EY756859

Overview
NameEY756859
Unique NameEY756859
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756859 vs. ExPASy Swiss-Prot
Match: UPL6_ARATH (E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana GN=UPL6 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.876e-20
Identity = 69/227 (30.40%), Postives = 122/227 (53.74%), Query Frame = 3
Query:   48 LMLKVPRFVDFDNKRAHFRSKIKHQHDHHHSP-----LRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGE-----EGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNS-VYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTY-HDIEAIDPDYFKNLKWM--LENDISDVLDLTFSIDADXEKLILYERAQVTDYELIPG 686
            ++++ P  + F ++   F +++      H S       R  +RR +ILED+YNQ+   S  DL+  + V F  E      GID GG+ +++ + ++R  FD    LF    +   + PNP S +   +HL +F F+G ++ KA+F+G L+D+ F  +F+   L  K  Y +D+ ++DP+ +++L ++   + DISD L+L F I       +  E  + T+ EL+PG
Sbjct:  630 ILMQAPFLIPFTSRVKIFTTQLATARQSHGSQGIFARNRFRIRRDHILEDAYNQMSALSEDDLRSSIRVTFVNELGVEEAGIDGGGIFKDFMEKITRAAFDVQYGLFKETADHMLY-PNPGSGMIHEQHLQFFHFLGSLLAKAMFEGILVDIPFA-TFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKRYKGDISD-LELYFVI-------LNNEYGERTEEELLPG 846          
BLAST of EY756859 vs. ExPASy Swiss-Prot
Match: UBE3A_MOUSE (Ubiquitin-protein ligase E3A OS=Mus musculus GN=Ube3a PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.435e-18
Identity = 56/163 (34.36%), Postives = 98/163 (60.12%), Query Frame = 3
Query:  144 LRISVRRAYILEDSYNQLRMRSTQ---DLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWML--ENDISDVLDLTFSI 617
            L + VRR +I++D+  +L M + +   DLK +L V F+GE+G+D GG+++E++QL+   IF+    +FT       F  NP+S ++TE    F  +G ++G A+++  +LDVHF    Y+ ++G K T+ D+    P  +++LK +L  E  + D + +TF I
Sbjct:  534 LTLKVRRDHIIDDALVRLEMIAMENPADLKKQLYVEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIGMFTYDEATKLFWFNPSS-FETE--GQFTLIG-ILGLAIYNNCILDVHFPMVVYRKLMGKKGTFRDLGDSHPVLYQSLKDLLEYEGSVEDDMMITFQI 692          
BLAST of EY756859 vs. ExPASy Swiss-Prot
Match: UBE3C_HUMAN (Ubiquitin-protein ligase E3C OS=Homo sapiens GN=UBE3C PE=1 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 1.434e-17
Identity = 63/212 (29.72%), Postives = 109/212 (51.42%), Query Frame = 3
Query:   33 EKSFSLMLKVPRFVDFDNKRAHFRSKI--KHQHDHHHSP----LRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQG-----EEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNP--NSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVK--VTYHDIEAIDPDYFKNLKWM--LENDISDVLDLTFSI 617
            E+  +++ ++P  V F+ +   F+  I    Q      P    + +++RR YI ED+Y++L   +  DLK R+ VH        E GID GG+ RE+   L +  F+     F T  NE    PNP    +       ++ F+GR++GKAL++  L+++ F   F   +LG    V  H + ++DP+ +KNL ++   E+D+ + L L F++
Sbjct:  680 ERQLAVLTELPFVVPFEERVKIFQRLIYADKQEVQGDGPFLDGINVTIRRNYIYEDAYDKLSPENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLNELLKSGFNPNQGFFKTT-NEGLLYPNPAAQMLVGDSFARHYYFLGRMLGKALYENMLVELPFAGFFLSKLLGTSADVDIHHLASLDPEVYKNLLFLKSYEDDVEE-LGLNFTV 889          
BLAST of EY756859 vs. ExPASy Swiss-Prot
Match: UBE3C_MOUSE (Ubiquitin-protein ligase E3C OS=Mus musculus GN=Ube3c PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 3.194e-17
Identity = 62/212 (29.25%), Postives = 108/212 (50.94%), Query Frame = 3
Query:   33 EKSFSLMLKVPRFVDFDNKRAHFRSKI--KHQHDHHHSP----LRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQG-----EEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNP--NSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVK--VTYHDIEAIDPDYFKNLKWM--LENDISDVLDLTFSI 617
            E+  +++ ++P  V F+ +   F+  I    Q      P    + +++RR YI ED+Y++L   +  DLK R+ VH        E GID GG+ RE+   L +  F+     F T  NE    PNP    +       ++ F+GR++GKAL++  L+++ F   F   +LG    V  H + ++DP+ ++NL ++   E D+ + L L F++
Sbjct:  680 ERQLAILTELPFVVPFEERVKIFQRLIYADKQEVQGDGPFLDGINVTIRRNYIYEDAYDKLSPENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLNELLKSGFNPNQGFFKTT-NEGLLYPNPAAQMLVGDSFARHYYFLGRMLGKALYENMLVELPFAGFFLSKLLGTSADVDIHHLASLDPEVYRNLLFLKSYEEDVEE-LGLNFTV 889          
BLAST of EY756859 vs. ExPASy Swiss-Prot
Match: HUL4_ASHGO (Probable E3 ubiquitin-protein ligase HUL4 OS=Ashbya gossypii GN=HUL4 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.070e-16
Identity = 59/167 (35.33%), Postives = 90/167 (53.89%), Query Frame = 3
Query:  144 LRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNE-----STFQPNPNSVYQTEHLS---YFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLE---NDISDVLDLTF 611
            L+I VRR ++  DS   ++ +  +DLK  L + F  E GIDAGGL +EW+ LL+R +F+    LF  V        S  +   + + Q E  S   Y+ F G V+G A+++  +LD+ F R+FYK I G  ++ +D   + P+   N+  MLE    D  D+  LTF
Sbjct:  477 LKIRVRREFVTTDSLRSIQNQQ-KDLKKSLRIEFVNEPGIDAGGLRKEWFLLLTRDLFNPNNGLFVYVPESRLCWFSIMESIEHELLQGEGSSSELYYLF-GVVLGLAIYNSTILDLKFPRAFYKKICGEVLSVNDFLELYPETGTNMLKMLEYDGEDFEDIFALTF 641          
BLAST of EY756859 vs. ExPASy Swiss-Prot
Match: HUL4_YEAST (Probable E3 ubiquitin-protein ligase HUL4 OS=Saccharomyces cerevisiae GN=HUL4 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 6.660e-15
Identity = 55/184 (29.89%), Postives = 89/184 (48.37%), Query Frame = 3
Query:  147 RISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFD--KGALLFTTVGNESTFQPNP----NSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWML---ENDISDVLDLTFSIDADXEKLILYERAQVTDY 671
            +I VRR  I  DS   ++      LK  L + F  E GIDAGGL +EW+ LL++ +F+   G  ++    + S F  +P     S  +   L  +   G V+G A+F+  +LD+ F ++ YK +    +++ D   + P+  +NL  ML   E++  DV  LTF         IL +     +Y
Sbjct:  522 KIKVRRDVISHDSLRCIKEHQGDLLKS-LRIEFVNEPGIDAGGLRKEWFFLLTKSLFNPMNGLFIYIKESSRSWFAIDPPNFDKSKGKNSQLELYYLFGVVMGLAIFNSTILDLQFPKALYKKLCSEPLSFEDYSELFPETSRNLIKMLNYTEDNFEDVFSLTFETTYRNNNWILNDSKSSKEY 704          
BLAST of EY756859 vs. ExPASy Swiss-Prot
Match: UPL7_ARATH (E3 ubiquitin-protein ligase UPL7 OS=Arabidopsis thaliana GN=UPL7 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.317e-14
Identity = 46/153 (30.07%), Postives = 85/153 (55.56%), Query Frame = 3
Query:  144 LRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGI-----DAGGLTREWYQLLSRVIFDKGALLFT-TVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLEND 584
            + I VRR +++ED + QL    ++ LK  + V F  E G+     D GGL++E+   +++  F     LF+ T  ++    P+P++ +    +   +F+GR+VGKAL++G LLD  F+  F + +LG      ++  +DP+ ++NL ++   D
Sbjct:  774 IEIVVRRGHVVEDGFQQLNSIGSR-LKSSIHVSFVNESGLPEAGLDYGGLSKEFLTDITKAAFATEYGLFSQTPTSDRLLVPSPSARHLENGIQMIEFLGRIVGKALYEGILLDYSFSHVFIQKLLGRYSFIDELSGLDPELYRNLMYVKHYD 925          
BLAST of EY756859 vs. ExPASy Swiss-Prot
Match: HERC3_HUMAN (Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.616e-14
Identity = 48/161 (29.81%), Postives = 88/161 (54.66%), Query Frame = 3
Query:  144 LRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLE---NDISDVLDLTFSI 617
            L + VRR  ++ D+  +L + S  DLK  L V F GEE +DAGG+T+E++ LL + + +    +FT   + +    +       EH ++F  +G   G A+++  ++D+HF  + YK +L VK    D++ + P   ++L+ +L+    D+ +   L F+I
Sbjct:  702 LVLHVRRNNLVGDALRELSIHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCF--VEH-NWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKPGLEDLKELSPTEGRSLQELLDYPGEDVEETFCLNFTI 859          
BLAST of EY756859 vs. ExPASy Swiss-Prot
Match: UPL5_ARATH (E3 ubiquitin-protein ligase UPL5 OS=Arabidopsis thaliana GN=UPL5 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.142e-13
Identity = 49/159 (30.82%), Postives = 79/159 (49.69%), Query Frame = 3
Query:  111 IKHQHDHHHSPLRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFD-KGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLEND 584
            +K   +  H  L   + R+ +L +S+  +   S + L G L + F+ EE    G L REW+ L+ + IF+ K  L   +  +   F PNP S     H  +F+F GRV+  AL     + V F R F+  + G+K++  DI+  D   + + K +LE D
Sbjct:  503 VKEDFEEMHEML---IDRSNLLSESFEYIVGASPEALHGGLFMEFKNEEATGPGVL-REWFYLVCQEIFNPKNTLFLRSADDFRRFSPNPASKVDPLHPDFFEFTGRVIALALMHKVQVGVLFDRVFFLQLAGLKISLEDIKDTDRIMYNSCKQILEMD 657          
BLAST of EY756859 vs. ExPASy Swiss-Prot
Match: HECD2_MOUSE (Probable E3 ubiquitin-protein ligase HECTD2 OS=Mus musculus GN=Hectd2 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.654e-13
Identity = 59/197 (29.95%), Postives = 93/197 (47.21%), Query Frame = 3
Query:  144 LRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILG--------------VKVTYHDIEAIDPDYFKNLKWML--ENDISDVLDLTFSIDADXEKLILYERAQVTDYELIPG 686
            L + VRR +++ DS ++L  R   DLK +L V F GE G+D GGLT+EW+ LL R IF     +FT          +  S ++ ++ S F+ VG ++G A+++   LD+ F    YK +L                 VT  D+  + P+    LK +L  E ++ +    TF +  +       E   +  Y L PG
Sbjct:  415 LNMKVRRTHLVSDSLDELT-RKRADLKKKLKVTFVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFT---YHKDSHCHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPVVPSDQSTPVGICSVTIDDLCQVMPELAHGLKELLSYEGNVEEDFYSTFQVFQE-------EFGVIKSYNLKPG 600          
The following BLAST results are available for this feature:
BLAST of EY756859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
UPL6_ARATH6.876e-2030.40E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis th... [more]
UBE3A_MOUSE6.435e-1834.36Ubiquitin-protein ligase E3A OS=Mus musculus GN=Ub... [more]
UBE3C_HUMAN1.434e-1729.72Ubiquitin-protein ligase E3C OS=Homo sapiens GN=UB... [more]
UBE3C_MOUSE3.194e-1729.25Ubiquitin-protein ligase E3C OS=Mus musculus GN=Ub... [more]
HUL4_ASHGO2.070e-1635.33Probable E3 ubiquitin-protein ligase HUL4 OS=Ashby... [more]
HUL4_YEAST6.660e-1529.89Probable E3 ubiquitin-protein ligase HUL4 OS=Sacch... [more]
UPL7_ARATH4.317e-1430.07E3 ubiquitin-protein ligase UPL7 OS=Arabidopsis th... [more]
HERC3_HUMAN9.616e-1429.81Probable E3 ubiquitin-protein ligase HERC3 OS=Homo... [more]
UPL5_ARATH2.142e-1330.82E3 ubiquitin-protein ligase UPL5 OS=Arabidopsis th... [more]
HECD2_MOUSE3.654e-1329.95Probable E3 ubiquitin-protein ligase HECTD2 OS=Mus... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-014-E02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756859 ID=EY756859; Name=EY756859; organism=Citrus sinensis; type=EST; length=911bp
CCACGCGTCCGCGTCAAAATCCTGGATTACTAGAGAAGTCTTTCTCACTC
ATGCTGAAGGTTCCTCGCTTTGTTGATTTTGACAATAAGCGTGCACATTT
CAGATCAAAAATAAAGCATCAACATGATCACCACCACAGTCCTTTGAGAA
TATCTGTAAGAAGAGCTTACATTCTTGAAGATTCATACAACCAACTGCGC
ATGCGATCAACGCAAGATTTGAAGGGAAGGTTGACTGTTCACTTTCAAGG
AGAGGAAGGCATTGATGCCGGTGGCCTTACAAGGGAGTGGTACCAATTGC
TGTCAAGGGTTATTTTTGACAAGGGAGCCCTACTTTTCACAACAGTGGGC
AATGAATCAACATTCCAGCCCAACCCCAACTCTGTTTACCAAACTGAACA
TCTTTCATATTTCAAGTTTGTTGGGCGAGTTGTTGGAAAAGCTCTTTTTG
ACGGGCAACTGTTGGATGTCCATTTTACTCGATCTTTCTACAAGCACATC
CTGGGGGTTAAAGTTACTTATCATGACATTGAAGCTATTGATCCAGATTA
CTTCAAAAACCTGAAGTGGATGCTTGAGAATGACATCAGTGATGTTCTTG
ACCTCACTTTTAGTATTGATGCTGATGANGAGAAGCTGATTTTGTATGAA
AGGGCGCAGGTAACCGACTATGAGCTAATTCCTGGNTGGACGATATTNAA
GGTACTNGAGAGAATAGCCACAGTATGTGGATTTAGGTGCNGAGCATCGT
TTGACGACTGCTATTCNGCCTCAATAAATGCTTTTCTGGAGGATTTACCC
AACTATTTCCTGGGGAGTTGAATTCTATCTCATGACAAGGGAATAAAATA
TTGATTAGGGGGCTTCGGAAATTGATTTGGATGATTGAGGGCAATCCGGA
TTTTCTGAATA
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