EY756881

Overview
NameEY756881
Unique NameEY756881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9656 contig Csv1_Contig9656:215..1067. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RB11B_BOVIN (Ras-related protein Rab-11B OS=Bos taurus GN=RAB11B PE=2 SV=3)

HSP 1 Score: 246.128 bits (627), Expect = 1.834e-64
Identity = 117/192 (60.94%), Postives = 156/192 (81.25%), Query Frame = 3
Query:   93 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLT--AGEGQGNGN 662
            G  + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ +  K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++  +++++ RWL+ELR HAD NIVI+L+GNKSDL   RAVPT++A+ FA+K  L F+ETSAL++TNVE AF  ++TEI+ IV++K +   A   +  GN
Sbjct:    2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGN 193          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RB11B_DISOM (Ras-related protein Rab-11B OS=Discopyge ommata PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.395e-64
Identity = 114/181 (62.98%), Postives = 153/181 (84.53%), Query Frame = 3
Query:   93 GDPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLT 635
            G  + + DY+FKVVLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF TR++ +  K++KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDI++  +++++ RWL+ELR HAD NIVI+L+GNKSDL   RAVPT++A+ FA+K  L F+ETSAL++TNVE AF  ++TEI+ IV++K ++
Sbjct:    2 GTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIS 182          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 9.103e-64
Identity = 118/181 (65.19%), Postives = 149/181 (82.32%), Query Frame = 3
Query:  102 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLTAGE 644
            + + DY+FK+VLIGDS VGKS +L+RF RNEF+L+SK+TIGVEF T++L I  K +KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD++R  +F+   RWL+ELR H D NIV++LIGNKSDL     V TED K FA+KE L+F+ETSALEATNVENAF  V+T+I+ IV+K+ + AG+
Sbjct:    7 DDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEAGD 187          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 1.006e-62
Identity = 113/180 (62.78%), Postives = 149/180 (82.78%), Query Frame = 3
Query:  102 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLTAG 641
            +++ DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF T+T  ++ K VKAQIWDTAGQERYRA+TSAYYRGAVGA+L+YD++R  +F++  RWL ELR H D NIV++LIGNK DL    AV TE+AK FA++E L+F+ETSAL+ATNVENAF  V+T+I  IV+K+++  G
Sbjct:    7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGG 186          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: ARA1_ARATH (Ras-related protein ARA-1 OS=Arabidopsis thaliana GN=ARA-1 PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 7.213e-61
Identity = 117/207 (56.52%), Postives = 161/207 (77.78%), Query Frame = 3
Query:   96 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLTAG--EGQGNGNPASLXWAEDSCSRPSS 710
            D   + +Y+FK+V+IGDSAVGKS +L+R+ARNEFS +SKATIGVEFQT+++ I+ K VKAQIWDTAGQER+RAVTSAYYRGAVGA++VYDI+RR +F+ + RWL+EL+ H+D  +  +L+GNK DLE  RAV  E+ K  A++EGLFF+ETSAL++TNV+ AF  V+ +I+N V++K L +   + +   N  SL   ++S S+ SS
Sbjct:    4 DDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKDELTVNRVSLVKDDNSASKQSS 210          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: YPT31_YEAST (GTP-binding protein YPT31/YPT8 OS=Saccharomyces cerevisiae GN=YPT31 PE=1 SV=3)

HSP 1 Score: 229.18 bits (583), Expect = 2.320e-59
Identity = 110/183 (60.11%), Postives = 140/183 (76.50%), Query Frame = 3
Query:  114 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLTAGEGQGNGN 662
            D +FK+VLIGDS VGKS +L+RF +NEF++DSK+TIGVEF TRTL I  K +KAQIWDTAGQERYRA+TSAYYRGAVGA++VYDIS+  S+++   WL ELR +AD N+ + LIGNKSDL   RAVPTE++K FAQ+  L F ETSAL + NV+ AF  ++  I+  V+K  +  G+   NGN
Sbjct:   11 DLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDSSANGN 193          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: ARA4_ARATH (Ras-related protein ARA-4 OS=Arabidopsis thaliana GN=ARA-4 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.958e-59
Identity = 108/181 (59.67%), Postives = 147/181 (81.22%), Query Frame = 3
Query:   96 DPNQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLTA 638
            D  +  +Y+FK+V+IGDSAVGKS +L R+ARNEF+ +SKATIGVEFQT++++I  K VKAQIWDTAGQER+RAVTSAYYRGAVGA++VYDI+R  +F+++ RWL+EL +H+D  +  +LIGNK DLE  RAV  E+ K  A+ EGLFF+ETSAL++TNV+ AF  V+ EI++ +++K L +
Sbjct:    4 DDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLNS 184          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RB11A_DICDI (Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 8.817e-59
Identity = 104/179 (58.10%), Postives = 150/179 (83.80%), Query Frame = 3
Query:  105 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKNLTAG 641
            ++ DY++K+VLIGDS VGKS +L+RF RNEFSL++K+TIGVEF TRT+  + K++KAQ+WDTAGQERYRA+TSAYYRGAVGA+LVYDI+++ ++  + RW+ ELR +AD+NI I+L+GNKSDL   R V T++AKEF++K  L F+ETSAL+++NVE AF  ++T+I++I+++ + + G
Sbjct:    8 EEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHIMSRPSHSTG 186          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RAB25_HUMAN (Ras-related protein Rab-25 OS=Homo sapiens GN=RAB25 PE=1 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 2.172e-57
Identity = 111/192 (57.81%), Postives = 146/192 (76.04%), Query Frame = 3
Query:  114 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKN--------LTAGEGQGNGNP 665
            ++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++   +VKAQIWDTAG ERYRA+TSAYYRGAVGA+LV+D+++ Q++  + RWL+EL  HA+  IV++L+GNKSDL + R VPTE+A+ FA+  GL FLETSAL++TNVE AF TV+ EIF  V+K+         +T G  Q    P
Sbjct:   10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNSIRTNAITLGSAQAGQEP 201          
BLAST of EY756881 vs. ExPASy Swiss-Prot
Match: RAB25_MOUSE (Ras-related protein Rab-25 OS=Mus musculus GN=Rab25 PE=1 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 2.836e-57
Identity = 111/196 (56.63%), Postives = 148/196 (75.51%), Query Frame = 3
Query:  102 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHITRWLEELRSHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAQKEGLFFLETSALEATNVENAFMTVVTEIFNIVNKKN--------LTAGEGQGNGNP 665
            ++  ++VFKVVLIG+S VGK+ +L+RF RNEFS DS+ TIGVEF TRT+++   +VKAQIWDTAG ERYRA+TSAYYRGAVGA+LV+D+++ Q++  + RWL+EL  HA+  IV++L+GNKSDL + R VPTE+A  FA+  GL FLETSAL++TNVE AF TV+ EIF  V+K+         +T G  Q   +P
Sbjct:    6 DEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQKQNSTRTSAITLGNAQAGQDP 201          
The following BLAST results are available for this feature:
BLAST of EY756881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RB11B_BOVIN1.834e-6460.94Ras-related protein Rab-11B OS=Bos taurus GN=RAB11... [more]
RB11B_DISOM2.395e-6462.98Ras-related protein Rab-11B OS=Discopyge ommata PE... [more]
RB11E_LOTJA9.103e-6465.19Ras-related protein Rab11E OS=Lotus japonicus GN=R... [more]
RAA1A_ARATH1.006e-6262.78Ras-related protein RABA1a OS=Arabidopsis thaliana... [more]
ARA1_ARATH7.213e-6156.52Ras-related protein ARA-1 OS=Arabidopsis thaliana ... [more]
YPT31_YEAST2.320e-5960.11GTP-binding protein YPT31/YPT8 OS=Saccharomyces ce... [more]
ARA4_ARATH3.958e-5959.67Ras-related protein ARA-4 OS=Arabidopsis thaliana ... [more]
RB11A_DICDI8.817e-5958.10Ras-related protein Rab-11A OS=Dictyostelium disco... [more]
RAB25_HUMAN2.172e-5757.81Ras-related protein Rab-25 OS=Homo sapiens GN=RAB2... [more]
RAB25_MOUSE2.836e-5756.63Ras-related protein Rab-25 OS=Mus musculus GN=Rab2... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-014-G03-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756881 ID=EY756881; Name=EY756881; organism=Citrus sinensis; type=EST; length=854bp
CCACGCGTCCGTGTGATTTGTGAAGTTGGTCGGTCTTGGTAAGCTCGATC
TCTTACTAACTCTCAGTAGAAATGGCCAGCGGAGGAGGCTATGGAGATCC
CAATCAGAAAATTGATTACGTATTCAAAGTTGTTTTAATCGGAGACTCGG
CCGTCGGCAAGTCTCAGATACTGGCAAGGTTTGCTCGAAACGAGTTCAGT
TTGGACTCTAAAGCCACCATTGGAGTTGAGTTTCAAACTAGGACTTTAGT
TATTCAACATAAGAGCGTCAAGGCACAGATCTGGGACACTGCTGGCCAAG
AACGATACAGGGCTGTCACAAGTGCATATTACAGAGGTGCTGTTGGGGCA
ATGCTGGTTTACGACATTAGCAGACGCCAGAGCTTTGATCACATAACCCG
TTGGCTGGAAGAGTTGCGAAGCCATGCTGACAAGAATATTGTTATCATTC
TCATTGGCAACAAAAGTGACCTTGAGGAGCAGCGGGCGGTTCCTACAGAA
GATGCCAAAGAATTTGCTCAGAAGGAAGGACTATTCTTCTTGGAGACCTC
AGCACTGGAAGCAACTAATGTGGAAAATGCTTTCATGACTGTNGTGACTG
AGATTTTCAACATTGTAAACAAGAAGAATCTAACTGCTGGTGAAGGTCAA
GGCAATGGCAACCCTGCATCCCTTTNCTGGGCAGAAGATTCTTGTTCCAG
GCCCAGCTCAAGAAATCCCTGNCAAGAGCAGCATGTGCTGTAGAACATGA
TGCAATTTGATATTACTCTCATATTGCACGAATCGGTTTATGGTANTAAT
AACATTTTTTTGAAAAGGGNTGTGCGCTTGGGGTGTATATTTTCCCATTG
GCTA
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