EY756928

Overview
NameEY756928
Unique NameEY756928
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756928 vs. ExPASy Swiss-Prot
Match: PNS1_CANGA (Protein PNS1 OS=Candida glabrata GN=PNS1 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.063e-14
Identity = 44/143 (30.77%), Postives = 79/143 (55.24%), Query Frame = 1
Query:   88 FWTGAVLCNTVHVIVSGMVFLVLIHDGRDSVSMPHNPLVKSLRYAVTTSLGSICYGSLFTAAIRTLRWEIR-GIRSKIGNNE------CLLCCVDFLFHLVETLVRFFNKYAYVQIAVYGKGFNRSARDAWELFQSTGVEALV 495
            ++   V+ N +H  VSG VF    +  +    MP  P + + + A+T S GSIC+GSL  + I T R  ++ G ++ I + +       +   +D L   ++ + ++FN YAY  IA+YGK + ++A+  W +F+  G++AL+
Sbjct:  307 YYISEVIRNVMHCTVSG-VFGSWYYRYKSDQGMPKWPAMGAFKRAMTYSFGSICFGSLIVSIIETFRQLLQLGKQAAIASTDNANWIRIIFWLIDMLVGFIQWIAQYFNHYAYCIIALYGKPYLKAAKQTWYMFREKGIDALI 448          
BLAST of EY756928 vs. ExPASy Swiss-Prot
Match: PNS1_NEUCR (Protein PNS1 OS=Neurospora crassa GN=pns-1 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.544e-13
Identity = 51/173 (29.48%), Postives = 78/173 (45.09%), Query Frame = 1
Query:   88 FWTGAVLCNTVHVIVSGMVFLVLIHDGRDSVSMPHNPLVKSLRYAVTTSLGSICYGSLFTAAIRTLRWEIRGIRSKIGNNECLL-----CCVDFLFHLVETLVRFFNKYAYVQIAVYGKGFNRSARDAWELFQSTGVEALVAYDCSGAVLLMGTIVGGLITGTCAXAW-TYTK 588
            +W    L NT+H  V+G+      +       +    L +SL Y    S GSI  GSLF A I  +R   +  +        +L     C    L  +++ LV F N+YA+  IA+YGK +  +A+D W++ +  G++AL+     G VL  G        G  A  +  YTK
Sbjct:  312 YWISEWLKNTIHTTVAGIYGSWYFNSRNYPTKVTRGALKRSLTY----SFGSISLGSLFIAIINLIRQLAQAAQQNAAQEGDILGTILWCIFGCLIGILDWLVEFINRYAFCHIALYGKAYFAAAKDTWKMVKDRGIDALINECLIGPVLTFGATFVAYACGLIAYLYMVYTK 480          
BLAST of EY756928 vs. ExPASy Swiss-Prot
Match: CTL1L_CAEBR (Choline transporter-like protein 1 OS=Caenorhabditis briggsae GN=chtl-1 PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.633e-13
Identity = 55/200 (27.50%), Postives = 91/200 (45.50%), Query Frame = 1
Query:  184 MPHNPLVKSLRYAVTTSLGSICYGSLFTAAIRTLRWEIRGIRSKIGNNE---------CLLCCVDFLFHLVETLVRFFNKYAYVQIAVYGKGFNRSARDAWELFQSTGVEALVAYDCSGAVLLMGTIVGGLITGTCAXAWTYTKWHDR---------------VVMVGSTXXXXXXXXXXXXXXXIESAVTSIYICYAED 711
            +P  P++++L  A+  +LGSI +GSL  A ++ +R  +  I  K+G +E         CL CC    F  +E   +F  K AY+ IA+YGK F  SA+D++ L     V  +V +  +G +L +G  +  L  G  +  +   +W                  +V++GS                 E AV + +IC+ ED
Sbjct:  566 VPTFPVIRALNRAMRYNLGSIAFGSLIIAIVKIIRVMLEYIDHKLGKSENKAVKWFLMCLKCC----FWCLEMFFKFLTKNAYIMIAIYGKNFFSSAKDSFLLITRNIVRTVVVHKVAGILLFLGKAMITLGMGILSFYYFSGRWVVEGVPKVDLYYYFVPIVIVVIGS------YFMADLFFDVYEMAVDTTFICFLED 755          
BLAST of EY756928 vs. ExPASy Swiss-Prot
Match: CTL1L_CAEEL (Choline transporter-like protein 1 OS=Caenorhabditis elegans GN=chtl-1 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.492e-13
Identity = 54/200 (27.00%), Postives = 91/200 (45.50%), Query Frame = 1
Query:  184 MPHNPLVKSLRYAVTTSLGSICYGSLFTAAIRTLRWEIRGIRSKIGNNE---------CLLCCVDFLFHLVETLVRFFNKYAYVQIAVYGKGFNRSARDAWELFQSTGVEALVAYDCSGAVLLMGTIVGGLITGTCAXAWTYTKWHDR---------------VVMVGSTXXXXXXXXXXXXXXXIESAVTSIYICYAED 711
            +P  P++++L  A+  +LGSI +GSL  A ++ +R  +  I  K+G ++         CL CC    F  +E   +F  K AY+ IA+YGK F  SA+D++ L     V  +V +  +G +L +G  +  L  G  +  +   +W                  +V++GS                 E AV + +IC+ ED
Sbjct:  549 VPTFPVIRALNRAIRYNLGSIAFGSLIIAIVKIIRVLLEYIDHKLGKSQNKAVKWFLMCLKCC----FWCLEVFFKFLTKNAYIMIAIYGKNFFSSAKDSFLLITRNIVRTVVVHKVAGILLFLGKSMITLGMGILSFYYFSGRWVVEGVPKVDLYYYFVPIVIVVIGS------YFMADLFFDVYEMAVDTTFICFLED 738          
BLAST of EY756928 vs. ExPASy Swiss-Prot
Match: CTL2_DANRE (Choline transporter-like protein 2 OS=Danio rerio GN=slc44a2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.662e-13
Identity = 43/127 (33.86%), Postives = 67/127 (52.76%), Query Frame = 1
Query:  175 SVSMPHNPLVKSLRYAVTTSLGSICYGSLFTAAIRTLRWEIRGIRSKIGNNE-----CLLCCVDFLFHLVETLVRFFNKYAYVQIAVYGKGFNRSARDAWELFQSTGVEALVAYDCSGAVLLMGTIV 540
            S  MP  PL  SL  ++    GS+ +GSL  A ++ +R  +  I  K+   E      LLCC+   F  +E  ++F N+ AY+ +A+YGK F RSARDA+ L     V  +V    +  +L +G ++
Sbjct:  476 SKDMPAFPLCASLGRSLRYHTGSLAFGSLLLAIVQVIRVLLEYIDHKLKGAENKFAKFLLCCLKCCFWCLEKFIKFINRNAYIMVAIYGKNFCRSARDAFFLLMRNVVRVVVLDKVTDFILFLGKLL 602          
BLAST of EY756928 vs. ExPASy Swiss-Prot
Match: PNS1_ASPFU (Protein pns1 OS=Aspergillus fumigatus GN=pns1 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.912e-12
Identity = 46/155 (29.68%), Postives = 74/155 (47.74%), Query Frame = 1
Query:   88 FWTGAVLCNTVHVIVSGMVFLVLIHDGRDSVSMPHNPLVKSLRYAVTTSLGSICYGSLFTAAIRTLRWEIRGIRSKIGNNECLLCCVDF-----LFHLVETLVRFFNKYAYVQIAVYGKGFNRSARDAWELFQSTGVEALVAYDCSGAVLLMGTI 537
            +W    L NT+H  ++G V+       +    MP      + R A T S GS+ +GSL  A I  LR      +        ++  + F        +++ LV  FN+YA+  IA+YGK +  +A+D W + +  G++ALV     G VL MG++
Sbjct:  290 YWFSEWLKNTIHTTIAG-VYGSWYFWSQSPNGMPRGSTRGAFRRATTYSFGSVSFGSLIIAIINMLRQACSVAQRNEAAEGSIVGSIMFWILGCFIAILDWLVTLFNRYAFCHIALYGKAYIPAAKDTWTMMRDRGIDALVNDCLIGPVLTMGSV 443          
BLAST of EY756928 vs. ExPASy Swiss-Prot
Match: CTLHA_DICDI (CTL-like protein DDB_G0288717 OS=Dictyostelium discoideum GN=DDB_G0288717 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.887e-11
Identity = 47/212 (22.17%), Postives = 91/212 (42.92%), Query Frame = 1
Query:   88 FWTGAVLCNTVHVIVSGMVF-LVLIHDGRDSVSMPHNPLVKSLRYAVTTSLGSICYGSLFTAAIRTLRWEIRGIRSKIGNNE---CLLCCVDFLFHLVETLVRFFNKYAYVQIAVYGKGFNRSARDAWELFQSTGVEALVAYDCSGAVLLMGTIVGGLITGTCAXAWTYTKWHDRVVMVGSTXXXXXXXXXXXXXXXIESAVTSIYICYAED 711
            FW  + +       V+G+V       D      +      +SL  A++TS GS+ +GSL  A I  + + +R  ++    N+    ++ C+  +   +E++VR+ NK+ Y+ +A++G  F  S ++ ++L       A++     G VLL+G I+G   +     A  Y        +  +                +     +I++CY ED
Sbjct:  300 FWASSFISAVFQHCVAGVVSNWYFSRDPTGKSLVGQENAYRSLGRALSTSFGSLAFGSLLIAFIEFMAFMLRVCKNSNATNKLVVMVVSCLQCILGCIESIVRWINKFGYIYVAMHGHSFCTSTKECFDLISRNMFNAVIMDFIGGLVLLLGKILGSAASALFTTALLYGMGKSLNPITIALSAIFAFCIFNLFTHIVGIGTDTIFVCYLED 511          
BLAST of EY756928 vs. ExPASy Swiss-Prot
Match: CTLHC_DICDI (CTL-like protein DDB_G0269978 OS=Dictyostelium discoideum GN=DDB_G0269978 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.491e-11
Identity = 40/161 (24.84%), Postives = 75/161 (46.58%), Query Frame = 1
Query:   88 FWTGAVLCNTVHVIVSGMVFLVLIHDGRDSVSMPHNPLVKSLRYAVTTSLGSICYGSLFTAAIRTLRWEIRGIRSKIGNNECLLCCVDFLFHLVETLVRFFNKYAYVQIAVYGKGFNRSARDAWELFQSTGVEALVAYDCSGAVLL-----MGTIVGGLIT 555
            +WT  V+  T + +VSG+V         D   MP  P   SL  ++T+S GSI +GSL    ++ +++  RG     G       C+ F+  +   ++  FN Y +  +++YG+ F  S++  + L  +   +    ++     +L     M  I+G ++T
Sbjct:  274 YWTHYVITYTCYSVVSGLVASWYFFADEDFNGMPPKPCAHSLYRSMTSSFGSIAFGSLLVCLVQMVQFICRGFARVPGLTSLFCNCLQFIALIFTRMLYTFNIYTFSMVSIYGQSFCNSSKKTYNLMVNNNEKLFATHNYMLITMLSVSLSMFLIIGFIVT 434          
BLAST of EY756928 vs. ExPASy Swiss-Prot
Match: CTL2_SALSA (Choline transporter-like protein 2 OS=Salmo salar GN=slc44a2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.491e-11
Identity = 39/124 (31.45%), Postives = 66/124 (53.23%), Query Frame = 1
Query:  184 MPHNPLVKSLRYAVTTSLGSICYGSLFTAAIRTLRWEIRGIRSKIGN--NEC---LLCCVDFLFHLVETLVRFFNKYAYVQIAVYGKGFNRSARDAWELFQSTGVEALVAYDCSGAVLLMGTIV 540
            MP  P+  SL  ++    GS+ +GSL  + I+ +R  +  I  K+    N+C   LLCC+   F  +E  ++F N+ AY+ +A+YGK F  SA+DA+ L     +   V    +  +L +G ++
Sbjct:  485 MPAFPIFSSLGRSLRYHTGSLAFGSLILSIIQIIRVLLEYIDHKLQGTQNKCTKFLLCCLKCCFWCLEKFIKFINRNAYIMVAIYGKNFCTSAKDAFFLLMRNMIRVAVLDKVTDFLLFLGKLL 608          
BLAST of EY756928 vs. ExPASy Swiss-Prot
Match: CTL5_MOUSE (Choline transporter-like protein 5 OS=Mus musculus GN=Slc44a5 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.171e-11
Identity = 43/133 (32.33%), Postives = 68/133 (51.13%), Query Frame = 1
Query:  184 MPHNPLVKSLRYAVTTSLGSICYGSLFTAAIRTLRWEIRGI--RSKIGNNEC---LLCCVDFLFHLVETLVRFFNKYAYVQIAVYGKGFNRSARDAWELFQSTGVEALVAYDCSGAVLLMGTIVGGLITGTCA 567
            +P  PL  +   AV    GS+ +GSL  A+++  +  +  +  R K   N     L CC+   F  +E +V+F N+ AY+ IA+YGK F  S RDA+ L     ++  V  + +  VLL+G ++   I G  A
Sbjct:  490 IPPYPLFTAFGRAVRYHTGSLAFGSLILASVQMFKVIVEYLDRRLKKAQNSAAQFLHCCLQCCFWCLEKMVKFLNRNAYIMIALYGKNFCESTRDAFYLLMRNILKVTVTDEVTYFVLLLGKVLVSGIVGVLA 622          
The following BLAST results are available for this feature:
BLAST of EY756928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
PNS1_CANGA4.063e-1430.77Protein PNS1 OS=Candida glabrata GN=PNS1 PE=3 SV=1[more]
PNS1_NEUCR1.544e-1329.48Protein PNS1 OS=Neurospora crassa GN=pns-1 PE=3 SV... [more]
CTL1L_CAEBR2.633e-1327.50Choline transporter-like protein 1 OS=Caenorhabdit... [more]
CTL1L_CAEEL4.492e-1327.00Choline transporter-like protein 1 OS=Caenorhabdit... [more]
CTL2_DANRE7.662e-1333.86Choline transporter-like protein 2 OS=Danio rerio ... [more]
PNS1_ASPFU2.912e-1229.68Protein pns1 OS=Aspergillus fumigatus GN=pns1 PE=3... [more]
CTLHA_DICDI1.887e-1122.17CTL-like protein DDB_G0288717 OS=Dictyostelium dis... [more]
CTLHC_DICDI5.491e-1124.84CTL-like protein DDB_G0269978 OS=Dictyostelium dis... [more]
CTL2_SALSA5.491e-1131.45Choline transporter-like protein 2 OS=Salmo salar ... [more]
CTL5_MOUSE7.171e-1132.33Choline transporter-like protein 5 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-015-C07-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756928 ID=EY756928; Name=EY756928; organism=Citrus sinensis; type=EST; length=876bp
CCACGCGTCCGGACAGCTGGTGCTGTTGCTTCAGACATGGATGATGGTGG
ACGCTGGTGGCTTCTTTTGGTTCTCTCTGTAAGCTTATTTTGGACTGGCG
CAGTCCTCTGTAACACGGTGCATGTGATAGTGTCTGGGATGGTGTTTCTT
GTTCTTATTCATGATGGCCGAGATTCAGTATCAATGCCTCACAACCCATT
GGTGAAGTCTCTGCGGTATGCTGTAACAACATCTTTGGGCAGCATTTGCT
ATGGATCACTCTTCACAGCTGCTATTCGGACTTTGAGGTGGGAGATCAGG
GGGATCCGTTCAAAGATTGGCAACAACGAGTGTTTGCTTTGCTGTGTTGA
TTTTCTTTTTCATCTTGTGGAAACTCTTGTTAGGTTTTTTAACAAGTATG
CGTATGTCCAGATAGCTGTCTATGGCAAAGGTTTTAACCGGTCAGCAAGG
GATGCCTGGGAGTTATTTCAATCAACTGGTGTTGAAGCACTTGTTGCCTA
TGATTGTTCAGGTGCTGTTCTACTGATGGGCACTATTGTGGGTGGGCTTA
TCACTGGAACTTGTGCANGTGCTTGGACATATACTAAATGGCACGATAGA
GTGGTTATGGTGGGTTCCACAGCAATGCTGATGGGAATGGTCTTAGTGGG
ATTGGCAATGGTTGTAATAGAAAGTGCTGTTACTTCCATATATATCTGTT
ATGCAGAAGATCCTTTGTTGATCACAAATGGGATGCTGNATCCTTTAATC
AGATGTCTGAAACACTACACCAACGTCTTTCATATAGGAGTGCACGAGCT
AGGGAAGGTTTGACCCACCAACGGTTTGATTCCCATACACAAAATTCACT
TTCTGGTTAAGTGGTGAAAATGTTTG
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