EY756879

Overview
NameEY756879
Unique NameEY756879
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length671
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756879 vs. ExPASy Swiss-Prot
Match: MMSB_MYCTU (Probable 3-hydroxyisobutyrate dehydrogenase OS=Mycobacterium tuberculosis GN=mmsB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.195e-11
Identity = 36/93 (38.71%), Postives = 53/93 (56.99%), Query Frame = 3 
Query:   12 GISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCV 290
            G+SA +L  ++  ++  CW+  +  PVPG +   PA+ ++  GF++ LM KDL LA+ +    G   PL S A DIYAK   + H   DFS V
Sbjct:  193 GLSAQSLFDVITGATGNCWAVHTNCPVPGPVPTSPANNDFKPGFSTALMNKDLGLAMDAVAATGATAPLGSHAADIYAKFAAD-HADLDFSAV 284
[Close]
BLAST of EY756879 vs. ExPASy Swiss-Prot
Match: MMSB_MYCBO (Probable 3-hydroxyisobutyrate dehydrogenase OS=Mycobacterium bovis GN=mmsB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.195e-11
Identity = 36/93 (38.71%), Postives = 53/93 (56.99%), Query Frame = 3 
Query:   12 GISASTLTKILNSSSARCWSSDSYNPVPGVMEGVPASRNYGGGFASKLMAKDLNLALASAKEVGVDCPLTSQAQDIYAKLCENGHDSKDFSCV 290
            G+SA +L  ++  ++  CW+  +  PVPG +   PA+ ++  GF++ LM KDL LA+ +    G   PL S A DIYAK   + H   DFS V
Sbjct:  193 GLSAQSLFDVITGATGNCWAVHTNCPVPGPVPTSPANNDFKPGFSTALMNKDLGLAMDAVAATGATAPLGSHAADIYAKFAAD-HADLDFSAV 284
The following BLAST results are available for this feature:
BLAST of EY756879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
MMSB_MYCTU1.195e-1138.71Probable 3-hydroxyisobutyrate dehydrogenase OS=Myc... [more]
MMSB_MYCBO1.195e-1138.71Probable 3-hydroxyisobutyrate dehydrogenase OS=Myc... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-014-G01-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756879 ID=EY756879; Name=EY756879; organism=Citrus sinensis; type=EST; length=671bp
CCACGCGTCCGGGAATATCTGCTAGTACTCTAACAAAGATATTGAACTCT
TCAAGTGCTCGCTGTTGGAGTAGTGACAGTTATAATCCTGTTCCTGGGGT
GATGGAAGGGGTGCCGGCTTCAAGGAATTATGGTGGTGGGTTTGCATCTA
AGCTCATGGCCAAAGACTTGAACCTTGCTTTGGCATCAGCAAAAGAGGTT
GGCGTCGATTGCCCGTTAACATCACAAGCACAAGACATATACGCGAAGCT
CTGTGAGAATGGACATGATTCCAAGGACTTCTCCTGCGTTTTCCAGCATT
ATTATGGAGGCAAGGATGAAGTTTAGCTTCAACATTCAAGGACACTGCTT
TTACAAATCCATTCTGATTCTCTTGTAAAATCAAAGCGCATTCAATCAAA
ATTAGCTCCCTAAGGCTCGTCCCTTTTCACAGAATAAATTGCAGCTAATA
AAATCTTTTTCAGTTATATGAATATTTACCCATGAAGAGATAGAGATAGA
GAATCATGTAATATGCATGTTGGAAAGCCATTAAGCCAATGTGCTTTTCT
TGTCCATTGCCGTGGGAAATCTTTCTTTTTCCCTTTCTCTTTTTCTTTTT
TAATAATCTCAAACCAAAAAAAAAAAAGATAGAANGGAAAANNNNNNNAN
NNNAAAAAAAAAAAAAAAAAA
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