EY756984

Overview
NameEY756984
Unique NameEY756984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756984 vs. ExPASy Swiss-Prot
Match: RL15_SYNP2 (50S ribosomal protein L15 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rplO PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.487e-27
Identity = 73/149 (48.99%), Postives = 87/149 (58.39%), Query Frame = 3
Query:  147 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 593
            +L+NL P+ GS          IAAGQG SCGFGMRGQKSRSG G + GFEGGQMPLYRR+PKL+                 L D+ A       EV+LE+L   G++  +      PLK+LGDGELS  L   A AFS  AK K+EAAG
Sbjct:    2 KLSNLSPKAGSKKRRRRVGRGIAAGQGASCGFGMRGQKSRSGTGTKAGFEGGQMPLYRRVPKLKHFTIVNPKNFTIVNVGQLTDLPA-----NTEVTLESLMAAGIVTTNDG----PLKVLGDGELSVALKVTAAAFSNGAKAKIEAAG 141          
BLAST of EY756984 vs. ExPASy Swiss-Prot
Match: RL15_ANAVT (50S ribosomal protein L15 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rplO PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.943e-27
Identity = 73/155 (47.10%), Postives = 93/155 (60.00%), Query Frame = 3
Query:  147 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 611
            RLN++ PQ GS          I+AGQG S G GMRGQKSRSG G R GFEGGQ PLYRRIPKL+G           Y  +N++ +  A      EV+LE+L+  G++       K PLK+LG+G+L   LN KA AF+  A+ K+EAAG +  VL
Sbjct:    2 RLNDVKPQKGSKKRRRRVGRGISAGQGASAGLGMRGQKSRSGSGTRPGFEGGQQPLYRRIPKLKGFP---VVNRKIYTTINVEKL--ADLPANTEVTLESLRASGILTAV----KGPLKVLGNGDLGVALNVKAAAFTGQARSKIEAAGGSCEVL 147          
BLAST of EY756984 vs. ExPASy Swiss-Prot
Match: RL15_PROM2 (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain MIT 9215) GN=rplO PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.313e-27
Identity = 72/148 (48.65%), Postives = 92/148 (62.16%), Query Frame = 3
Query:  150 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 593
            LN L    GS          IAAGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+PKL+            +  +NL+ +    F + D V++++L KKGLI     + K PLKILG+G+++ KL  +A AF+  AK+K+EAAG
Sbjct:    5 LNTLKSNSGSRKKKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNFSIINLEKLN--DFKDNDTVNIDSLVKKGLI----FKPKFPLKILGNGKINVKLKVQAHAFTKVAKQKIEAAG 143          
BLAST of EY756984 vs. ExPASy Swiss-Prot
Match: RL15_PROMM (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain MIT 9313) GN=rplO PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.652e-27
Identity = 73/161 (45.34%), Postives = 94/161 (58.39%), Query Frame = 3
Query:  147 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKD---IEAAGFLE---GDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 611
            RL++L    G+          IAAGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+PKL+            +  VN K+   +  A   E   G  ++L+TL K G++       K PLK+LG+GEL  KL  +A AF+ +A+ K+EAAG T  +L
Sbjct:    5 RLDSLKANVGARRRKMRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK-----------HFTTVNSKEFTVVNVAALNELKAGSTINLDTLVKNGVVT----SPKYPLKVLGNGELKVKLTIQAAAFTATARSKIEAAGGTCEIL 150          
BLAST of EY756984 vs. ExPASy Swiss-Prot
Match: RL15_PROM0 (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain MIT 9301) GN=rplO PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.652e-27
Identity = 73/148 (49.32%), Postives = 91/148 (61.49%), Query Frame = 3
Query:  150 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 593
            LN L    GS          IAAGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+PKL+            +  +NL+ +    F + D V+L++L KKGLI     + K PLKILG+G+L+ KL  +A AF+  AK+K+E AG
Sbjct:    5 LNTLKSNSGSRKKKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNFSIINLEKLN--DFKDNDTVNLDSLVKKGLI----FKPKFPLKILGNGKLNVKLKVQAHAFTKVAKQKIEDAG 143          
BLAST of EY756984 vs. ExPASy Swiss-Prot
Match: RL15_SYNPW (50S ribosomal protein L15 OS=Synechococcus sp. (strain WH7803) GN=rplO PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.382e-27
Identity = 74/152 (48.68%), Postives = 91/152 (59.87%), Query Frame = 3
Query:  147 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLE-GDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCT 599
            RL +L    G+          IAAGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+PKL+      H  L       + ++ A   L+ G  VSL++L K G++       K PLKILG+GEL  KL  +A AF+ SA+ K+EAAG T
Sbjct:    4 RLESLKSNKGARRRKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLVNPKQFTVVNVSALNDLKAGSTVSLDSLVKDGIVT----SPKHPLKILGNGELKTKLTVQAAAFTASARTKIEAAGGT 145          
BLAST of EY756984 vs. ExPASy Swiss-Prot
Match: RL15_SYNJB (50S ribosomal protein L15 OS=Synechococcus sp. GN=rplO PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.259e-26
Identity = 71/155 (45.81%), Postives = 94/155 (60.65%), Query Frame = 3
Query:  147 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 611
            RL ++ PQ GS          ++AGQG SCG GMRGQK+R G   R GFEGGQ PLYRR+PKL+      +    +Y  VNL+ +  A    G EVSLE+L ++G++  +      PLKILGDGE+S  L  +A A + SAK K+EAAG  + +L
Sbjct:    2 RLEDIRPQAGSTRRRRRLGRGVSAGQGASCGKGMRGQKARKGGSTRPGFEGGQTPLYRRLPKLKHFP--RYRRRLEYTLVNLRAL--ADLPAGSEVSLESLMERGIVTTNDG----PLKILGDGEVSVPLTIRAAAITASAKVKVEAAGGRVEIL 148          
BLAST of EY756984 vs. ExPASy Swiss-Prot
Match: RL15_PROMP (50S ribosomal protein L15 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=rplO PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.259e-26
Identity = 75/155 (48.39%), Postives = 93/155 (60.00%), Query Frame = 3
Query:  150 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETL-KKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 611
            LN L    GS          IAAGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+PKL+            +  VNL  +  + F E + V++++L KKK L  P     K PLKILG+GE+  KL  +A AF+  AKEK+EAAG +  ++
Sbjct:    5 LNTLKSNTGSRKKKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNFSIVNLSKL--SEFKESEVVNIDSLVKKKLLFKP-----KFPLKILGNGEVKVKLKVQAHAFTKVAKEKIEAAGGSCEII 149          
BLAST of EY756984 vs. ExPASy Swiss-Prot
Match: RL15_PROM9 (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain MIT 9312) GN=rplO1 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.644e-26
Identity = 73/154 (47.40%), Postives = 94/154 (61.04%), Query Frame = 3
Query:  150 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 611
            LN L    GS          IAAGQG SCGFGMRGQKSRSG   R GFEGGQMPLYRR+PKL+            +  +NL  ++   F + D V+L++L KKGLI     + K PLKILG+G+++ KL  +A AF+  AK+K+E AG +  +L
Sbjct:    5 LNTLKSNSGSRKKKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNFSIINLDKLK--DFNDNDTVNLDSLVKKGLI----FKPKFPLKILGNGKVNVKLTVQAHAFTKVAKQKIEDAGGSCELL 149          
BLAST of EY756984 vs. ExPASy Swiss-Prot
Match: RL15_NOSP7 (50S ribosomal protein L15 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rplO PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.805e-26
Identity = 72/155 (46.45%), Postives = 93/155 (60.00%), Query Frame = 3
Query:  147 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 611
            RL+++ PQ GS          I+AGQG S G GMRGQKSRSG G R GFEGGQ PLYRR+PKL+G           Y  +N++ +  A      EV+L +LK  G++       K PLKILG+GELS  L  +A AF+ +A+ K+EAAG +  VL
Sbjct:    2 RLHDVKPQKGSKKRKKRVARGISAGQGASAGLGMRGQKSRSGSGTRPGFEGGQQPLYRRLPKLKGFP---IVNQKIYTTINVEKL--ASLPANTEVTLASLKAAGILTAV----KGPLKILGNGELSTPLKVQAAAFTGTARSKIEAAGGSCEVL 147          
The following BLAST results are available for this feature:
BLAST of EY756984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL15_SYNP21.487e-2748.9950S ribosomal protein L15 OS=Synechococcus sp. (st... [more]
RL15_ANAVT1.943e-2747.1050S ribosomal protein L15 OS=Anabaena variabilis (... [more]
RL15_PROM23.313e-2748.6550S ribosomal protein L15 OS=Prochlorococcus marin... [more]
RL15_PROMM5.652e-2745.3450S ribosomal protein L15 OS=Prochlorococcus marin... [more]
RL15_PROM05.652e-2749.3250S ribosomal protein L15 OS=Prochlorococcus marin... [more]
RL15_SYNPW7.382e-2748.6850S ribosomal protein L15 OS=Synechococcus sp. (st... [more]
RL15_SYNJB1.259e-2645.8150S ribosomal protein L15 OS=Synechococcus sp. GN=... [more]
RL15_PROMP1.259e-2648.3950S ribosomal protein L15 OS=Prochlorococcus marin... [more]
RL15_PROM91.644e-2647.4050S ribosomal protein L15 OS=Prochlorococcus marin... [more]
RL15_NOSP72.805e-2646.4550S ribosomal protein L15 OS=Nostoc punctiforme (s... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-015-H10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756984 ID=EY756984; Name=EY756984; organism=Citrus sinensis; type=EST; length=898bp
CCACGCGTCCGCCCCCATCAAGCCTTTGCGTCCCTCTCAAAGTCCAACAA
AGAAATAAACCACCCCAGCTCACTGTCTTAAACCAAGCTGCTTCGGCTTC
TGCTTCAGCAACTGTTGGTTCGGGTCCCGTTACGAATGTACGGTTCCGGT
TAAATAACCTGGGCCCACAACCGGGTTCGAGAAAGAGAGGGAAGAGAAAG
GGGAGAGGAATAGCAGCTGGGCAAGGTAACAGCTGTGGGTTTGGAATGAG
AGGTCAGAAATCGAGGTCTGGTCCTGGCGTTAGAAAGGGTTTTGAAGGTG
GTCAAATGCCTCTTTATCGTCGAATTCCTAAGCTCCGTGGGATTGCCGGA
GGTATGCATGCTGGGTTACCTAAGTATGTCCCTGTTAACTTGAAAGACAT
AGAAGCAGCTGGTTTTCTAGAGGGGGATGAAGTCTCACTAGAGACTTTGA
AGAAGAAGGGCTTGATCAATCCCTCAGGAAGAGAAAGGAAACTGCCTTTA
AAGATTCTTGGTGATGGAGAATTAAGCAAGAAGCTGAACTTCAAGGCTCG
TGCCTTCTCTACATCAGCAAAGGAGAAGCTTGAAGCTGCAGGCTGTACCC
TCACTGTCTTACCTGGCCGAAAGAAGTGGGTGAAACCATCAGTAGCTAAG
AACCTTGCACGAGCTGAAGAATACTTCGCCAAGAAGAGAGCTGCTGCAGC
TGCATCCGATTCAACTTCAGCTTGAACCACTTGGTTTTTTTCACTCACTG
TAACTAAGTAGAGCCATTGGATTGTCTTCGATTCTTTTTCTCTGGNTTTA
AGTTTTCGGGGTACCGAAATGAGAGGAGGATGTCTATAGCTGTAATTTCC
TGGAATTGGTCTCTCCTTTGTATCCCCTCCCTTTTAAAAATCAGCTAA
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