EY756867

Overview
NameEY756867
Unique NameEY756867
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756867 vs. ExPASy Swiss-Prot
Match: RTNLJ_ARATH (Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.634e-28
Identity = 60/163 (36.81%), Postives = 95/163 (58.28%), Query Frame = 3
Query:  270 EKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFGLLHTVPVIYEKYEGQID 758
            E+ +H  +  G  AD+ +W+N++    +LG  T +W LFE   Y     V +  +LS+ +LFLW+ ++   N+  P++P + + E+FV   A A+R  IN  LAV REI  GR+ K+   V   LW +S VGN+ NF+T+ Y+   L   +P +YE+Y+  ID
Sbjct:    2 EESVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLID 164          
BLAST of EY756867 vs. ExPASy Swiss-Prot
Match: RTNLN_ARATH (Reticulon-like protein B14 OS=Arabidopsis thaliana GN=RTNLB14 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.804e-27
Identity = 69/199 (34.67%), Postives = 113/199 (56.78%), Query Frame = 3
Query:  267 REKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWS--NASTFINKSPPEIPVVTLPE---KFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFGLLHTVPVIYEKYEGQIDSFGEKGHDEXQKHMQSLMKGFEEGLSRIPR 848
            R + ++H LG G+ ADI  W+NKK S  +LG  T +W LFE++EY  IT +C I +L + +  +WS   +S  I   PP I  + + E   +F+         +IN  +  L +I+SG+D +     +  LW+LS+VGN+ + +TL YIVF  L T+P++YE+YE ++     K   + +K    L K   + +++IP+
Sbjct:   18 RRRSLYHNLGGGRFADIMFWKNKKESGTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLIWSYIGSSQLIQSKPPSINDLRISESNWRFLFN-------KINWFIIKLYDISSGKDFRLLFLAVVSLWILSVVGNYFSSLTLLYIVFVGLETIPMLYEQYEEELTYAASKSGRDMKK---LLNKFNSKVINKIPK 206          
BLAST of EY756867 vs. ExPASy Swiss-Prot
Match: RTNLK_ARATH (Reticulon-like protein B11 OS=Arabidopsis thaliana GN=RTNLB11 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.605e-26
Identity = 60/160 (37.50%), Postives = 95/160 (59.38%), Query Frame = 3
Query:  279 IHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFGLLHTVPVIYEKYEGQID 758
            +H  LGAG  AD+ LWRN+  +  +L  +T  W LFE   Y+L++ V ++ +L +A+ FLW+ ++T +N+  P +P + +PE+F  + A  LR  IN  L++  +I   R+  + L V   LW +S VG   N +TL YI   L  + P++YEKY+  ID
Sbjct:   13 VHQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHID 172          
BLAST of EY756867 vs. ExPASy Swiss-Prot
Match: RTNLP_ARATH (Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.688e-25
Identity = 54/172 (31.40%), Postives = 97/172 (56.40%), Query Frame = 3
Query:  243 SKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFGLLHTVPVIYEKYEGQID 758
            S  +RL GR+  +H  +G GK AD+ LWR + +S GV+  +T  W++FE      +++   + ++ + + F+ +  S F N+    +P + L E+ V   A++ R ++N  L +  ++  G D + F  V+  LWLLS +G++ +  TL YI   L  T+P +Y KY+ ++D
Sbjct:   20 SSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVD 191          
BLAST of EY756867 vs. ExPASy Swiss-Prot
Match: RTNLO_ARATH (Reticulon-like protein B15 OS=Arabidopsis thaliana GN=RTNLB15 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.136e-20
Identity = 62/191 (32.46%), Postives = 103/191 (53.93%), Query Frame = 3
Query:  279 IHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSN-ASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFGLLHTVPVIYEKYEGQIDSFGEKGHDEXQKHMQSLMKGFEEGLSRIPR 848
            +  +LG G  AD+ LW++K  S   L  AT  W L E +E  L+ L+C I +L + +LFLW+     F  + PP    +  P+  +     AL   +   L +L EIA G+D K FL  I  + ++  +G++ + +T+ YI      T+PV+Y +++  IDSF  K  +E      +L++ F++ +S+IPR
Sbjct:    4 VDQILGDGAVADLCLWKDKINSGITLVMATLFWFLLEFMEARLVPLLCSILLLLMLILFLWAKFGEVFFTRRPPTPEELNQPDSPL----KALFSMMEGHLLMLYEIAYGKDNKTFLKTILYVAIIYNIGSYISLLTILYICLVCSMTIPVVYMQFQELIDSFMGKVSEE----KNNLLEVFKQVVSKIPR 186          
BLAST of EY756867 vs. ExPASy Swiss-Prot
Match: RTNLM_ARATH (Reticulon-like protein B13 OS=Arabidopsis thaliana GN=RTNLB13 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.097e-16
Identity = 49/166 (29.52%), Postives = 86/166 (51.81%), Query Frame = 3
Query:  312 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFGLLHTVPVIYEKYEGQIDSFGEKGHDEXQKHMQSL 809
            DI+LWR KK++   L  +T+ W+L     +  IT+V  I I  ++++FLW +    ++K  PE+  + + E+FV+E   + R  +   +  +  + +  +   F   + G W+LS +GN  +F T  +I   +  TVP ++E+Y  QI           QKH+ SL
Sbjct:   18 DIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLSKVEPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIGNLLDFHTCLFIGLVMGLTVPKLWEEYGDQI-----------QKHLGSL 172          
The following BLAST results are available for this feature:
BLAST of EY756867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
RTNLJ_ARATH3.634e-2836.81Reticulon-like protein B10 OS=Arabidopsis thaliana... [more]
RTNLN_ARATH1.804e-2734.67Reticulon-like protein B14 OS=Arabidopsis thaliana... [more]
RTNLK_ARATH2.605e-2637.50Reticulon-like protein B11 OS=Arabidopsis thaliana... [more]
RTNLP_ARATH1.688e-2531.40Reticulon-like protein B16 OS=Arabidopsis thaliana... [more]
RTNLO_ARATH2.136e-2032.46Reticulon-like protein B15 OS=Arabidopsis thaliana... [more]
RTNLM_ARATH1.097e-1629.52Reticulon-like protein B13 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-014-E10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756867 ID=EY756867; Name=EY756867; organism=Citrus sinensis; type=EST; length=858bp
CCACGCGTCCGGCTCCTTGTTCCCACCGAGTCTCGCTCTCTCTCGTTCTA
GAGTCTAGTACATTTTTCAATTCATTTTCATCGGCGCTTACTCGGCGGCA
GAGATCTATGGCGGAACATGCACCTGAGCACGAATCAGCCGACAAATCAC
TGGTGGAGAAGATCACGGATAAGATCCATGGCCACGACTCCTCGTCATCT
GACTCCGATGACGACAAGCCGTCGTCTATTGACGCCTTTAAGTCCAAAGT
ATTCAGGCTCTTCGGAAGAGAAAAACCTATTCACCATGTCCTCGGAGCTG
GAAAACCTGCTGATATTTTCCTATGGAGGAACAAGAAAATCTCTGCTGGT
GTGCTAGGTGGAGCCACTGCAATGTGGGTTCTCTTTGAGTTGCTGGAATA
CCATTTAATCACTTTGGTCTGCCATATATCGATTCTCTCTCTGGCTGTTC
TCTTCCTGTGGTCCAATGCATCCACATTTATCAACAAATCACCGCCAGAG
ATTCCAGTTGTTACACTTCCTGAGAAGTTTGTCCTTGAATTCGCCTCTGC
CTTGAGGTATGAAATCAACCGAGCCTTGGCTGTCCTGCGGGAAATTGCGT
CTGGAAGGGACTTGAAGAAGTTTCTTGGTGTCATTGCTGGCTTGTGGCTT
TTGTCTATTGTCGGTAATTGGTGCAACTTCGTGACATTATTCTACATTGT
ATTTGGTTTGCTACACACCGTGCCCGTGATTTATGAGAAGTACGAGGGAC
AGATTGATTCATTTGGTGAGAAAGGGCACGATGAGATNCAGAAGCATATG
CAGTCTTTGATGAAAGGTTTTGAAGAAGGTTTGAGTCGAATTCCAAGGTG
CANTTGAG
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