EY756977

Overview
NameEY756977
Unique NameEY756977
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length486
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756977 vs. ExPASy Swiss-Prot
Match: DXS_BRUA1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus (strain S19) GN=dxs PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 4.317e-39
Identity = 84/157 (53.50%), Postives = 108/157 (68.79%), Query Frame = 2
Query:   14 LREAAKSITKQIGGQTHEVAAKVDEYARGLISASGSTFFEELGLYYIGPVDGHNVEDLVTIFQRVKEMPAPGPVLIHVVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLSYTQYFAESLITEAETDDKIVAIHAAMGGGTGLNYFQKRF 484
            +REAAK + +++     + A K +EYAR   +  G T FEELG YY+GP+DGHN++ L+ + + V++    GPVLIHVVT+KGKGY PAEAAAD+ HGV KFD  TGKQ K  +   SYT+ F  SLI EA  DDKIVA+ AAM  GTGL+ F + F
Sbjct:  206 VREAAKQVAQKLPKFLQDKARKSEEYARAFFT--GGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDTQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPPANAPSYTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAF 359          
BLAST of EY756977 vs. ExPASy Swiss-Prot
Match: DXS_SPHAL (1-deoxy-D-xylulose-5-phosphate synthase OS=Sphingopyxis alaskensis GN=dxs PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 7.364e-39
Identity = 83/156 (53.21%), Postives = 105/156 (67.31%), Query Frame = 2
Query:   11 ELREAAKSITKQIGGQTHEVAAKVDEYARGLISASGSTFFEELGLYYIGPVDGHNVEDLVTIFQRVKEMPAPGPVLIHVVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLSYTQYFAESLITEAETDDKIVAIHAAMGGGTGLNYFQK 478
            ELRE A+   +++    H+ A K DEYARG+  A G T FEELG YY+GP+DGHN++ L+ I + V++    GPVLIH VT+KGKGY PAEAAAD+ HGV KFD  TG+Q K      +Y   F E+L   AETD +IVAI AAM  GTG++ F K
Sbjct:  206 ELREIARRFARKLPEPLHKAAKKTDEYARGM--AMGGTLFEELGFYYVGPIDGHNLDHLIPILENVRDSDH-GPVLIHAVTKKGKGYAPAEAAADKYHGVQKFDVITGEQAKAPPGPPAYQNVFGETLAKLAETDKRIVAITAAMPSGTGVDKFAK 358          
BLAST of EY756977 vs. ExPASy Swiss-Prot
Match: DXS_MESSB (1-deoxy-D-xylulose-5-phosphate synthase OS=Mesorhizobium sp. (strain BNC1) GN=dxs PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 7.364e-39
Identity = 79/157 (50.32%), Postives = 108/157 (68.79%), Query Frame = 2
Query:   14 LREAAKSITKQIGGQTHEVAAKVDEYARGLISASGSTFFEELGLYYIGPVDGHNVEDLVTIFQRVKEMPAPGPVLIHVVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLSYTQYFAESLITEAETDDKIVAIHAAMGGGTGLNYFQKRF 484
            +R+  K +T  +G        +  E+ARG ++  G T FEE+G ++IGP+DGH++E LV + + V++    GPVLIHVVT+KGKGYPPAEAAAD+ HGV KFD  TG Q K+ +   SYT+ FA++L+ EA  D +IVAI AAM  GTGL+ F+K F
Sbjct:  220 IRDVGKKLTSHLGKSFDRAITRAVEHARGFVT--GGTLFEEMGFFHIGPIDGHDLEALVPVLRNVRDN-GTGPVLIHVVTQKGKGYPPAEAAADKYHGVAKFDVITGAQAKSPAGAPSYTKVFAQALVQEAREDKRIVAITAAMPSGTGLDLFEKEF 373          
BLAST of EY756977 vs. ExPASy Swiss-Prot
Match: DXS_BRASO (1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium sp. (strain ORS278) GN=dxs PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 7.364e-39
Identity = 79/157 (50.32%), Postives = 107/157 (68.15%), Query Frame = 2
Query:   14 LREAAKSITKQIGGQTHEVAAKVDEYARGLISASGSTFFEELGLYYIGPVDGHNVEDLVTIFQRVKEMPAPGPVLIHVVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLSYTQYFAESLITEAETDDKIVAIHAAMGGGTGLNYFQKRF 484
            LR+AAK + + +       A++V+EY+RG +   G T FEELG YY+GP+DGHN++ L+ + + V++M   GP+L+HVVT+KGKGY PAEAAAD+ H V KFD  TG Q K K    +Y   F +SL+ EAE D+KIV I AAM  GTG++ F K F
Sbjct:  207 LRDAAKQLGQHLPKVIANRASRVEEYSRGFMM-DGGTLFEELGFYYVGPIDGHNLDHLLPVLKNVRDMET-GPILVHVVTQKGKGYSPAEAAADKYHAVAKFDIATGTQAKAKPNAPAYQNVFGQSLVKEAEKDEKIVGITAAMPSGTGIDIFAKAF 361          
BLAST of EY756977 vs. ExPASy Swiss-Prot
Match: DXS_RHILO (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium loti GN=dxs PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 9.618e-39
Identity = 82/157 (52.23%), Postives = 107/157 (68.15%), Query Frame = 2
Query:   14 LREAAKSITKQIGGQTHEVAAKVDEYARGLISASGSTFFEELGLYYIGPVDGHNVEDLVTIFQRVKEMPAPGPVLIHVVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLSYTQYFAESLITEAETDDKIVAIHAAMGGGTGLNYFQKRF 484
            LR+  K +T  +G +      +  E+ARG ++  G T FEELG Y+IGP+DGHN+E L+ + + V++    GPVLIHVVT+KGKGY PAEAAAD+ HGV KFD  TG Q K  +   +YT+ FAESLI EA  DD+IVA+ AAM  GTGL+ F + F
Sbjct:  207 LRDFGKKLTSYLGKRADRAITRAVEHARGYVT--GGTLFEELGFYHIGPIDGHNLEHLIPVLKNVRDN-GEGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAPANAPAYTKVFAESLIREAREDDRIVAVTAAMPSGTGLDLFGEVF 360          
BLAST of EY756977 vs. ExPASy Swiss-Prot
Match: DXS_CAUSK (1-deoxy-D-xylulose-5-phosphate synthase OS=Caulobacter sp. (strain K31) GN=dxs PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 9.618e-39
Identity = 78/158 (49.37%), Postives = 110/158 (69.62%), Query Frame = 2
Query:   11 ELREAAKSITKQIGGQTHEVAAKVDEYARGLISASGSTFFEELGLYYIGPVDGHNVEDLVTIFQRVKEMPAPGPVLIHVVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLSYTQYFAESLITEAETDDKIVAIHAAMGGGTGLNYFQKRF 484
            ++R+  K++ +++     + A K +EYARG+++  G TFFEELG +Y+GP+DGH+++ LV++   VK      PVL+HVVT+KGKGY PAE AAD++H VVKFD  TG+Q K  +   SYT+ FA+ LI  A  DDKI+AI AAM  GTGL+ F K +
Sbjct:  204 KVRKLGKTVVEKLPTPIRDAARKAEEYARGMVT--GGTFFEELGFHYVGPIDGHDMDALVSVLNNVKHFDEK-PVLVHVVTQKGKGYAPAEGAADKLHAVVKFDVVTGQQHKAAAGPPSYTKVFAQELIKHAAVDDKIMAITAAMPSGTGLDLFGKAY 358          
BLAST of EY756977 vs. ExPASy Swiss-Prot
Match: DXS_NOVAD (1-deoxy-D-xylulose-5-phosphate synthase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=dxs PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.256e-38
Identity = 79/155 (50.97%), Postives = 106/155 (68.39%), Query Frame = 2
Query:   14 LREAAKSITKQIGGQTHEVAAKVDEYARGLISASGSTFFEELGLYYIGPVDGHNVEDLVTIFQRVKEMPAPGPVLIHVVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLSYTQYFAESLITEAETDDKIVAIHAAMGGGTGLNYFQK 478
            LR+ A+ +++++    HE A K DE+ARG+  A G T FEELG YY+GP+DGHN++ L+ + + V++  A GP LIHVVT+KGKGY PAEAAAD+ HGV KFD  TG+Q K K+   +Y   F E+L   A+ D  I AI AAM  GTG++ F K
Sbjct:  207 LRDIARRLSRKLPRPLHEAARKTDEFARGM--AMGGTLFEELGFYYVGPIDGHNIDQLIPVLENVRDA-AEGPCLIHVVTQKGKGYAPAEAAADKYHGVQKFDVITGEQVKAKAAAPAYQNVFGETLAKLADADPTICAITAAMPSGTGVDKFAK 358          
BLAST of EY756977 vs. ExPASy Swiss-Prot
Match: DXS_BART1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=dxs PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.641e-38
Identity = 80/157 (50.96%), Postives = 111/157 (70.70%), Query Frame = 2
Query:   14 LREAAKSITKQIGGQTHEVAAKVDEYARGLISASGSTFFEELGLYYIGPVDGHNVEDLVTIFQRVKEMPAPGPVLIHVVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLSYTQYFAESLITEAETDDKIVAIHAAMGGGTGLNYFQKRF 484
            LRE  K +++++     + A + +E+ARGL+   G T F+ELG YY+GP+DGHN+  L+ + + V+E P  GPVL+HVVT KGKGYPPAEA++D+ HGV +FD  TGKQ K  S  L YT+ F+++L+ EA  DDKIV I AAM  GTGL+ F ++F
Sbjct:  207 LRERVKMLSEKLPKFFWDKARRSEEFARGLLV--GGTLFDELGFYYVGPIDGHNLGHLLPVLKNVREYPH-GPVLVHVVTHKGKGYPPAEASSDKYHGVNRFDVTTGKQVKASSNILPYTKVFSKALVEEACHDDKIVGITAAMPTGTGLDSFAEKF 360          
BLAST of EY756977 vs. ExPASy Swiss-Prot
Match: DXS_SPHWW (1-deoxy-D-xylulose-5-phosphate synthase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=dxs PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 2.143e-38
Identity = 82/157 (52.23%), Postives = 108/157 (68.79%), Query Frame = 2
Query:   14 LREAAKSITKQIGGQTHEVAAKVDEYARGLISASGSTFFEELGLYYIGPVDGHNVEDLVTIFQRVKEMPAPGPVLIHVVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLSYTQYFAESLITEAETDDKIVAIHAAMGGGTGLNYFQKRF 484
            +R  AK + +++    H+ A + +EYARG+  A+G T FEELG YY+GPVDGHN++ L+ I + V++    GP+LIHVVT KGKGY PAEAAAD+ HGV KFD  +G Q K      SYT  FA++L+ EA+ DD+I AI AAM  GTGL+ F K F
Sbjct:  207 MRGFAKRVAQKLPRPIHDFAKRSEEYARGM--ATGGTLFEELGFYYVGPVDGHNLDHLLPILENVRDGDH-GPILIHVVTNKGKGYAPAEAAADKYHGVQKFDVVSGVQAKAPPGPPSYTGVFADALVAEAKRDDRICAITAAMPSGTGLDKFGKAF 360          
BLAST of EY756977 vs. ExPASy Swiss-Prot
Match: DXS_GLUOX (1-deoxy-D-xylulose-5-phosphate synthase OS=Gluconobacter oxydans GN=dxs PE=3 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 3.655e-38
Identity = 74/157 (47.13%), Postives = 106/157 (67.52%), Query Frame = 2
Query:   14 LREAAKSITKQIGGQTHEVAAKVDEYARGLISASGSTFFEELGLYYIGPVDGHNVEDLVTIFQRVKEMPAPGPVLIHVVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLSYTQYFAESLITEAETDDKIVAIHAAMGGGTGLNYFQKRF 484
            LR+ A  + K++ G+    A + +EYARG+I+  G T FEELG YY+GPV+GH++  LV I + +++    GP+L+H++TEKG+GY PAEAA D+ H V KF+  TG+Q K  +   SYT  F+  L+  A+TDDK++ I AAM  GTGLN F K +
Sbjct:  223 LRDLAGKVAKRLPGKIERTAKRAEEYARGMIT--GGTLFEELGFYYVGPVNGHDMSQLVPILRNLRDADDQGPILLHIITEKGRGYKPAEAAGDKYHAVSKFNVVTGEQKKAPAGPPSYTSIFSRELMRRAKTDDKLITITAAMPSGTGLNAFAKAY 377          
The following BLAST results are available for this feature:
BLAST of EY756977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DXS_BRUA14.317e-3953.501-deoxy-D-xylulose-5-phosphate synthase OS=Brucell... [more]
DXS_SPHAL7.364e-3953.211-deoxy-D-xylulose-5-phosphate synthase OS=Sphingo... [more]
DXS_MESSB7.364e-3950.321-deoxy-D-xylulose-5-phosphate synthase OS=Mesorhi... [more]
DXS_BRASO7.364e-3950.321-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrh... [more]
DXS_RHILO9.618e-3952.231-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobi... [more]
DXS_CAUSK9.618e-3949.371-deoxy-D-xylulose-5-phosphate synthase OS=Cauloba... [more]
DXS_NOVAD1.256e-3850.971-deoxy-D-xylulose-5-phosphate synthase OS=Novosph... [more]
DXS_BART11.641e-3850.961-deoxy-D-xylulose-5-phosphate synthase OS=Bartone... [more]
DXS_SPHWW2.143e-3852.231-deoxy-D-xylulose-5-phosphate synthase OS=Sphingo... [more]
DXS_GLUOX3.655e-3847.131-deoxy-D-xylulose-5-phosphate synthase OS=Glucono... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-015-H03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756977 ID=EY756977; Name=EY756977; organism=Citrus sinensis; type=EST; length=486bp
CCACGCGTCCGAACTTCGTGAAGCCGCAAAAAGCATCACTAAGCAAATTG
GTGGGCAAACACATGAAGTTGCTGCAAAGGTCGATGAGTACGCCAGAGGA
CTGATTAGTGCTTCTGGTTCAACTTTCTTTGAGGAGCTAGGTCTGTACTA
CATTGGTCCAGTGGATGGACACAATGTCGAAGATTTAGTTACTATCTTTC
AGAGAGTGAAAGAAATGCCTGCGCCAGGGCCAGTTCTGATCCATGTTGTA
ACAGAGAAGGGAAAGGGCTATCCCCCAGCGGAGGCAGCAGCTGATAGAAT
GCATGGAGTTGTCAAGTTCGATCCAAAAACTGGCAAGCAATTTAAGACCA
AATCCCCTACGCTCTCGTATACACAGTACTTTGCTGAATCTTTGATAACG
GAAGCTGAGACAGACGATAAGATTGTGGCCATCCACGCTGCAATGGGTGG
TGGTACTGGCCTCAATTATTTCCAGAAAAGGTTTCC
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