EY756885

Overview
NameEY756885
Unique NameEY756885
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756885 vs. ExPASy Swiss-Prot
Match: CM2A2_DICDI (Charged multivesicular body protein 2a homolog 2 OS=Dictyostelium discoideum GN=chmp2a2 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.018e-22
Identity = 60/180 (33.33%), Postives = 94/180 (52.22%), Query Frame = 3
Query:   57 IFSKKPNPKEALRESKREMQHATRGMEKEIGALRQEEKKLGAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHXXXXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAP 596
            +F K+  PKE LRE++R +  + R +++E  AL+ +EKK+  +IK+ AK G   + KI+A+ L+R R  I      + Q++ ++   Q + +                    QM   +  K+M EF++QS +MDM  EMM+DT+                  QVLDEIG+D+ASQL  AP
Sbjct:    3 LFGKQKTPKEVLRENQRNLNKSMREIDRERVALQNQEKKIILDIKKMAKQGQMNSAKIMAKDLVRTRYHIQKFYEMKTQLQAVSLRIQTLQSTQAMAEAMKGVTKAMITMNRQMNLPQFTKIMMEFEQQSDKMDMKEEMMNDTMDQVMEQDGEEEQSQEILNQVLDEIGIDLASQLVDAP 182          
BLAST of EY756885 vs. ExPASy Swiss-Prot
Match: CHM2B_MOUSE (Charged multivesicular body protein 2b OS=Mus musculus GN=Chmp2b PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.330e-22
Identity = 60/206 (29.13%), Postives = 112/206 (54.37%), Query Frame = 3
Query:   66 KKPNPKEALRESKREMQHATRGMEKEIGALRQEEKKLGAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHXXXXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKG--KIASKNTEDASSSGIDQLEKRLAAL 677
            KK    + ++E  RE++   R + ++  AL ++EK+L  EIK+ AK GN+ A ++LA+QL+ LR+Q        +++  ++T T+ M++                    +M+P K  + M+ FQK++ +M+MT EM++DT+                  QVLDEIG++++ +++ AP     + S +T  A+ S  +++E++L AL
Sbjct:    6 KKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACRVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLPSASTSKATISD-EEIERQLKAL 210          
BLAST of EY756885 vs. ExPASy Swiss-Prot
Match: CHM2B_BOVIN (Charged multivesicular body protein 2b OS=Bos taurus GN=CHMP2B PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.962e-22
Identity = 60/208 (28.85%), Postives = 113/208 (54.33%), Query Frame = 3
Query:   66 KKPNPKEALRESKREMQHATRGMEKEIGALRQEEKKLGAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHXXXXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIASKNTEDASSS----GIDQLEKRLAAL 677
            KK    + ++E  RE++   R + ++  AL ++EK+L  EIK+ AK GN+ A ++LA+QL+ LR+Q        +++  ++T T+ M++                    +M+P K  + M+ FQK++ +M+MT EM++DT+                  QVLDEIG++++ +++ AP    A+++   AS+S      +++E++L AL
Sbjct:    6 KKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACRVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPS---AARSLPSASTSKSTISDEEIERQLKAL 210          
BLAST of EY756885 vs. ExPASy Swiss-Prot
Match: CHM2A_XENTR (Charged multivesicular body protein 2a OS=Xenopus tropicalis GN=chmp2a PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.275e-21
Identity = 68/215 (31.63%), Postives = 107/215 (49.77%), Query Frame = 3
Query:   57 IFSKKPNPKEALRESKREMQHATRGMEKEIGALRQEEKKLGAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHXXXXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPK--GKI----ASKNTEDASSSGID-QLEKRLAALR 680
            +F ++  P+E LR+++R +  A R M++E   L Q+EKK+ A+IK+ AK G   A KI+A+ L+R R+ +      RA I+ ++   Q + ++                   Q++  +  K+M EF+KQS  MDM  EMM+D I                  QVLDE+G+ +  +LS  P   G +    A K    A+ +  D  LE+RL  LR
Sbjct:    4 LFGRRKTPEEMLRQNQRALNKAMREMDRERQKLEQQEKKIIADIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFIMMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMATMNRQLKLPQIQKIMMEFEKQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAVVSQVLDELGLTLTDELSNLPSTGGSLSVAGAKKGEPSAALADADADLEERLNNLR 218          
BLAST of EY756885 vs. ExPASy Swiss-Prot
Match: CHM2A_XENLA (Charged multivesicular body protein 2a OS=Xenopus laevis GN=chmp2a PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.297e-21
Identity = 65/215 (30.23%), Postives = 107/215 (49.77%), Query Frame = 3
Query:   57 IFSKKPNPKEALRESKREMQHATRGMEKEIGALRQEEKKLGAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHXXXXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKG----KIASKNTEDASSSGID---QLEKRLAALR 680
            +F ++  P+E LR+++R +  A R +++E   L Q+EKK+ A+IK+ AK G   A KI+A+ L+R R+ +      RA I+ ++   Q + ++                   Q++  +  K+M EF+KQS  MDM  EMM+D I                  QVLDE+G+ +  +LS  P       +A     +A+++  D    LE+RL  LR
Sbjct:    4 LFGRRKTPEELLRQNQRALNRAMRELDRERQKLEQQEKKIIADIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFIMMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMATMNRQLKLPQIQKIMMEFEKQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAVVSQVLDELGLTLTDELSNLPSTGGSLSVAGAKKGEATAALADADADLEERLNNLR 218          
BLAST of EY756885 vs. ExPASy Swiss-Prot
Match: CHM2A_DANRE (Charged multivesicular body protein 2a OS=Danio rerio GN=chmp2a PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.621e-20
Identity = 55/181 (30.39%), Postives = 94/181 (51.93%), Query Frame = 3
Query:   54 NIFSKKPNPKEALRESKREMQHATRGMEKEIGALRQEEKKLGAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHXXXXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAP 596
            ++F ++  P+E LR+++R +  A R +++E   L Q+EKK+ A+IK+ AK G   A KI+A+ L+R R+ +      RA I+ ++   Q + ++                   Q++  +  K+M EF++QS  MDM  EMM+D I                  QVLDE+G+ ++ +LS  P
Sbjct:    3 SLFGRRKTPEEMLRQNQRALNRAMRDLDRERQRLEQQEKKIIADIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFIMMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMATMNRQLKLPQIQKIMMEFERQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAVVSQVLDELGLTLSDELSNLP 183          
BLAST of EY756885 vs. ExPASy Swiss-Prot
Match: CHM2A_HUMAN (Charged multivesicular body protein 2a OS=Homo sapiens GN=CHMP2A PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.067e-20
Identity = 64/217 (29.49%), Postives = 108/217 (49.77%), Query Frame = 3
Query:   57 IFSKKPNPKEALRESKREMQHATRGMEKEIGALRQEEKKLGAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHXXXXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPK--GKIA----SKNTEDASSSGID---QLEKRLAALR 680
            +F ++  P+E LR+++R +  A R +++E   L  +EKK+ A+IK+ AK G   A +I+A+ L+R R+ +      RA I+ ++   Q + ++                   Q++  +  K+M EF++Q+  MDM  EMM+D I                  QVLDE+G+ +  +LS  P   G ++     K  E A+S+  D    LE+RL  LR
Sbjct:    4 LFGRRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQVLDELGLSLTDELSNLPSTGGSLSVAAGGKKAEAAASALADADADLEERLKNLR 220          
BLAST of EY756885 vs. ExPASy Swiss-Prot
Match: CHM2A_MOUSE (Charged multivesicular body protein 2a OS=Mus musculus GN=Chmp2a PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.347e-19
Identity = 61/217 (28.11%), Postives = 104/217 (47.93%), Query Frame = 3
Query:   57 IFSKKPNPKEALRESKREMQHATRGMEKEIGALRQEEKKLGAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHXXXXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPK---------GKIASKNTEDASSSGIDQLEKRLAALR 680
            +F ++  P+E LR+++R +  A R +++E   L  +EKK+ A+IK+ AK G   A +I+A+ L+R R+ +      RA I+ ++   Q + ++                   Q++  +  K+M EF++Q+  MDM  EMM+D I                  QVLDE+G+ +  +LS  P          G   ++ T  A +     LE+RL  LR
Sbjct:    4 LFGRRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQVLDELGLSLTDELSNLPSTGGSLSVAAGGKKAEATASALADADADLEERLKNLR 220          
BLAST of EY756885 vs. ExPASy Swiss-Prot
Match: CHM2A_CHICK (Charged multivesicular body protein 2a OS=Gallus gallus GN=CHMP2A PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.830e-19
Identity = 59/215 (27.44%), Postives = 105/215 (48.84%), Query Frame = 3
Query:   57 IFSKKPNPKEALRESKREMQHATRGMEKEIGALRQEEKKLGAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHXXXXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTIXXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPK--GKIASKNTEDASSSGI-----DQLEKRLAALR 680
            +F ++  P+E LR+++R +  A R +++E   L  +EKK+  +IK+ AK G   A KI+A+ L+R R+ +      RA ++ ++   Q + ++                   Q++  +  K+M EF+KQ+  MDM  E+M+D I                  QVLDE+G+++  +L+  P   G +A+     A ++         LE+RL  LR
Sbjct:    4 LFGRRKTPEELLRQNQRALTRAMRELDRERQKLEAQEKKIIIDIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFITMRANVQAVSLKIQTLKSNNSMALAMKGVTKAMATMNRQLKLPQIQKIMMEFEKQAGIMDMKEELMNDAIDDAMGDEDDEEESDAVVSQVLDELGLNLTDELATLPPPGGSLAAGEGRAAEAAAALADADADLEERLKNLR 218          
BLAST of EY756885 vs. ExPASy Swiss-Prot
Match: DID4_YEAST (DOA4-independent degradation protein 4 OS=Saccharomyces cerevisiae GN=DID4 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 8.349e-17
Identity = 53/187 (28.34%), Postives = 89/187 (47.59%), Query Frame = 3
Query:   57 IFSKKPNPKEALRESKREMQHATRGMEKEIGALRQEEKKLGAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQIRGIATHTQAMHAHXXXXXXXXXXXXXXXXXXXQMEPAKQAKVMREFQKQSAQMDMTTEMMSDTI-XXXXXXXXXXXXXXXXXXQVLDEIGVDVASQLSAAPKGKIAS 614
            +F K   P+E L++++R ++   R +E+E   L  ++KKL +EIK++AK G   A K+ A+ L+R R  I      +AQ++ I+   QA+ +                     M   +  ++  EF+KQS  M    E M + I                   +VLDEIGVD+ SQL + P+  +++
Sbjct:    7 VFGKNVTPQERLKKNQRALERTQRELEREKRKLELQDKKLVSEIKKSAKNGQVAAAKVQAKDLVRTRNYIQKFDNMKAQLQAISLRIQAVRSSDQMTRSMSEATGLLAGMNRTMNLPQLQRISMEFEKQSDLMGQRQEFMDEAIDNVMGDEVDEDEEADEIVNKVLDEIGVDLNSQLQSTPQNLVSN 193          
The following BLAST results are available for this feature:
BLAST of EY756885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
CM2A2_DICDI1.018e-2233.33Charged multivesicular body protein 2a homolog 2 O... [more]
CHM2B_MOUSE1.330e-2229.13Charged multivesicular body protein 2b OS=Mus musc... [more]
CHM2B_BOVIN2.962e-2228.85Charged multivesicular body protein 2b OS=Bos taur... [more]
CHM2A_XENTR3.275e-2131.63Charged multivesicular body protein 2a OS=Xenopus ... [more]
CHM2A_XENLA7.297e-2130.23Charged multivesicular body protein 2a OS=Xenopus ... [more]
CHM2A_DANRE3.621e-2030.39Charged multivesicular body protein 2a OS=Danio re... [more]
CHM2A_HUMAN8.067e-2029.49Charged multivesicular body protein 2a OS=Homo sap... [more]
CHM2A_MOUSE2.347e-1928.11Charged multivesicular body protein 2a OS=Mus musc... [more]
CHM2A_CHICK6.830e-1927.44Charged multivesicular body protein 2a OS=Gallus g... [more]
DID4_YEAST8.349e-1728.34DOA4-independent degradation protein 4 OS=Saccharo... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-014-G07-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756885 ID=EY756885; Name=EY756885; organism=Citrus sinensis; type=EST; length=855bp
CCACGCGTCCGAATTATTCTAACTCACAACAACATCGAAACAAAAAAGAA
GTGAACATCTTTTCCAAAAAGCCAAACCCTAAAGAGGCTCTTCGAGAGAG
CAAGAGAGAAATGCAGCACGCTACTAGAGGCATGGAGAAGGAAATTGGAG
CACTACGACAAGAAGAAAAGAAGCTTGGTGCTGAGATAAAAAGAACCGCT
AAAACAGGAAATGAGGGTGCTACTAAAATTCTGGCCCGGCAGCTGATCAG
ACTGAGGCAGCAAATAGCTAACTTACAGGGGAGTCGAGCTCAAATAAGAG
GCATAGCTACTCACACACAGGCTATGCATGCACATTCTTCAGGTGCTGTT
GGCATGAAAGGAGCCAGTAAGGCAATGGCAGCCATGAATAAGCAAATGGA
ACCTGCGAAGCAAGCCAAGGTTATGCGGGAATTCCAGAAGCAATCAGCAC
AGATGGATATGACTACTGAAATGATGTCCGATACCATTGATGATGCCTTG
GACAATGATGAGGCTGAAGAGGAAACTGAAGAGCTGACAAATCAAGTGCT
AGATGAAATTGGTGTTGATGTTGCCTCACAGCTGTCAGCAGCTCCAAAAG
GTAAAATCGCCAGTAAAAACACGGAAGATGCCAGCAGTTCGGGCATTGAC
CAGCTTGAGAAGCGGTTGGCGGCTCTCAGAAATCCATGAGTTTTTGCAGT
TTCCTCTTCAAAACACCTTTGTTTTTATATAAATTTTTTTGTACAATAAA
TCTTTTAGNTGGAATCGAGGTGATCCTCCCTACTACAGTTCGCACCCCTG
TAAGATGCCACTGTCGATATAATCCCATTGATTGATTAAAAAAGAAAAAA
TGGGC
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