EY756823
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756823 vs. ExPASy Swiss-Prot
Match: GLYA_SHESA (Serine hydroxymethyltransferase OS=Shewanella sp. (strain ANA-3) GN=glyA PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 5.986e-56 Identity = 115/259 (44.40%), Postives = 164/259 (63.32%), Query Frame = 2 Query: 23 GHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMGPGGHRMGT 796 GHL+HG ++ + +PY +DES G IDY+++E+ A +PK+++ G SAY+ + D+AR+R++ DK A + DMAH++GL+AAGV P+P +A VVT+TTHK+L GPRG +I +E+ K K+N AVFPG QGGP H I+G AVA K+ PE+KAYQ+QV+ N+ + LERGY +VSGGT+NHL+LV+L + + G + L S +I NKN+VP D S G R+GT Sbjct: 125 GHLTHG-----SPVNFSGRLYNIIPYGIDES-GKIDYDEMERLAVEHKPKMMIGGFSAYSGIVDWARMREIADKIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTSTTHKTLAGPRGGIILSAADDEELYK-----------KLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKAYQQQVVKNAKAMVEVFLERGYKIVSGGTDNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTSGVRIGT 366
BLAST of EY756823 vs. ExPASy Swiss-Prot
Match: GLYA_SHEHH (Serine hydroxymethyltransferase OS=Shewanella halifaxensis (strain HAW-EB4) GN=glyA PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 5.986e-56 Identity = 115/259 (44.40%), Postives = 162/259 (62.55%), Query Frame = 2 Query: 23 GHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMGPGGHRMGT 796 GHL+HG +S + + Y +DE+TG IDY ++E+ A +PK+I+AG SAY+ + D+ + R++ DK A + DMAH++GLVAAG+ PSP +A VVTTTTHK+L GPRG +I ++I K K+N AVFPG QGGP H I+ AVA K+ PE+ YQEQV+ N+ A++ +ERGYD+VSGGT+NHL L++L +K I G + L + +I NKN+VP D S G R+G+ Sbjct: 125 GHLTHG-----SHVSFSGKLYNAVQYGIDETTGKIDYAEVERLAVEHKPKMIIAGFSAYSGIVDWGKFREIADKVGAYLFVDMAHVAGLVAAGIYPSPMPHAHVVTTTTHKTLAGPRGGLILSAINDEDIYK-----------KLNSAVFPGGQGGPLMHVIAAKAVAFKEALDPEFTTYQEQVVVNAKAMARTFIERGYDVVSGGTDNHLFLLDLISKDITGKDADAALGNANITVNKNSVPNDPRSPFVTSGLRIGS 367
BLAST of EY756823 vs. ExPASy Swiss-Prot
Match: GLYA_RICPR (Serine hydroxymethyltransferase OS=Rickettsia prowazekii GN=glyA PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 5.986e-56 Identity = 124/271 (45.76%), Postives = 161/271 (59.41%), Query Frame = 2 Query: 23 GHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD-VSAMGPGGHRMGTQPSHLGSLXRKD 832 GHL+HG + +F T+ Y +D+ T IDY+++E+ A L PKL++AG SAY R D+A+ RK+ DK A ++AD+AHI+GLVA G SP YA VVT+TTHK+LRGPRG +I +EI K KIN A+FPGLQGGP H I+ AVA + PEYK Y +QV+SN+ A SL ERGYD+++GGT+NH+VLV+LR GI G L+ I NKN +P D S G R GT KD Sbjct: 125 GHLTHGAAPNIS-----GKWFNTVSYHVDQETYLIDYDEVERLAVLHNPKLLIAGFSAYPRKIDFAKFRKIADKVGAYLMADIAHIAGLVATGEHQSPIPYAHVVTSTTHKTLRGPRGGLIL--SDDEEIGK-----------KINSALFPGLQGGPLMHIIAAKAVAFLENLQPEYKNYIKQVISNAKALAISLQERGYDILTGGTDNHIVLVDLRKDGITGKCAANSLDRAGITCNKNAIPFDTTSPFITSGIRFGTPACTTKGFKEKD 377
BLAST of EY756823 vs. ExPASy Swiss-Prot
Match: GLYA_IDILO (Serine hydroxymethyltransferase OS=Idiomarina loihiensis GN=glyA PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 5.986e-56 Identity = 118/259 (45.56%), Postives = 162/259 (62.55%), Query Frame = 2 Query: 23 GHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMGPGGHRMGT 796 GHL+HG ++ + + Y LDESTG IDY ++EK A +PK+IVAG SAY+ + D+A+ R++ DK A ++ DMAH++GLVAAGV P+P YA VVTTTTHK+L GPRG +I ++++K K+N AVFPG QGGP H I+G AVA ++ PE+K YQ+QVL N++ +++ RGY +VS GT+NHL LV+L +K I G + L + I NKN VP D S G R+GT Sbjct: 125 GHLTHG-----SGVNFSGKLYNAVSYGLDESTGEIDYAEVEKLAQEHKPKVIVAGFSAYSGIVDWAKFREIADKVDAYLMVDMAHVAGLVAAGVYPNPVPYAHVVTTTTHKTLAGPRGGLIISGSDDEKLHK-----------KLNSAVFPGNQGGPLCHVIAGKAVAFQEALQPEFKDYQKQVLVNANAMVKTMQARGYKIVSNGTQNHLFLVDLIDKDITGKDADAALGNAFITVNKNAVPNDPRSPFVTSGLRLGT 367
BLAST of EY756823 vs. ExPASy Swiss-Prot
Match: GLYA_BACTN (Serine hydroxymethyltransferase OS=Bacteroides thetaiotaomicron GN=glyA PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 5.986e-56 Identity = 116/263 (44.11%), Postives = 167/263 (63.50%), Query Frame = 2 Query: 23 GHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEI--NKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNK--GIDGSRVEKVLESVHIAANKNTVPGDV-SAMGPGGHRMGT 796 GHLSHG +T I + Y L++ TG +DY+Q+E+ A +PK+I+ G SAY+R +DY R+R++ DK A+++ DMAH +GL+AAG++ +P +YA +VT+TTHK+LRGPRG +I K K + + ++ AVFPG+QGGP H I+ AVA ++ PEYK Y +QV N++ AQ+L++RG+ +VSGGT+NH +LV+LR+K + G EK L S I NKN VP D SA G R+GT Sbjct: 117 GHLSHGSLVNTS-----GIIYTPCEYNLNQETGRVDYDQMEEVALREKPKMIIGGGSAYSREWDYKRMREIADKVGAILMIDMAHPAGLIAAGLLENPVKYAHIVTSTTHKTLRGPRGGVIMMGKDFPNPWGKKTPKGEIKMMSQLLDSAVFPGVQGGPLEHVIAAKAVAFGEILQPEYKEYAKQVQKNAAILAQALIDRGFTIVSGGTDNHSMLVDLRSKYPDLTGKVAEKALVSADITVNKNMVPFDSRSAFQTSGIRLGT 374
BLAST of EY756823 vs. ExPASy Swiss-Prot
Match: GLYA_XANCP (Serine hydroxymethyltransferase OS=Xanthomonas campestris pv. campestris GN=glyA PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 7.818e-56 Identity = 113/259 (43.63%), Postives = 162/259 (62.55%), Query Frame = 2 Query: 23 GHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMGPGGHRMGT 796 GHL+HG K++A F + Y ++E G IDY+++++ A +PK+++AG SAY++ D+AR R + D A + DMAH++GLVAAGV PSP ++A VVT+TTHK+LRGPRG +I + +++ K K+ VFPG+QGGP H I+ AVA K+ PE+K YQ+QV+ N+ A +L+ RGY +VSGGTENHL+LV++ + + G E L HI NKN+VP D S G R+GT Sbjct: 125 GHLTHG-----AKVNASGKLFNAVQYGVNEQ-GLIDYDEVQRLATEHKPKMVIAGFSAYSQKIDWARFRAIADSVGAYLFVDMAHVAGLVAAGVYPSPMDHAHVVTSTTHKTLRGPRGGIILAKGAGEDLVK-----------KLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPEFKTYQQQVVKNAQAMANTLIARGYKIVSGGTENHLMLVDMIGRDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTSGLRLGT 366
BLAST of EY756823 vs. ExPASy Swiss-Prot
Match: GLYA_XANCB (Serine hydroxymethyltransferase OS=Xanthomonas campestris pv. campestris (strain B100) GN=glyA PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 7.818e-56 Identity = 113/259 (43.63%), Postives = 162/259 (62.55%), Query Frame = 2 Query: 23 GHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMGPGGHRMGT 796 GHL+HG K++A F + Y ++E G IDY+++++ A +PK+++AG SAY++ D+AR R + D A + DMAH++GLVAAGV PSP ++A VVT+TTHK+LRGPRG +I + +++ K K+ VFPG+QGGP H I+ AVA K+ PE+K YQ+QV+ N+ A +L+ RGY +VSGGTENHL+LV++ + + G E L HI NKN+VP D S G R+GT Sbjct: 125 GHLTHG-----AKVNASGKLFNAVQYGVNEQ-GLIDYDEVQRLATEHKPKMVIAGFSAYSQKIDWARFRAIADSVGAYLFVDMAHVAGLVAAGVYPSPMDHAHVVTSTTHKTLRGPRGGIILAKGAGEDLVK-----------KLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPEFKTYQQQVVKNAQAMANTLIARGYKIVSGGTENHLMLVDMIGRDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTSGLRLGT 366
BLAST of EY756823 vs. ExPASy Swiss-Prot
Match: GLYA_XANC8 (Serine hydroxymethyltransferase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=glyA PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 7.818e-56 Identity = 113/259 (43.63%), Postives = 162/259 (62.55%), Query Frame = 2 Query: 23 GHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMGPGGHRMGT 796 GHL+HG K++A F + Y ++E G IDY+++++ A +PK+++AG SAY++ D+AR R + D A + DMAH++GLVAAGV PSP ++A VVT+TTHK+LRGPRG +I + +++ K K+ VFPG+QGGP H I+ AVA K+ PE+K YQ+QV+ N+ A +L+ RGY +VSGGTENHL+LV++ + + G E L HI NKN+VP D S G R+GT Sbjct: 125 GHLTHG-----AKVNASGKLFNAVQYGVNEQ-GLIDYDEVQRLATEHKPKMVIAGFSAYSQKIDWARFRAIADSVGAYLFVDMAHVAGLVAAGVYPSPMDHAHVVTSTTHKTLRGPRGGIILAKGAGEDLVK-----------KLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPEFKTYQQQVVKNAQAMANTLIARGYKIVSGGTENHLMLVDMIGRDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTSGLRLGT 366
BLAST of EY756823 vs. ExPASy Swiss-Prot
Match: GLYA_DICNV (Serine hydroxymethyltransferase OS=Dichelobacter nodosus (strain VCS1703A) GN=glyA PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 7.818e-56 Identity = 114/259 (44.02%), Postives = 160/259 (61.78%), Query Frame = 2 Query: 23 GHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD-VSAMGPGGHRMGT 796 GHL+HG K+S + ++ Y +D+ G IDY+ + + A RPK+I+AG SAY+++ D+ R R++ D A ++ DMAH++GLVAAG+ P+P +ADVVT+TTHK+LRGPRG +I + E K+N A+FPG QGGP H I+ AVA K+ P ++ YQEQV+ N+ A+ + RGYD+VSGGT+NHL+LV+L NKG+ G L HI NKN+VP D S G R+GT Sbjct: 125 GHLTHG-----SKVSFSGKTYNSIGYGIDDK-GLIDYDAVAQLAEKHRPKMIIAGFSAYSQVLDFQRFREIADSVGAYLMVDMAHVAGLVAAGLYPNPVPFADVVTSTTHKTLRGPRGGIILAKANP------------TIEKKLNSAIFPGSQGGPLMHVIAAKAVAFKEALEPSFQKYQEQVVENAKTMAKVFIARGYDIVSGGTQNHLMLVSLINKGLTGKAANDALSRAHITVNKNSVPNDPQSPFVTSGIRIGT 365
BLAST of EY756823 vs. ExPASy Swiss-Prot
Match: GLYA1_PSEF5 (Serine hydroxymethyltransferase 1 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=glyA1 PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 7.818e-56 Identity = 115/259 (44.40%), Postives = 158/259 (61.00%), Query Frame = 2 Query: 23 GHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMGPGGHRMGT 796 GHL+HG +S+ + + Y +D + G IDY+++E+ A +PK+IVAG SAY+++ D+ R R++ DK A + DMAH++GLVAAGV P+P +ADVVTTTTHK+LRGPRG +I R E K+N AVFPG QGGP H I+ A+ K+ PE+KAYQEQV+ N+ A+ + RG+D+VSGGT+NHL L++L + I G + L I NKN+VP D S G R GT Sbjct: 125 GHLTHG-----AAVSSSGKLYNAIQYGID-ANGLIDYDEVERLAVEHKPKMIVAGFSAYSQILDFPRFREIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLILARANAD------------IEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQEQVVKNAQAMAEVFIARGFDVVSGGTKNHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSGLRFGT 365 The following BLAST results are available for this feature:
BLAST of EY756823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY756823 ID=EY756823; Name=EY756823; organism=Citrus sinensis; type=EST; length=914bpback to top |