EY756881

Overview
NameEY756881
Unique NameEY756881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9656 contig Csv1_Contig9656:215..1067. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RB11A_CANFA (Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3)

HSP 1 Score: 249.595 bits (636), Expect = 1.659e-65
Identity = 116/181 (64.09%), Postives = 155/181 (85.64%), Query Frame = 3
Query:   93 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLT 635
            G  + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ +  K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++  +++++ RWL+ELR HAD NIVI+L+GNKSDL   RAVPT++A+ FA+K GL F+ETSAL++TNVE AF T++TEI+ IV++K ++
Sbjct:    2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS 182          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RB11A_BOVIN (Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3)

HSP 1 Score: 248.44 bits (633), Expect = 3.696e-65
Identity = 116/181 (64.09%), Postives = 154/181 (85.08%), Query Frame = 3
Query:   93 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLT 635
            G  + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ +  K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++  +++++ RWL+ELR HAD NIVI+L+GNKSDL   RAVPT++A+ FA+K GL F+ETSAL+ TNVE AF T++TEI+ IV++K ++
Sbjct:    2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQKQMS 182          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RB11A_TOBAC (Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 4.827e-65
Identity = 121/181 (66.85%), Postives = 150/181 (82.87%), Query Frame = 3
Query:  102 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLTAGE 644
            + + DY+FK+VLIGDS VGKS IL+RF RNEF L+SK+TIGVEF TRTL ++ K+VKAQIWDTAGQERYRA+TSAYYRGAVGA+L YDI++RQ+FD++ RWL ELR H D NIVIIL GNKSDL+  RAV  +D +   +KEGL FLETSALEA NV+ AF T++T+I++I++KK L A E
Sbjct:    6 DHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIILAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKKALAAQE 186          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 8.233e-65
Identity = 123/197 (62.44%), Postives = 159/197 (80.71%), Query Frame = 3
Query:   84 GGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLTAGEGQGNGNPASL 674
            GGY   +   DY+FK+VLIGDS VGKS +L+RF+RNEF+L+SK+TIGVEF TR++ +  K VKAQIWDTAGQERYRA+TSAYYRGAVGA++VYDI+R  +F+++ RWL+ELR H D+NIVI+L+GNK+DL   RAV TEDAK FA++E  FF+ETSALE+ NVENAF  V+TEI+ +V +K L  G+     +PA+L
Sbjct:    3 GGYRAEDD-YDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVGD-----DPAAL 193          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: YPTC6_CHLRE (Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6 PE=3 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.404e-64
Identity = 118/184 (64.13%), Postives = 154/184 (83.70%), Query Frame = 3
Query:   99 PNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLTAGEGQ 650
            P+   DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ +  K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++  +F+++ RWL+ELR HAD NIVI+L+GNKSDL+  R V TE A+ F ++EGL F+ETSALE+TNVE AF  ++TEI++IV+KK L + + +
Sbjct:    5 PDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVLDSEDNR 188          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.404e-64
Identity = 116/181 (64.09%), Postives = 154/181 (85.08%), Query Frame = 3
Query:  102 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLTAGE 644
            + + DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF T++L I +K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD++R  +++++TRWL+ELR H D NIV++LIGNKSDL    AV T++AK  A++EGL+F+ETSALEATNVENAF   +T+I+ IV+KK + AG+
Sbjct:    7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSKKAVEAGD 187          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.834e-64
Identity = 116/177 (65.54%), Postives = 150/177 (84.75%), Query Frame = 3
Query:  114 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLTAGE 644
            DY+FK VLIGDS VGKS +L RF RNEF+++SK+TIGVEF TR +V+ +K +KAQIWDTAGQERYRA+TSAYYRGAVGA++VYDI+++ SFD++ RWL+ELR HAD NIVI+L+GNK+DL   RAV TE+A+ FA +  L F+ETSA++A+NVE AF TV+TEIF IV+ ++L AG+
Sbjct:    8 DYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGD 184          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RB11B_RAT (Ras-related protein Rab-11B OS=Rattus norvegicus GN=Rab11b PE=2 SV=4)

HSP 1 Score: 246.128 bits (627), Expect = 1.834e-64
Identity = 117/192 (60.94%), Postives = 156/192 (81.25%), Query Frame = 3
Query:   93 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLT--AGEGQGNGN 662
            G  + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ +  K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++  +++++ RWL+ELR HAD NIVI+L+GNKSDL   RAVPT++A+ FA+K  L F+ETSAL++TNVE AF  ++TEI+ IV++K +   A   +  GN
Sbjct:    2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGN 193          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RB11B_MOUSE (Ras-related protein Rab-11B OS=Mus musculus GN=Rab11b PE=1 SV=3)

HSP 1 Score: 246.128 bits (627), Expect = 1.834e-64
Identity = 117/192 (60.94%), Postives = 156/192 (81.25%), Query Frame = 3
Query:   93 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLT--AGEGQGNGN 662
            G  + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ +  K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++  +++++ RWL+ELR HAD NIVI+L+GNKSDL   RAVPT++A+ FA+K  L F+ETSAL++TNVE AF  ++TEI+ IV++K +   A   +  GN
Sbjct:    2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGN 193          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RB11B_HUMAN (Ras-related protein Rab-11B OS=Homo sapiens GN=RAB11B PE=1 SV=4)

HSP 1 Score: 246.128 bits (627), Expect = 1.834e-64
Identity = 117/192 (60.94%), Postives = 156/192 (81.25%), Query Frame = 3
Query:   93 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLT--AGEGQGNGN 662
            G  + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ +  K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++  +++++ RWL+ELR HAD NIVI+L+GNKSDL   RAVPT++A+ FA+K  L F+ETSAL++TNVE AF  ++TEI+ IV++K +   A   +  GN
Sbjct:    2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGN 193          
The following BLAST results are available for this feature:
BLAST of EY756881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RB11A_CANFA1.659e-6564.09Ras-related protein Rab-11A OS=Canis familiaris GN... [more]
RB11A_BOVIN3.696e-6564.09Ras-related protein Rab-11A OS=Bos taurus GN=RAB11... [more]
RB11A_TOBAC4.827e-6566.85Ras-related protein Rab11A OS=Nicotiana tabacum GN... [more]
RB11B_TOBAC8.233e-6562.44Ras-related protein Rab11B OS=Nicotiana tabacum GN... [more]
YPTC6_CHLRE1.404e-6464.13Ras-related protein YPTC6 OS=Chlamydomonas reinhar... [more]
YPT3_NICPL1.404e-6464.09Ras-related protein YPT3 OS=Nicotiana plumbaginifo... [more]
YPT3_SCHPO1.834e-6465.54GTP-binding protein ypt3 OS=Schizosaccharomyces po... [more]
RB11B_RAT1.834e-6460.94Ras-related protein Rab-11B OS=Rattus norvegicus G... [more]
RB11B_MOUSE1.834e-6460.94Ras-related protein Rab-11B OS=Mus musculus GN=Rab... [more]
RB11B_HUMAN1.834e-6460.94Ras-related protein Rab-11B OS=Homo sapiens GN=RAB... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-014-G03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756881 ID=EY756881; Name=EY756881; organism=Citrus sinensis; type=EST; length=854bp
CCACGCGTCCGTGTGATTTGTGAAGTTGGTCGGTCTTGGTAAGCTCGATC
TCTTACTAACTCTCAGTAGAAATGGCCAGCGGAGGAGGCTATGGAGATCC
CAATCAGAAAATTGATTACGTATTCAAAGTTGTTTTAATCGGAGACTCGG
CCGTCGGCAAGTCTCAGATACTGGCAAGGTTTGCTCGAAACGAGTTCAGT
TTGGACTCTAAAGCCACCATTGGAGTTGAGTTTCAAACTAGGACTTTAGT
TATTCAACATAAGAGCGTCAAGGCACAGATCTGGGACACTGCTGGCCAAG
AACGATACAGGGCTGTCACAAGTGCATATTACAGAGGTGCTGTTGGGGCA
ATGCTGGTTTACGACATTAGCAGACGCCAGAGCTTTGATCACATAACCCG
TTGGCTGGAAGAGTTGCGAAGCCATGCTGACAAGAATATTGTTATCATTC
TCATTGGCAACAAAAGTGACCTTGAGGAGCAGCGGGCGGTTCCTACAGAA
GATGCCAAAGAATTTGCTCAGAAGGAAGGACTATTCTTCTTGGAGACCTC
AGCACTGGAAGCAACTAATGTGGAAAATGCTTTCATGACTGTNGTGACTG
AGATTTTCAACATTGTAAACAAGAAGAATCTAACTGCTGGTGAAGGTCAA
GGCAATGGCAACCCTGCATCCCTTTNCTGGGCAGAAGATTCTTGTTCCAG
GCCCAGCTCAAGAAATCCCTGNCAAGAGCAGCATGTGCTGTAGAACATGA
TGCAATTTGATATTACTCTCATATTGCACGAATCGGTTTATGGTANTAAT
AACATTTTTTTGAAAAGGGNTGTGCGCTTGGGGTGTATATTTTCCCATTG
GCTA
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