EY756898

Overview
NameEY756898
Unique NameEY756898
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756898 vs. ExPASy Swiss-Prot
Match: SNU13_CANAL (13 kDa ribonucleoprotein-associated protein OS=Candida albicans GN=SNU13 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.926e-38
Identity = 83/117 (70.94%), Postives = 91/117 (77.78%), Query Frame = 3 
Query:   12 PLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 362
            PLADS LT  ILD+VQQ+ N +QLKKGANEATKTLNRGISEFI+MAADT             EDKNVPYVFVPSK ALGRACGV+RPVIA SVTSN+AS +K QI  +KD IE LLI
Sbjct:   10 PLADSALTQQILDVVQQSQNLRQLKKGANEATKTLNRGISEFIIMAADTEPIEILLHLPLLCEDKNVPYVFVPSKAALGRACGVSRPVIAASVTSNDASSIKNQIYGIKDKIETLLI 126
[Close]
BLAST of EY756898 vs. ExPASy Swiss-Prot
Match: SNU13_USTMA (13 kDa ribonucleoprotein-associated protein OS=Ustilago maydis GN=SNU13 PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 7.739e-38
Identity = 81/117 (69.23%), Postives = 94/117 (80.34%), Query Frame = 3 
Query:   12 PLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 362
            PLAD+ LT  ILDL+QQA++YKQLKKGANEATKTLNRGI EFIVMAAD              EDKNVPYVFVPSK ALGRACGV+RPV++ SVT+NEA +L++QIQ +K AIE+LLI
Sbjct:   10 PLADATLTNQILDLIQQASHYKQLKKGANEATKTLNRGICEFIVMAADVEPIEIVLHLPLLCEDKNVPYVFVPSKTALGRACGVSRPVVSASVTTNEARELQSQIQTVKLAIERLLI 126
[Close]
BLAST of EY756898 vs. ExPASy Swiss-Prot
Match: SNU13_DEBHA (13 kDa ribonucleoprotein-associated protein OS=Debaryomyces hansenii GN=SNU13 PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 7.739e-38
Identity = 83/117 (70.94%), Postives = 91/117 (77.78%), Query Frame = 3 
Query:   12 PLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 362
            PLADS LT  ILD+VQQ+ N +QLKKGANEATKTLNRGISEFI+MAADT             EDKNVPYVFVPSK ALGRACGV+RPVIA SVT+NEAS +K QI  +KD IE LLI
Sbjct:   10 PLADSALTQQILDVVQQSQNLRQLKKGANEATKTLNRGISEFIIMAADTEPIEILLHLPLLCEDKNVPYVFVPSKTALGRACGVSRPVIAASVTTNEASAMKNQIYGIKDKIETLLI 126
[Close]
BLAST of EY756898 vs. ExPASy Swiss-Prot
Match: SNU13_YEAST (13 kDa ribonucleoprotein-associated protein OS=Saccharomyces cerevisiae GN=SNU13 PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.252e-37
Identity = 81/117 (69.23%), Postives = 92/117 (78.63%), Query Frame = 3 
Query:   12 PLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 362
            PLAD+ LT  ILD+VQQAAN +QLKKGANEATKTLNRGISEFI+MAAD              EDKNVPYVFVPS+ ALGRACGV+RPVIA S+T+N+AS +KTQI  +KD IE LLI
Sbjct:   10 PLADAALTQQILDVVQQAANLRQLKKGANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRVALGRACGVSRPVIAASITTNDASAIKTQIYAVKDKIETLLI 126
[Close]
BLAST of EY756898 vs. ExPASy Swiss-Prot
Match: SNU13_CRYNE (13 kDa ribonucleoprotein-associated protein OS=Cryptococcus neoformans GN=SNU13 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 8.557e-37
Identity = 80/117 (68.38%), Postives = 90/117 (76.92%), Query Frame = 3 
Query:   12 PLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 362
            PLA++ LT  ILDL+QQA +YKQLKKGANEATKTLNRGI EFIVM AD              EDKNVPYVF+PSK ALGRACGV+RPVIA SVT+NEA +L  QIQ +K+ IEKLLI
Sbjct:   11 PLANAQLTNQILDLIQQAQHYKQLKKGANEATKTLNRGICEFIVMTADVEPIEIVLHLPLLCEDKNVPYVFLPSKTALGRACGVSRPVIAASVTTNEARELNAQIQAVKNEIEKLLI 127
[Close]
BLAST of EY756898 vs. ExPASy Swiss-Prot
Match: SNU13_ASHGO (13 kDa ribonucleoprotein-associated protein OS=Ashbya gossypii GN=SNU13 PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.460e-36
Identity = 79/117 (67.52%), Postives = 92/117 (78.63%), Query Frame = 3 
Query:   12 PLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 362
            PLAD+ LT  ILD+VQQA+N +QLKKGANEATKTLNRGISEFI+MAAD              EDKNVPYVFVPS+ ALGRACGV+RPVIA S+T+N+AS +K+QI  +KD IE LLI
Sbjct:   11 PLADAALTQQILDVVQQASNMRQLKKGANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRVALGRACGVSRPVIAASITTNDASAIKSQIYAVKDKIETLLI 127
[Close]
BLAST of EY756898 vs. ExPASy Swiss-Prot
Match: SNU13_KLULA (13 kDa ribonucleoprotein-associated protein OS=Kluyveromyces lactis GN=SNU13 PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.906e-36
Identity = 78/117 (66.67%), Postives = 92/117 (78.63%), Query Frame = 3 
Query:   12 PLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 362
            PLAD+ L+  ILD+VQQA+N +QLKKGANEATKTLNRGISEFI+MAAD              EDKNVPYVFVPS+ ALGRACGV+RPVIA S+T+N+AS +K+QI  +KD IE LLI
Sbjct:   10 PLADATLSQQILDVVQQASNMRQLKKGANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRTALGRACGVSRPVIAASITTNDASAIKSQIYAVKDKIETLLI 126
[Close]
BLAST of EY756898 vs. ExPASy Swiss-Prot
Match: SNU13_CANGA (13 kDa ribonucleoprotein-associated protein OS=Candida glabrata GN=SNU13 PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.906e-36
Identity = 79/117 (67.52%), Postives = 90/117 (76.92%), Query Frame = 3 
Query:   12 PLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 362
            PLAD  L+  ILD+VQQAAN +QLKKGANEATKTLNRGISEFI+MAAD              EDKNVPYVFVPS+ ALGRACGV+RPVIA S+T+N+AS +K QI  +KD IE LLI
Sbjct:   10 PLADEKLSQQILDVVQQAANLRQLKKGANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRVALGRACGVSRPVIAASITTNDASAIKNQIYAVKDKIETLLI 126
[Close]
BLAST of EY756898 vs. ExPASy Swiss-Prot
Match: NH2L1_DROME (NHP2-like protein 1 homolog OS=Drosophila melanogaster GN=hoip PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.595e-35
Identity = 71/117 (60.68%), Postives = 90/117 (76.92%), Query Frame = 3 
Query:   12 PLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 362
            PLAD+ LT  I++L+QQA NY QL+KGANEATKTLNRG+++ +V+A D              EDKNVPYVFV SKQALGRACGV+RP++ACSVT+NE SQLK+QI  ++  IE+LL+
Sbjct:   11 PLADAQLTAKIMNLLQQALNYNQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIVACSVTTNEGSQLKSQITSIQQEIERLLV 127
[Close]
BLAST of EY756898 vs. ExPASy Swiss-Prot
Match: NH2L1_DICDI (NHP2-like protein 1 homolog OS=Dictyostelium discoideum GN=DDB_G0282243 PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.411e-31
Identity = 66/117 (56.41%), Postives = 86/117 (73.50%), Query Frame = 3 
Query:   12 PLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKLLI 362
            PLADS LT+TILDL+QQ+ N  QLKKGANE TK ++R  +EF+V+AAD              EDKN+PYVFV SK  LGRAC V+RPV+AC+VT ++ SQLK+QI  +KD++++L I
Sbjct:   12 PLADSKLTLTILDLIQQSNNLGQLKKGANECTKAVSRSTAEFVVLAADAEPLEILLHIPLLCEDKNIPYVFVSSKSELGRACDVSRPVVACAVTVDDKSQLKSQITNVKDSLDRLWI 128
The following BLAST results are available for this feature:
BLAST of EY756898 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
SNU13_CANAL5.926e-3870.9413 kDa ribonucleoprotein-associated protein OS=Can... [more]
SNU13_USTMA7.739e-3869.2313 kDa ribonucleoprotein-associated protein OS=Ust... [more]
SNU13_DEBHA7.739e-3870.9413 kDa ribonucleoprotein-associated protein OS=Deb... [more]
SNU13_YEAST2.252e-3769.2313 kDa ribonucleoprotein-associated protein OS=Sac... [more]
SNU13_CRYNE8.557e-3768.3813 kDa ribonucleoprotein-associated protein OS=Cry... [more]
SNU13_ASHGO1.460e-3667.5213 kDa ribonucleoprotein-associated protein OS=Ash... [more]
SNU13_KLULA1.906e-3666.6713 kDa ribonucleoprotein-associated protein OS=Klu... [more]
SNU13_CANGA1.906e-3667.5213 kDa ribonucleoprotein-associated protein OS=Can... [more]
NH2L1_DROME3.595e-3560.68NHP2-like protein 1 homolog OS=Drosophila melanoga... [more]
NH2L1_DICDI2.411e-3156.41NHP2-like protein 1 homolog OS=Dictyostelium disco... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-014-H08-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756898 ID=EY756898; Name=EY756898; organism=Citrus sinensis; type=EST; length=598bp
CCACGCGTCCGCCGCTAGCAGATTCTAATCTCACAATCACGATACTGGAT
CTCGTTCAGCAAGCTGCCAATTACAAGCAGCTCAAAAAGGGCGCCAATGA
AGCTACTAAGACTCTTAACAGAGGTATCTCCGAGTTTATTGTGATGGCTG
CTGATACCGAGCCTCTGGAGATTCTTCTTCATCTTCCACTGCTTGCAGAG
GACAAGAATGTTCCCTATGTTTTTGTCCCTTCAAAGCAGGCTCTTGGCAG
GGCATGTGGGGTCACAAGACCTGTCATTGCTTGCTCTGTGACCTCAAATG
AGGCGAGTCAGTTGAAGACTCAAATTCAACAGCTGAAGGATGCCATTGAG
AAGCTCTTGATATGAATATAATGGGATTCATATTCGGTGTGATGGGCCTC
TTTGATGGTGGTTAGAGGCTTTGACTGATGGTGTAGTTGTGCTGCTTGGA
AATCTTCTATTATTAATCTTTGTATTTTTGTCTTTTATGTTTTCTTGTCA
TGCATTATGGGAAAGCTTTTGGAATCATATTTACCAGAACCTGCAATGAA
TGAATGATGCTACAAACAATGGTTATAACTGTGTTTNNNANNAAANAA
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