EY756885
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756885 vs. ExPASy Swiss-Prot
Match: CM2A2_DICDI (Charged multivesicular body protein 2a homolog 2 OS=Dictyostelium discoideum GN=chmp2a2 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.018e-22 Identity = 60/180 (33.33%), Postives = 94/180 (52.22%), Query Frame = 3 Query: 57 IFSKKPNPKEALRESKREMQHATRGMEKEIGALRQEEKKLGAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHXXXXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAP 596 +F K+ PKE LRE++R + + R +++E AL+ +EKK+ +IK+ AK G + KI+A+ L+R R I + Q++ ++ Q + + QM + K+M EF++QS +MDM EMM+DT+ QVLDEIG+D+ASQL AP Sbjct: 3 LFGKQKTPKEVLRENQRNLNKSMREIDRERVALQNQEKKIILDIKKMAKQGQMNSAKIMAKDLVRTRYHIQKFYEMKTQLQAVSLRIQTLQSTQAMAEAMKGVTKAMITMNRQMNLPQFTKIMMEFEQQSDKMDMKEEMMNDTMDQVMEQDGEEEQSQEILNQVLDEIGIDLASQLVDAP 182
BLAST of EY756885 vs. ExPASy Swiss-Prot
Match: CHM2B_MOUSE (Charged multivesicular body protein 2b OS=Mus musculus GN=Chmp2b PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.330e-22 Identity = 60/206 (29.13%), Postives = 112/206 (54.37%), Query Frame = 3 Query: 66 KKPNPKEALRESKREMQHATRGMEKEIGALRQEEKKLGAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHXXXXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKG--KIASKNTEDASSSGIDQLEKRLAAL 677 KK + ++E RE++ R + ++ AL ++EK+L EIK+ AK GN+ A ++LA+QL+ LR+Q +++ ++T T+ M++ +M+P K + M+ FQK++ +M+MT EM++DT+ QVLDEIG++++ +++ AP + S +T A+ S +++E++L AL Sbjct: 6 KKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACRVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLPSASTSKATISD-EEIERQLKAL 210
BLAST of EY756885 vs. ExPASy Swiss-Prot
Match: CHM2B_BOVIN (Charged multivesicular body protein 2b OS=Bos taurus GN=CHMP2B PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.962e-22 Identity = 60/208 (28.85%), Postives = 113/208 (54.33%), Query Frame = 3 Query: 66 KKPNPKEALRESKREMQHATRGMEKEIGALRQEEKKLGAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHXXXXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSS----GIDQLEKRLAAL 677 KK + ++E RE++ R + ++ AL ++EK+L EIK+ AK GN+ A ++LA+QL+ LR+Q +++ ++T T+ M++ +M+P K + M+ FQK++ +M+MT EM++DT+ QVLDEIG++++ +++ AP A+++ AS+S +++E++L AL Sbjct: 6 KKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACRVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPS---AARSLPSASTSKSTISDEEIERQLKAL 210
BLAST of EY756885 vs. ExPASy Swiss-Prot
Match: CHM2A_XENTR (Charged multivesicular body protein 2a OS=Xenopus tropicalis GN=chmp2a PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.275e-21 Identity = 68/215 (31.63%), Postives = 107/215 (49.77%), Query Frame = 3 Query: 57 IFSKKPNPKEALRESKREMQHATRGMEKEIGALRQEEKKLGAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHXXXXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPK--GKI----ASKNTEDASSSGID-QLEKRLAALR 680 +F ++ P+E LR+++R + A R M++E L Q+EKK+ A+IK+ AK G A KI+A+ L+R R+ + RA I+ ++ Q + ++ Q++ + K+M EF+KQS MDM EMM+D I QVLDE+G+ + +LS P G + A K A+ + D LE+RL LR Sbjct: 4 LFGRRKTPEEMLRQNQRALNKAMREMDRERQKLEQQEKKIIADIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFIMMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMATMNRQLKLPQIQKIMMEFEKQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAVVSQVLDELGLTLTDELSNLPSTGGSLSVAGAKKGEPSAALADADADLEERLNNLR 218
BLAST of EY756885 vs. ExPASy Swiss-Prot
Match: CHM2A_XENLA (Charged multivesicular body protein 2a OS=Xenopus laevis GN=chmp2a PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.297e-21 Identity = 65/215 (30.23%), Postives = 107/215 (49.77%), Query Frame = 3 Query: 57 IFSKKPNPKEALRESKREMQHATRGMEKEIGALRQEEKKLGAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHXXXXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKG----KIASKNTEDASSSGID---QLEKRLAALR 680 +F ++ P+E LR+++R + A R +++E L Q+EKK+ A+IK+ AK G A KI+A+ L+R R+ + RA I+ ++ Q + ++ Q++ + K+M EF+KQS MDM EMM+D I QVLDE+G+ + +LS P +A +A+++ D LE+RL LR Sbjct: 4 LFGRRKTPEELLRQNQRALNRAMRELDRERQKLEQQEKKIIADIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFIMMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMATMNRQLKLPQIQKIMMEFEKQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAVVSQVLDELGLTLTDELSNLPSTGGSLSVAGAKKGEATAALADADADLEERLNNLR 218
BLAST of EY756885 vs. ExPASy Swiss-Prot
Match: CHM2A_DANRE (Charged multivesicular body protein 2a OS=Danio rerio GN=chmp2a PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.621e-20 Identity = 55/181 (30.39%), Postives = 94/181 (51.93%), Query Frame = 3 Query: 54 NIFSKKPNPKEALRESKREMQHATRGMEKEIGALRQEEKKLGAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHXXXXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAP 596 ++F ++ P+E LR+++R + A R +++E L Q+EKK+ A+IK+ AK G A KI+A+ L+R R+ + RA I+ ++ Q + ++ Q++ + K+M EF++QS MDM EMM+D I QVLDE+G+ ++ +LS P Sbjct: 3 SLFGRRKTPEEMLRQNQRALNRAMRDLDRERQRLEQQEKKIIADIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFIMMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMATMNRQLKLPQIQKIMMEFERQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAVVSQVLDELGLTLSDELSNLP 183
BLAST of EY756885 vs. ExPASy Swiss-Prot
Match: CHM2A_HUMAN (Charged multivesicular body protein 2a OS=Homo sapiens GN=CHMP2A PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.067e-20 Identity = 64/217 (29.49%), Postives = 108/217 (49.77%), Query Frame = 3 Query: 57 IFSKKPNPKEALRESKREMQHATRGMEKEIGALRQEEKKLGAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHXXXXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPK--GKIA----SKNTEDASSSGID---QLEKRLAALR 680 +F ++ P+E LR+++R + A R +++E L +EKK+ A+IK+ AK G A +I+A+ L+R R+ + RA I+ ++ Q + ++ Q++ + K+M EF++Q+ MDM EMM+D I QVLDE+G+ + +LS P G ++ K E A+S+ D LE+RL LR Sbjct: 4 LFGRRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQVLDELGLSLTDELSNLPSTGGSLSVAAGGKKAEAAASALADADADLEERLKNLR 220
BLAST of EY756885 vs. ExPASy Swiss-Prot
Match: CHM2A_MOUSE (Charged multivesicular body protein 2a OS=Mus musculus GN=Chmp2a PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.347e-19 Identity = 61/217 (28.11%), Postives = 104/217 (47.93%), Query Frame = 3 Query: 57 IFSKKPNPKEALRESKREMQHATRGMEKEIGALRQEEKKLGAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHXXXXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPK---------GKIASKNTEDASSSGIDQLEKRLAALR 680 +F ++ P+E LR+++R + A R +++E L +EKK+ A+IK+ AK G A +I+A+ L+R R+ + RA I+ ++ Q + ++ Q++ + K+M EF++Q+ MDM EMM+D I QVLDE+G+ + +LS P G ++ T A + LE+RL LR Sbjct: 4 LFGRRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQVLDELGLSLTDELSNLPSTGGSLSVAAGGKKAEATASALADADADLEERLKNLR 220
BLAST of EY756885 vs. ExPASy Swiss-Prot
Match: CHM2A_CHICK (Charged multivesicular body protein 2a OS=Gallus gallus GN=CHMP2A PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.830e-19 Identity = 59/215 (27.44%), Postives = 105/215 (48.84%), Query Frame = 3 Query: 57 IFSKKPNPKEALRESKREMQHATRGMEKEIGALRQEEKKLGAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHXXXXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPK--GKIASKNTEDASSSGI-----DQLEKRLAALR 680 +F ++ P+E LR+++R + A R +++E L +EKK+ +IK+ AK G A KI+A+ L+R R+ + RA ++ ++ Q + ++ Q++ + K+M EF+KQ+ MDM E+M+D I QVLDE+G+++ +L+ P G +A+ A ++ LE+RL LR Sbjct: 4 LFGRRKTPEELLRQNQRALTRAMRELDRERQKLEAQEKKIIIDIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFITMRANVQAVSLKIQTLKSNNSMALAMKGVTKAMATMNRQLKLPQIQKIMMEFEKQAGIMDMKEELMNDAIDDAMGDEDDEEESDAVVSQVLDELGLNLTDELATLPPPGGSLAAGEGRAAEAAAALADADADLEERLKNLR 218
BLAST of EY756885 vs. ExPASy Swiss-Prot
Match: DID4_YEAST (DOA4-independent degradation protein 4 OS=Saccharomyces cerevisiae GN=DID4 PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 8.349e-17 Identity = 53/187 (28.34%), Postives = 89/187 (47.59%), Query Frame = 3 Query: 57 IFSKKPNPKEALRESKREMQHATRGMEKEIGALRQEEKKLGAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHXXXXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTI-XXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIAS 614 +F K P+E L++++R ++ R +E+E L ++KKL +EIK++AK G A K+ A+ L+R R I +AQ++ I+ QA+ + M + ++ EF+KQS M E M + I +VLDEIGVD+ SQL + P+ +++ Sbjct: 7 VFGKNVTPQERLKKNQRALERTQRELEREKRKLELQDKKLVSEIKKSAKNGQVAAAKVQAKDLVRTRNYIQKFDNMKAQLQAISLRIQAVRSSDQMTRSMSEATGLLAGMNRTMNLPQLQRISMEFEKQSDLMGQRQEFMDEAIDNVMGDEVDEDEEADEIVNKVLDEIGVDLNSQLQSTPQNLVSN 193 The following BLAST results are available for this feature:
BLAST of EY756885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756885 ID=EY756885; Name=EY756885; organism=Citrus sinensis; type=EST; length=855bpback to top |