86/157 (54.78%), Query Frame = 2
Query:  218 PDGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGV--TSAEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVLKIFSP 682
            PDG+R NVGI L+    + +F A R+     WQ PQGG +  E  + A  RELREETG+     E L  TP WL Y  P +  ++  R+      GQ Q WFL +FTG E  + L  D ++ PEF+ W+W+     +E  V FK+ VY + L+  +P
Sbjct:    4 PDGFRPNVGIVLMRQDGQ-VFWARRVRRD-GWQFPQGGMNTDETPVEAMYRELREETGLLPEHVELLGATPGWLRYRLPSRAVRRNERQVCI---GQKQVWFLLQFTGDESHLKL--DHTDTPEFDHWRWVDFWYPVEHVVMFKRGVYARALRHLAP 153          
BLAST of EY756985 vs. ExPASy Swiss-Prot
Match: RPPH_XANAC (RNA pyrophosphohydrolase OS=Xanthomonas axonopodis pv. citri GN=rppH PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.523e-21
Identity = 62/157 (39.49%), Postives = 86/157 (54.78%), Query Frame = 2
Query:  218 PDGYRRNVGICLINSSKKKIFAATRIHIPYTWQMPQGGADEGEDLINAALRELREETGV--TSAEFLAETPYWLTYDFPLKVKQKLNRRWGTNYKGQAQKWFLFKFTGKEEEINLLGDGSEKPEFNEWKWMFPEQVLERAVDFKKPVYEQVLKIFSP 682
            PDG+R NVGI L+    + +F A R+     WQ PQGG +  E  + A  RELREETG+     E L  TP WL Y  P +  ++  R+      GQ Q WFL +FTG E  + L  D ++ PEF+ W+W+     +E  V FK+ VY + L+  +P
Sbjct:    4 PDGFRPNVGIVLMRQDGQ-VFWARRVRRD-GWQFPQGGMNTDETPVEAMYRELREETGLLPEHVELLGATPGWLRYRLPSRAVRRNERQVCI---GQKQVWFLLQFTGDESHLKL--DHTDTPEFDHWRWVDFWYPVEHVVMFKRGVYARALRHLAP 153          
The following BLAST results are available for this feature:
BLAST of EY756985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 325
Match NameE-valueIdentityDescription
RPPH_PROMH6.835e-2237.27RNA pyrophosphohydrolase OS=Proteus mirabilis (str... [more]
RPPH_BORPE8.927e-2238.41RNA pyrophosphohydrolase OS=Bordetella pertussis G... [more]
RPPH_BORPA8.927e-2238.41RNA pyrophosphohydrolase OS=Bordetella parapertuss... [more]
RPPH_BORBR8.927e-2238.41RNA pyrophosphohydrolase OS=Bordetella bronchisept... [more]
RPPH_XANOR1.166e-2139.49RNA pyrophosphohydrolase OS=Xanthomonas oryzae pv.... [more]
RPPH_XANOM1.166e-2139.49RNA pyrophosphohydrolase OS=Xanthomonas oryzae pv.... [more]
RPPH_PSEA61.166e-2138.46RNA pyrophosphohydrolase OS=Pseudoalteromonas atla... [more]
RPPH_AGRT51.166e-2138.99RNA pyrophosphohydrolase OS=Agrobacterium tumefaci... [more]
RPPH_XANC51.523e-2139.49RNA pyrophosphohydrolase OS=Xanthomonas campestris... [more]
RPPH_XANAC1.523e-2139.49RNA pyrophosphohydrolase OS=Xanthomonas axonopodis... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-015-H11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756985 ID=EY756985; Name=EY756985; organism=Citrus sinensis; type=EST; length=873bp
CCACGCGTCCGCGACGCGTAAAATGGCTGTAACTGGAGTGAGCGGAAATT
CCCTGTTTTATCGGGTGGTGGTAAGTCAGAGTTACCCTACGAAGTTGGTT
AAATTTGCGAGTGTGCCACTGGAGCTGCAGCAGCTGCCACGTAAGCCCTT
GTGCTGTTCCTGTGATGATTCTTCTTCATCGTTATCTTCTTTTACGGCTT
TATCTACGGAGACGCCGCCAGATGGGTATAGAAGAAATGTCGGGATTTGT
CTCATTAATTCTTCTAAAAAGAAAATCTTTGCAGCTACGAGAATACACAT
ACCATATACATGGCAAATGCCTCAGGGCGGTGCTGATGAGGGTGAGGATT
TGATAAATGCAGCTCTACGAGAATTAAGAGAAGAAACTGGGGTTACTTCA
GCAGAATTTCTTGCAGAGACACCTTATTGGCTGACCTATGATTTCCCACT
TAAAGTCAAACAAAAACTTAATCGTCGGTGGGGAACAAATTATAAAGGTC
AAGCACAGAAGTGGTTTCTTTTCAAGTTCACTGGAAAGGAGGAAGAGATC
AATCTGTTGGGCGATGGATCAGAAAAGCCAGAGTTCAATGAGTGGAAGTG
GATGTTTCCCGAACAAGTTTTAGAGCGAGCTGTGGATTTCAAGAAGCCAG
TCTATGAACAAGTTTTGAAGATATTTAGTCCTTATATTTTGACGGACGCT
GATGAAAGAATTGNTTTGAACGGACGAAGGCCATATTAATTTCANGGCGA
CAGGCAGAAATTTTACACATTGAAAACATGAAGGGGACTAAATTATTTTG
TGACTTCTTGGGGTGTCTTGAATTGCTTGGACTCTGATCCGGAAGTGATT
ATGCCCATCCTTTTTGGATTTGG
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