EY756858

Overview
NameEY756858
Unique NameEY756858
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length777
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13335 contig Csv1_Contig13335:694..1473. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756858 vs. ExPASy Swiss-Prot
Match: PME_PETIN (Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.144e-45
Identity = 93/188 (49.47%), Postives = 114/188 (60.64%), Query Frame = 1
Query:    4 RVRAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWD-GNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAG-SSWLGSTGFPF 561
            ++  YQDTLYVH+ RQF+ +C I GTVDFIFGN  AVLQNC +  RKP   Q  MVTAQGR +P Q   IV+Q   I   +D   +     TYLGRPWKEYSRT+IMQS I   I P GW  W+  NF  +T +Y E+QN G GA    R+ WKGF+   +   AQ FT G +I    +WL     P+
Sbjct:  180 QIDGYQDTLYVHTYRQFYRDCTITGTVDFIFGNGEAVLQNCKVIVRKPAQNQSCMVTAQGRTEPIQKGAIVLQNCEIKPDTDYFSLSPPSKTYLGRPWKEYSRTIIMQSYIDKFIEPEGWAPWNITNFGRDTSYYAEYQNRGPGAALDKRITWKGFQKGFTGEAAQKFTAGVYINNDENWLQKANVPY 367          
BLAST of EY756858 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 9.007e-44
Identity = 85/180 (47.22%), Postives = 119/180 (66.11%), Query Frame = 1
Query:   16 YQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEW-DGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTG 552
            +QDTLY HSNRQF+ +C + GT+DFIFG+AA V Q C I  R+P S Q N +TAQG+ DPNQ++G+ IQ+  I A  ++       PTYLGRPWKE+S TVIM++ I  V+ P+GW  W  G     ++ YGE++N G G+  + RVKW G++ + S  EA  FT  + + G+ W+ +TG
Sbjct:  406 FQDTLYPHSNRQFYRDCDVTGTIDFIFGSAAVVFQGCKIMPRQPLSNQFNTITAQGKKDPNQSSGMSIQRCTISANGNV-----IAPTYLGRPWKEFSTTVIMETVIGAVVRPSGWMSWVSGVDPPASIVYGEYKNTGPGSDVTQRVKWAGYKPVMSDAEAAKFTVATLLHGADWIPATG 580          
BLAST of EY756858 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.041e-40
Identity = 83/178 (46.63%), Postives = 111/178 (62.36%), Query Frame = 1
Query:   16 YQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNF--ALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAG-SSWL 540
            YQDTLY HSNRQ++ NC + GTVDFIFG    V Q C I  R+P   Q N +TA+G  + NQNTGI I +  I    ++     +  TYLGRPWK +S+TVIMQS I   ++PAGW  W+  +     T+FY E++N+G G+  S RVKW G++ I+S  EA  FT   F+ G  +W+
Sbjct:  786 YQDTLYTHSNRQYYRNCDVTGTVDFIFGAGTVVFQGCSIRPRQPLPNQFNTITAEGTQEANQNTGISIHQCTISPNGNV-----TATTYLGRPWKLFSKTVIMQSVIGSFVNPAGWIAWNSTYDPPPRTIFYREYKNSGPGSDLSKRVKWAGYKPISSDDEAARFTVKYFLRGDDNWI 958          
BLAST of EY756858 vs. ExPASy Swiss-Prot
Match: PME54_ARATH (Probable pectinesterase/pectinesterase inhibitor 54 OS=Arabidopsis thaliana GN=PME54 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.260e-37
Identity = 77/160 (48.12%), Postives = 102/160 (63.75%), Query Frame = 1
Query:    7 VRAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK-NMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEW--DGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVI 477
            +  YQDTLY  + RQF+  C I GT+DFIFGNAAAV Q+C+I  R+P+  +  N++ A GR D  QNTG  +   RI   SDL PV+  + +YLGRPW++YSR ++M+S I D I   GW  W   G+  L TL++GE +N G  A  S RV W+GF  I
Sbjct:  320 ISGYQDTLYAAALRQFYRECDIYGTIDFIFGNAAAVFQSCNIFLRRPHGVKAYNVILANGRTDQRQNTGFALHSCRIRTDSDLSPVKHKYSSYLGRPWRKYSRAIVMESYIDDAIAEGGWAGWLDSGDEVLKTLYFGEFKNYGPKARISKRVTWEGFHSI 479          
BLAST of EY756858 vs. ExPASy Swiss-Prot
Match: PME4_ARATH (Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.787e-37
Identity = 82/191 (42.93%), Postives = 110/191 (57.59%), Query Frame = 1
Query:    4 RVRAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRA-DPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLXL 573
            R   YQDTLYV++ RQF+ NC+++GTVDFIFG +A V+QN  I  RK + GQ N VTA G         GIV+Q  RI     L P + +  TYLGRPWK++S TVIM + + D+I P GW  WDG     +  Y E+ N G GA  + RV W   +V  SA E   FT  +++   +W+     P ++ L
Sbjct:  400 RFDGYQDTLYVNNGRQFYRNCVVSGTVDFIFGKSATVIQNTLIVVRKGSKGQYNTVTADGNELGLGMKIGIVLQNCRIVPDRKLTPERLTVATYLGRPWKKFSTTVIMSTEMGDLIRPEGWKIWDGESFHKSCRYVEYNNRGPGAFANRRVNWA--KVARSAAEVNGFTAANWLGPINWIQEANVPVTIGL 588          
BLAST of EY756858 vs. ExPASy Swiss-Prot
Match: PME51_ARATH (Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana GN=PME51 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.252e-37
Identity = 80/181 (44.20%), Postives = 103/181 (56.91%), Query Frame = 1
Query:   19 QDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDI----HARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFP----TYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSW 537
            QDTLY H  RQF+ NC I G VDFIFGN+AAV Q+C+I        P  G+KN VTAQGR DP+Q+TG V     I  T +   +  + P     +LGRPWK+YSRTV +  ++  +I P GW  W G+FAL TL+YGE +N G G+  S RV W              ++  +FI    W
Sbjct:  369 QDTLYAHGLRQFYKNCRIQGNVDFIFGNSAAVFQDCEILIAPRQINPEKGEKNAVTAQGRIDPSQSTGFVFLNCLINGTEEYMKLFKANPKVHKNFLGRPWKDYSRTVFIGCNLEALITPDGWLPWSGDFALKTLYYGESKNTGPGSDRSQRVSWSS---QIPDEHVHVYSVANFIQADEW 546          
BLAST of EY756858 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 8.165e-37
Identity = 79/186 (42.47%), Postives = 106/186 (56.99%), Query Frame = 1
Query:   19 QDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDI-----HARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSD-LKPVQGS---FPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGST 549
            QDTLY HS RQF+  C I G VDFIFGN+AAV Q+CDI     H++    G  N +TA GR D +Q+TG V     I  T + +K  Q +      +LGRPWKE+SRTV +  ++  +I P GW  W+G+FAL TL+YGE++N G G+  S RV W              ++  +FI    W  +T
Sbjct:  419 QDTLYAHSLRQFYKQCRIQGNVDFIFGNSAAVFQDCDILIASKHSKLEQGGANNAITAHGRIDASQSTGFVFLNCSINGTEEYMKEFQANPEGHKNFLGRPWKEFSRTVFVNCNLESLISPDGWMPWNGDFALKTLYYGEYKNTGPGSVRSSRVPWSS---EIPEKHVDVYSVANFIQADEWASTT 601          
BLAST of EY756858 vs. ExPASy Swiss-Prot
Match: PME_MEDSA (Pectinesterase/pectinesterase inhibitor OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.912e-36
Identity = 81/190 (42.63%), Postives = 109/190 (57.37%), Query Frame = 1
Query:   16 YQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFI------AGSSWLGSTGFPFSL 567
            +QDTLYV S RQF+ +C I+GT+DF+FG    V QNC +  R P  GQ+ +VTA GR   N  + +V Q S       L  V     +YLGRPWK+YS+ VIM S+I  +  P G+  W G+    T  Y E+ N G GA T+ RVKW G +V+TS   A+ + PG F       A  +W+  +G P+SL
Sbjct:  257 FQDTLYVQSQRQFYRDCSISGTIDFVFGERFGVFQNCKLVCRLPAKGQQCLVTAGGREKQNSASALVFQSSHFTGEPALTSVTPKV-SYLGRPWKQYSKVVIMDSTIDAIFVPEGYMPWMGSAFKETCTYYEYNNKGPGADTNLRVKWHGVKVLTSNVAAE-YYPGKFFEIVNATARDTWIVKSGVPYSL 444          
BLAST of EY756858 vs. ExPASy Swiss-Prot
Match: PME5_ARATH (Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 PE=2 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 2.011e-35
Identity = 83/191 (43.46%), Postives = 108/191 (56.54%), Query Frame = 1
Query:    4 RVRAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADP-NQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLXL 573
            R   YQDTLYV++ RQF+ N +++GTVDFIFG +A V+QN  I  RK N GQ N VTA G         GIV+Q  RI     L   +    +YLGRPWK++S TVI+ S I DVI P GW  WDG     +  Y E+ N G GA T+ RV W   ++  SA E   FT  +++   +W+     P +L L
Sbjct:  407 RFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLIVVRKGNKGQFNTVTADGNEKGLAMKIGIVLQNCRIVPDKKLAAERLIVESYLGRPWKKFSTTVIINSEIGDVIRPEGWKIWDGESFHKSCRYVEYNNRGPGAITNRRVNW--VKIARSAAEVNDFTVANWLGPINWIQEANVPVTLGL 595          
BLAST of EY756858 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.851e-35
Identity = 78/191 (40.84%), Postives = 110/191 (57.59%), Query Frame = 1
Query:    4 RVRAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQ-NTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLXL 573
            R   YQDTLYV++ RQF+ N +++GTVDFIFG +A V+QN  I  RK + GQ N VTA G         GIV+   RI A  +L+  + +  +YLGRPWK ++ T ++ + I D+I P GW+EW G     T  Y E  N G GA T+ RV W   ++  SA E + FT  +++  ++W+     P  L L
Sbjct:  396 RFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILCRKGSPGQTNHVTADGNEKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANTAARVPWA--KMAKSAAEVERFTVANWLTPANWIQEANVPVQLGL 584          
The following BLAST results are available for this feature:
BLAST of EY756858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
PME_PETIN2.144e-4549.47Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=... [more]
PME1_ARATH9.007e-4447.22Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 P... [more]
PME26_ARATH6.041e-4046.63Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME54_ARATH1.260e-3748.13Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME4_ARATH4.787e-3742.93Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 P... [more]
PME51_ARATH6.252e-3744.20Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME64_ARATH8.165e-3742.47Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME_MEDSA6.912e-3642.63Pectinesterase/pectinesterase inhibitor OS=Medicag... [more]
PME5_ARATH2.011e-3543.46Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 P... [more]
PME_BRANA5.851e-3540.84Probable pectinesterase/pectinesterase inhibitor O... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-014-E01-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756858 ID=EY756858; Name=EY756858; organism=Citrus sinensis; type=EST; length=777bp
CCACGCGTCCGAGCTTACCAAGACACACTCTACGTCCACTCGAACCGCCA
GTTCTTTGTGAACTGCTTAATTGCTGGCACGGTTGATTTTATTTTTGGTA
ACGCTGCAGCCGTGTTACAAAATTGTGACATCCATGCACGAAAGCCCAAT
TCCGGCCAAAAAAATATGGTCACAGCCCAAGGCAGGGCTGACCCTAACCA
AAACACCGGCATTGTCATTCAAAAATCTAGGATTGGTGCCACCTCCGATT
TAAAACCGGTTCAGGGTAGTTTCCCGACGTACCTCGGCAGGCCCTGGAAG
GAGTACTCGAGGACGGTGATCATGCAGTCATCGATTACTGACGTGATCCA
CCCTGCCGGGTGGCACGAGTGGGATGGTAACTTCGCGTTGAACACATTGT
TTTACGGAGAGCATCAGAACGCCGGAGCCGGTGCCGGAACTTCAGGGAGA
GTGAAATGGAAGGGATTTAGGGTTATTACAAGTGCTACCGAGGCTCAAGC
TTTTACTCCTGGAAGCTTCATTGCTGGTAGTAGCTGGCTGGGCTCCACTG
GTTTCCCATTCTCCCTTNGGTTGTAATATTCACTANGAGTTTAAATTATA
TGTTTTGGATTAGTGGATCATANGTCTCTGGNCTTTCATTTGTAATATTT
GATTGAGCGTGTCTTATTCGTGGCTTCGATTTCACAAATACTATTGTGTG
ATTTACAAGAAATTAAATAGCATGGGAAGAATAATATTTTCCGCTTCTTT
AATTAAAAAAAAAAAAAAAAAAGGCCG
back to top