EY756882
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756882 vs. ExPASy Swiss-Prot
Match: RS12_ORENI (40S ribosomal protein S12 OS=Oreochromis niloticus GN=rps12 PE=2 SV=3) HSP 1 Score: 137.502 bits (345), Expect = 6.148e-32 Identity = 65/122 (53.28%), Postives = 84/122 (68.85%), Query Frame = 1 Query: 64 GEAMDLMTALQVVLTKSLAHGGLARGLHEGAKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSANTLGEWAGLCKIDSYGNATKVEGCSCVVVNDFGEESDGLNVVHQHIKS 429 G MD+ TAL VL +L H GLA G+ E AK ++K A LCVLA +C++P YVKLV+ALCA+H ++L+ V LGEW GLCKID G KV GCSCVVV D+G+ES +V+ ++ KS Sbjct: 9 GGVMDVNTALPEVLKTALIHDGLAPGIREAAKALDKRQAHLCVLAANCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFKS 130
BLAST of EY756882 vs. ExPASy Swiss-Prot
Match: RS12_MOUSE (40S ribosomal protein S12 OS=Mus musculus GN=Rps12 PE=1 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 6.148e-32 Identity = 65/121 (53.72%), Postives = 84/121 (69.42%), Query Frame = 1 Query: 64 GEAMDLMTALQVVLTKSLAHGGLARGLHEGAKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSANTLGEWAGLCKIDSYGNATKVEGCSCVVVNDFGEESDGLNVVHQHIK 426 G MD+ TALQ VL +L H GLARG+ E AK ++K A LCVLA +C++P YVKLV+AL A+H ++L+ V LGEW GLCKID G KV GCSCVVV D+G+ES +V+ ++ K Sbjct: 9 GGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEALLAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129
BLAST of EY756882 vs. ExPASy Swiss-Prot
Match: RS12_DROME (40S ribosomal protein S12 OS=Drosophila melanogaster GN=RpS12 PE=2 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 1.978e-30 Identity = 64/124 (51.61%), Postives = 83/124 (66.94%), Query Frame = 1 Query: 61 LGEAMDLMTALQVVLTKSLAHGGLARGLHEGAKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSANTLGEWAGLCKIDSYGNATKVEGCSCVVVNDFGEESDGLNVVHQHIKSH 432 L AMD+ TALQ VL KSL GL G+H+ K ++K A LC+LAE ++P+Y KLV ALC +H + L+ V S LGEW+GLCKID G KV GCS VV+ DFGEE+ L+VV H++ + Sbjct: 15 LDGAMDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCILAESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIKDFGEETPALDVVKDHLRQN 138
BLAST of EY756882 vs. ExPASy Swiss-Prot
Match: RS12_DICDI (40S ribosomal protein S12 OS=Dictyostelium discoideum GN=rps12 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.034e-28 Identity = 59/116 (50.86%), Postives = 81/116 (69.83%), Query Frame = 1 Query: 76 DLMTALQVVLTKSLAHGGLARGLHEGAKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSANTLGEWAGLCKIDSYGNATKVEGCSCVVVNDFGEESDGLNVVHQHI 423 D M ALQ V+ +SLA G+ARGLHE K ++K A+LCVLA +C++P++V+LVKAL +HN+ L+ VP LGEWAGLCK+D A KV CS +V+ FG+ESD + ++I Sbjct: 18 DPMVALQKVIKESLAVQGVARGLHETVKALDKRTARLCVLASNCDEPNFVRLVKALATEHNIPLIEVPDNKALGEWAGLCKLDKDLAARKVVACSTLVIKTFGKESDDYKFLMEYI 133
BLAST of EY756882 vs. ExPASy Swiss-Prot
Match: RS12A_SCHPO (40S ribosomal protein S12-A OS=Schizosaccharomyces pombe GN=rps12a PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.567e-27 Identity = 58/112 (51.79%), Postives = 75/112 (66.96%), Query Frame = 1 Query: 67 EAMDLMTALQVVLTKSLAHGGLARGLHEGAKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSANTLGEWAGLCKIDSYGNATKVEGCSCVVVNDFGEESDGL 402 E + + AL+ VL ++L H GLARG+ E +K +++ A LCVL E C+Q YVKLV+ALCA+ L+ V LGEWAGLC +D GNA KV GCSCV V D+GE+S L Sbjct: 25 ETVSVEDALKEVLKRALVHDGLARGIREASKALDRRQAHLCVLCESCDQEAYVKLVEALCAESETPLIKVADPKVLGEWAGLCVLDRDGNARKVVGCSCVAVTDYGEDSAAL 136
BLAST of EY756882 vs. ExPASy Swiss-Prot
Match: RS12B_SCHPO (40S ribosomal protein S12-B OS=Schizosaccharomyces pombe GN=rps12b PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.732e-26 Identity = 56/108 (51.85%), Postives = 73/108 (67.59%), Query Frame = 1 Query: 88 ALQVVLTKSLAHGGLARGLHEGAKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSANTLGEWAGLCKIDSYGNATKVEGCSCVVVNDFGEESDGLNVV 411 +L+ VL ++L H GLARG+ E +K +++ A LCVL E C+Q YVKLV+ALCA+ L+ V LGEWAGLC +D GNA KV GCSCV V D+GE+S L + Sbjct: 35 SLKEVLKRALVHDGLARGIREASKALDRRQAHLCVLCESCDQEAYVKLVEALCAESQTPLVKVADPKILGEWAGLCVLDRDGNARKVVGCSCVAVTDYGEDSVALQTL 142
BLAST of EY756882 vs. ExPASy Swiss-Prot
Match: RS12_ERYGR (40S ribosomal protein S12 OS=Erysiphe graminis subsp. hordei GN=RPS12 PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.598e-26 Identity = 54/107 (50.47%), Postives = 72/107 (67.29%), Query Frame = 1 Query: 73 MDLMTALQVVLTKSLAHGGLARGLHEGAKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSANTLGEWAGLCKIDSYGNATKVEGCSCVVVNDFGEES 393 M ++ AL+ L +L H GLARGL E +K +++ A +CVL E C + Y KL+ ALC++H + L+ VP LGEWAGLC +D GNA KV CSCVVV ++GEES Sbjct: 12 MTVLDALKGALRTALMHDGLARGLREASKALDRREAHMCVLNEACEEEAYKKLIVALCSEHKIPLIKVPDGKQLGEWAGLCVLDREGNARKVVNCSCVVVKNWGEES 118
BLAST of EY756882 vs. ExPASy Swiss-Prot
Match: RS12_CAEEL (40S ribosomal protein S12 OS=Caenorhabditis elegans GN=rps-12 PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 2.766e-24 Identity = 54/119 (45.38%), Postives = 73/119 (61.34%), Query Frame = 1 Query: 73 MDLMTALQVVLTKSLAHGGLARGLHEGAKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPSANTLGEWAGLCKIDSYGNATKVEGCSCVVVNDFGEESDGLNVVHQHIKS 429 MD AL+ VL + GLA+GLHE K ++K A CVLAE+C++P YVKLV+ LCA+H + L+ V +GE+ GLCK D G A KV GCS VV ++G E G ++ + S Sbjct: 20 MDKEGALRAVLRAAHHADGLAKGLHETCKALDKREAHFCVLAENCDEPQYVKLVETLCAEHQIPLIKVADKKIIGEYCGLCKYDKEGKARKVVGCSSAVVTNWGNEEQGRAILTDYFAS 138
BLAST of EY756882 vs. ExPASy Swiss-Prot
Match: RS12_YEAST (40S ribosomal protein S12 OS=Saccharomyces cerevisiae GN=RPS12 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.679e-19 Identity = 53/113 (46.90%), Postives = 70/113 (61.95%), Query Frame = 1 Query: 88 ALQVVLTKSLAHGGLARGLHEGAKVIEKHAAQLCVLAEDCNQPDYVKLVKALCAD--HNVSLLTVPSANTLGEWAGLCKIDSYGNATKVEGCSCVVVNDFGEESDGLNVVHQH 420 AL+VVL +L H GLARGL E K + + A L VL + + +KLV+ L D + V L+ V A LGEWAGL KID GNA KV G S VVV ++G E+D L+++ +H Sbjct: 27 ALKVVLRTALVHDGLARGLRESTKALTRGEALLVVLVSSVTEANIIKLVEGLANDPENKVPLIKVADAKQLGEWAGLGKIDREGNARKVVGASVVVVKNWGAETDELSMIMEH 139
BLAST of EY756882 vs. ExPASy Swiss-Prot
Match: RS12_PLAF7 (40S ribosomal protein S12 OS=Plasmodium falciparum (isolate 3D7) GN=RPS12 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.570e-19 Identity = 48/107 (44.86%), Postives = 68/107 (63.55%), Query Frame = 1 Query: 76 DLMTALQVVLTKSLAHGGLARGLHEGAKVIEKHAAQLCVLAEDCNQPDYVKLVKALCADHNVSLLTVPS-ANTLGEWAGLCKIDSYGNATKVEGCSCVVVNDFGEES 393 D +TA+Q V+ + H GL G+ E K IE A++C L++ C++P Y KL+ LCA+ N+ L V + + LG WAGL K+D+ GNA K+ G S V V DFGE+S Sbjct: 20 DNVTAIQKVIKNAHVHDGLKIGIREVIKSIESQEAKVCFLSDVCSEPAYKKLITTLCAEKNIPLFMVQNDSKDLGHWAGLFKLDNEGNARKIIGASSVAVVDFGEDS 126 The following BLAST results are available for this feature:
BLAST of EY756882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756882 ID=EY756882; Name=EY756882; organism=Citrus sinensis; type=EST; length=674bpback to top |