EY756881

Overview
NameEY756881
Unique NameEY756881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9656 contig Csv1_Contig9656:215..1067. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2)

HSP 1 Score: 252.677 bits (644), Expect = 1.960e-66
Identity = 119/182 (65.38%), Postives = 154/182 (84.62%), Query Frame = 3
Query:  114 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLTAGEGQGNG 659
            DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR+L +  K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD++R  +F+++ RWL+ELR H D NIV++L+GNKSDL    AV T++ K FA++E L+F+ETSALE+TNVENAF  V+T+I+ IV+K+++ AG+  G+G
Sbjct:   12 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDDAGSG 193          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 4.366e-66
Identity = 121/183 (66.12%), Postives = 154/183 (84.15%), Query Frame = 3
Query:  114 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLTAGEGQGNGN 662
            DY+FKVVLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TRTL +  K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD++RR +F+++ RWL+EL++H D NIV++L+GNKSDL    AVPTED K +A++E L F+ETSALEATNVE+AF  V+T+I+ I +KK + AGE  GN +
Sbjct:   11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGE-DGNAS 192          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RB11A_CHICK (Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 9.726e-66
Identity = 116/181 (64.09%), Postives = 156/181 (86.19%), Query Frame = 3
Query:   93 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLT 635
            G+ + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ +  K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++  +++++ RWL+ELR HAD NIVI+L+GNKSDL   RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T++TEI+ IV++K ++
Sbjct:    2 GNRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS 182          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RAA1C_ARATH (Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.270e-65
Identity = 120/185 (64.86%), Postives = 152/185 (82.16%), Query Frame = 3
Query:  102 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLTAGEGQGN 656
            + + DY+FKVVLIGDS VGKS +L+RF +NEFSL+SK+TIGVEF TR+L +  K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD++R  +F+++  WL+ELR+H D NIV++L+GNKSDL    AV TEDAK FA+KE L+F+ETSALEATNVENAF  V+T+I +IV+KK + A     N
Sbjct:    7 DDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASESAN 191          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RB11A_RAT (Ras-related protein Rab-11A OS=Rattus norvegicus GN=Rab11a PE=1 SV=3)

HSP 1 Score: 249.595 bits (636), Expect = 1.659e-65
Identity = 116/181 (64.09%), Postives = 155/181 (85.64%), Query Frame = 3
Query:   93 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLT 635
            G  + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ +  K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++  +++++ RWL+ELR HAD NIVI+L+GNKSDL   RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T++TEI+ IV++K ++
Sbjct:    2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS 182          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RB11A_RABIT (Ras-related protein Rab-11A OS=Oryctolagus cuniculus GN=RAB11A PE=2 SV=3)

HSP 1 Score: 249.595 bits (636), Expect = 1.659e-65
Identity = 116/181 (64.09%), Postives = 155/181 (85.64%), Query Frame = 3
Query:   93 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLT 635
            G  + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ +  K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++  +++++ RWL+ELR HAD NIVI+L+GNKSDL   RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T++TEI+ IV++K ++
Sbjct:    2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS 182          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RB11A_PONAB (Ras-related protein Rab-11A OS=Pongo abelii GN=RAB11A PE=2 SV=3)

HSP 1 Score: 249.595 bits (636), Expect = 1.659e-65
Identity = 116/181 (64.09%), Postives = 155/181 (85.64%), Query Frame = 3
Query:   93 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLT 635
            G  + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ +  K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++  +++++ RWL+ELR HAD NIVI+L+GNKSDL   RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T++TEI+ IV++K ++
Sbjct:    2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS 182          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RB11A_PIG (Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11A PE=2 SV=3)

HSP 1 Score: 249.595 bits (636), Expect = 1.659e-65
Identity = 116/181 (64.09%), Postives = 155/181 (85.64%), Query Frame = 3
Query:   93 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLT 635
            G  + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ +  K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++  +++++ RWL+ELR HAD NIVI+L+GNKSDL   RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T++TEI+ IV++K ++
Sbjct:    2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS 182          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RB11A_MOUSE (Ras-related protein Rab-11A OS=Mus musculus GN=Rab11a PE=1 SV=3)

HSP 1 Score: 249.595 bits (636), Expect = 1.659e-65
Identity = 116/181 (64.09%), Postives = 155/181 (85.64%), Query Frame = 3
Query:   93 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLT 635
            G  + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ +  K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++  +++++ RWL+ELR HAD NIVI+L+GNKSDL   RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T++TEI+ IV++K ++
Sbjct:    2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS 182          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RB11A_HUMAN (Ras-related protein Rab-11A OS=Homo sapiens GN=RAB11A PE=1 SV=3)

HSP 1 Score: 249.595 bits (636), Expect = 1.659e-65
Identity = 116/181 (64.09%), Postives = 155/181 (85.64%), Query Frame = 3
Query:   93 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLT 635
            G  + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ +  K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++  +++++ RWL+ELR HAD NIVI+L+GNKSDL   RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T++TEI+ IV++K ++
Sbjct:    2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS 182          
The following BLAST results are available for this feature:
BLAST of EY756881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RIC2_ORYSJ1.960e-6665.38Ras-related protein RIC2 OS=Oryza sativa subsp. ja... [more]
RAA1B_ARATH4.366e-6666.12Ras-related protein RABA1b OS=Arabidopsis thaliana... [more]
RB11A_CHICK9.726e-6664.09Ras-related protein Rab-11A OS=Gallus gallus GN=RA... [more]
RAA1C_ARATH1.270e-6564.86Ras-related protein RABA1c OS=Arabidopsis thaliana... [more]
RB11A_RAT1.659e-6564.09Ras-related protein Rab-11A OS=Rattus norvegicus G... [more]
RB11A_RABIT1.659e-6564.09Ras-related protein Rab-11A OS=Oryctolagus cunicul... [more]
RB11A_PONAB1.659e-6564.09Ras-related protein Rab-11A OS=Pongo abelii GN=RAB... [more]
RB11A_PIG1.659e-6564.09Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11... [more]
RB11A_MOUSE1.659e-6564.09Ras-related protein Rab-11A OS=Mus musculus GN=Rab... [more]
RB11A_HUMAN1.659e-6564.09Ras-related protein Rab-11A OS=Homo sapiens GN=RAB... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-014-G03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756881 ID=EY756881; Name=EY756881; organism=Citrus sinensis; type=EST; length=854bp
CCACGCGTCCGTGTGATTTGTGAAGTTGGTCGGTCTTGGTAAGCTCGATC
TCTTACTAACTCTCAGTAGAAATGGCCAGCGGAGGAGGCTATGGAGATCC
CAATCAGAAAATTGATTACGTATTCAAAGTTGTTTTAATCGGAGACTCGG
CCGTCGGCAAGTCTCAGATACTGGCAAGGTTTGCTCGAAACGAGTTCAGT
TTGGACTCTAAAGCCACCATTGGAGTTGAGTTTCAAACTAGGACTTTAGT
TATTCAACATAAGAGCGTCAAGGCACAGATCTGGGACACTGCTGGCCAAG
AACGATACAGGGCTGTCACAAGTGCATATTACAGAGGTGCTGTTGGGGCA
ATGCTGGTTTACGACATTAGCAGACGCCAGAGCTTTGATCACATAACCCG
TTGGCTGGAAGAGTTGCGAAGCCATGCTGACAAGAATATTGTTATCATTC
TCATTGGCAACAAAAGTGACCTTGAGGAGCAGCGGGCGGTTCCTACAGAA
GATGCCAAAGAATTTGCTCAGAAGGAAGGACTATTCTTCTTGGAGACCTC
AGCACTGGAAGCAACTAATGTGGAAAATGCTTTCATGACTGTNGTGACTG
AGATTTTCAACATTGTAAACAAGAAGAATCTAACTGCTGGTGAAGGTCAA
GGCAATGGCAACCCTGCATCCCTTTNCTGGGCAGAAGATTCTTGTTCCAG
GCCCAGCTCAAGAAATCCCTGNCAAGAGCAGCATGTGCTGTAGAACATGA
TGCAATTTGATATTACTCTCATATTGCACGAATCGGTTTATGGTANTAAT
AACATTTTTTTGAAAAGGGNTGTGCGCTTGGGGTGTATATTTTCCCATTG
GCTA
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