EY756842

Overview
NameEY756842
Unique NameEY756842
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY756842 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.940e-11
Identity = 49/161 (30.43%), Postives = 81/161 (50.31%), Query Frame = 1 
Query:   76 HGNVKSSNVLLDKNGVACISDFGLSLLLNPVQA-----IARLGGYKAPEQAEVKRLSQKADVYSFGVLLLEVLTGRAPSQYPSPTRPRVDEEEQAVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVVSQPEKRPTMAEVAKMIEDIR 543
            H ++K++N+LLD+   A +SDFG S  +   Q      +A   GY  PE     + + K+DVYSFGV+L+E++TG  P         RV  EE    L       +KE    ++ D  +     + E+++++  +   C+  + + RP M EV+  +E IR
Sbjct:  552 HRDIKTTNILLDEKYRAKVSDFGTSRSVTLDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPLS-------RVRSEE-GRGLATHFLEAMKENRVIDIIDIRIKDESKL-EQVMAVAKLARKCLNRKGKNRPNMKEVSNELERIR 703
The following BLAST results are available for this feature:
BLAST of EY756842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
WAKLA_ARATH8.940e-1130.43Wall-associated receptor kinase-like 1 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-014-C06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756842 ID=EY756842; Name=EY756842; organism=Citrus sinensis; type=EST; length=854bp
TCCGTCGACCCACGCGTCCGGGCGGCTAGAGGGCTTGCAAGGATTCATCA
AGAGTATGGTACAGCCAAAGTACCACACGGAAATGTCAAGTCATCAAATG
TGTTACTTGACAAGAATGGTGTTGCTTGCATTTCTGATTTTGGGCTGTCA
CTGCTTTTAAATCCAGTTCAGGCAATTGCGAGATTAGGTGGGTACAAGGC
CCCTGAACAAGCTGAAGTTAAGAGACTTTCACAGAAGGCTGATGTGTACA
GTTTCGGAGTCTTGTTGTTGGAAGTGCTGACAGGCAGAGCTCCATCACAG
TACCCTTCGCCTACTCGTCCACGGGTAGACGAAGAGGAGCAGGCGGTGGA
CCTTCCAAAATGGGTGCGATCAGTGGTGAAGGAAGAGTGGACAGCAGAAG
TGTTCGATCAAGAACTTTTGAGGTATAAGAACATTGAAGAAGAGCTTGTG
TCAATGCTCCATGTGGGTCTAGCCTGTGTTGTGTCACAGCCCGAAAAGAG
GCCTACAATGGCAGAAGTTGCAAAGATGATTGAGGATATCAGAGTCGAGC
AGTCTCCTCTTGGAGAGGAATACGATGAATCGCGCAATTCACTCTCTCCT
TCCCTCGCAACCACTGAAGATGGACTAGCTGGTTACTGATTTTTCTGTCG
CGTATAATTAATTATCAGTGCTCAATTATTATTAGTTCATCATCCATGGG
GGNTGTATCATCATCATCACATTATCTCATTTGCATTTTCTCGCTGCAAA
TTGTCAGTATTGCAAGCTCTCCTCCTAAACTATGGGTGNNATATGNGTTC
TTTGCAATGTTTAAAGCCTTGTGTTTCCTTTTTAAAAANAAAAAAAAAAA
AAAA
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