EY756888

Overview
NameEY756888
Unique NameEY756888
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756888 vs. ExPASy Swiss-Prot
Match: CSLAB_ORYSJ (Probable mannan synthase 11 OS=Oryza sativa subsp. japonica GN=CSLA11 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.449e-13
Identity = 41/149 (27.52%), Postives = 74/149 (49.66%), Query Frame = 1
Query:  268 KFTLIFLVFLLTKLILPFYSFTLLCIVRAMTMVLPEAELPAWVVWYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKLNAMISGLFQLGSAYEWVATKKSGRSSEGDLVSLVETESKHNHGSSVPNLSEVQMRTKQQNMASKYKTR 714
            K  L +  F + K+     +F   C V  +++ LPE E+P W V Y+P  ++    +  P SF  ++ ++LFEN MS+ ++ A ++G+ + G   EWV T+K G +++              +GS    + +V++ T       K +TR
Sbjct:  376 KIHLWYDFFFVGKIAAHTVTFIYYCFVIPVSVWLPEIEIPLWGVVYVPTVITLCKAVGTPSSFHLVILWVLFENVMSLHRIKAAVTGILEAGRVNEWVVTEKLGDANK---------TKPDTNGSDAVKVIDVELTTPLIPKLKKRRTR 515          
BLAST of EY756888 vs. ExPASy Swiss-Prot
Match: CSLA6_ORYSJ (Probable mannan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLA6 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.178e-13
Identity = 50/182 (27.47%), Postives = 86/182 (47.25%), Query Frame = 1
Query:   37 SCAWMERTTADECALLDVLVLLAGPHIVLNDDYWR*E*P*TL*SLWETTSHM*FGYYELATPSACLDIVRANLCK-GKKFTLIFLVFLLTKLILPFYSFTLLCIVRAMTMVLPEAELPAWVVWYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKLNAMISGLFQLGSAYEWVATKKSG 579
            S  W +RTTA++  L     LL    + +     + E P TL   + +  H       L       +I+ A      KK  + +  F+  ++I  F++F    ++  M +  PE ++P W +  IP  +  L+ +  P+S   I+ + LFEN M++ +L A + G F+ G A EW+ T+K G
Sbjct:  322 SGGWEDRTTAEDMDLALRAGLLGWEFVYVGSIKVKSELPSTL-KAYRSQQHRWSCGPALLFKKMFWEILAAKKVSFWKKLYMTYDFFIARRIISTFFTFFFFSVLLPMKVFFPEVQIPLWELILIPTAIILLHSVGTPRSIHLIILWFLFENVMALHRLKATLIGFFEAGRANEWIVTQKLG 502          
The following BLAST results are available for this feature:
BLAST of EY756888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
CSLAB_ORYSJ2.449e-1327.52Probable mannan synthase 11 OS=Oryza sativa subsp.... [more]
CSLA6_ORYSJ4.178e-1327.47Probable mannan synthase 6 OS=Oryza sativa subsp. ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-014-G10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756888 ID=EY756888; Name=EY756888; organism=Citrus sinensis; type=EST; length=835bp
GTACTGCTGCCGGGTGGAGAATAAGGGTTCGGAGGATCTTGTGCTTGGAT
GGAGAGGACTACCGCTGATGAATGTGCATTGCTCGACGTGCTCGTCCTCT
TAGCTGGACCCCATATTGTCCTCAATGACGACTACTGGCGGTGAGAGTAG
CCATAGACCTTATGAAGCTTATGGGAAACAACATCACACATGTGATTCGG
GTACTATGAACTAGCAACCCCTAGTGCGTGCCTAGACATCGTAAGAGCCA
ACTTATGCAAGGGGAAGAAATTTACTTTGATCTTTCTTGTCTTTCTGCTC
ACAAAACTTATCCTACCATTTTATTCTTTCACCCTCTTATGTATAGTGCG
TGCCATGACAATGGTTCTCCCAGAGGCTGAGCTCCCTGCTTGGGTCGTCT
GGTACATACCGGCCACCATGTCATTTCTCAACATTCTCCCTGCTCCAAAA
TCCTTCCCATTTATTGTCCCTTACCTTCTTTTTGAAAACACAATGTCAGT
GACCAAGCTCAATGCCATGATATCTGGCCTCTTCCAGCTCGGAAGTGCGT
ATGAGTGGGTCGCTACCAAGAAATCCGGCCGCTCCTCTGAGGGTGATCTT
GTTTCATTGGTTGAGACAGAGTCAAAACATAACCATGGGTCCTCTGTACC
CAACCTCAGTGAAGTGCAGATGCGAACTAAACAACAGAATATGGCTTCCA
AGTATAAGACGAGGGAGCCTCATAGGATATACATGTAAGAATTGACACTG
GCCTTCCTTCTATTACAGCTTCAACTAGGAGCCTCCTGTCTGCTCAAGGA
CCCTTTTTACTTCTACTCTTCCATGGACATCAACC
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