EY756823
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756823 vs. ExPASy Swiss-Prot
Match: GLYA1_PSEAE (Serine hydroxymethyltransferase 1 OS=Pseudomonas aeruginosa GN=glyA1 PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 6.395e-58 Identity = 119/259 (45.95%), Postives = 162/259 (62.55%), Query Frame = 2 Query: 23 GHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD-VSAMGPGGHRMGT 796 GHL+HG K+S+ + + Y LD +TG IDY+++E+ A +PK+IVAG SAY++ D+ R R + DK A++ DMAH++GLVAAG+ P+P +ADVVTTTTHK+LRGPRG +I R +EI K K+N AVFPG QGGP H I+ AV K+ P +K YQ QV+ N+ A+ + RGYD+VSGGT+NHL+L++L +G+ G + L V I NKN VP D S G R+GT Sbjct: 125 GHLTHG-----AKVSSSGKLYNAVQYGLDTATGLIDYDEVERLAVEHKPKMIVAGFSAYSKTLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPIPFADVVTTTTHKTLRGPRGGLILARAN-EEIEK-----------KLNSAVFPGAQGGPLMHVIAAKAVCFKEALEPGFKDYQAQVIRNAKAMAEVFIGRGYDVVSGGTDNHLMLISLVRQGLTGKEADAALGRVGITVNKNAVPNDPQSPFVTSGIRIGT 366
BLAST of EY756823 vs. ExPASy Swiss-Prot
Match: GLYA_ACIC1 (Serine hydroxymethyltransferase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=glyA PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 8.352e-58 Identity = 115/259 (44.40%), Postives = 167/259 (64.48%), Query Frame = 2 Query: 23 GHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMGPGGHRMGT 796 GHL+HG+ +SA I+F ++ Y + TG ID++++ + A RPK+I AG +A R+ D+A ++ + AV++AD+AHISGLVA GV PSP +AD+++TTTHK+LRGPRGAM+ + Y +++AVFPGLQGGPHNHT + +AVAL + PE++ Y +++N++ A+ LL RG+DLVSGGT+NHL+LV+L +KG+ G V + L+ I N NTVP D P G R+GT Sbjct: 128 GHLTHGWP-----VSATGIWFRSVQYGVRRDTGRIDFDEVREVARRERPKVIFAGGTAIPRIIDFAAFAEIAREVNAVLVADIAHISGLVAGGVHPSPVGHADIISTTTHKTLRGPRGAMLMSTE--------------QYAKALDKAVFPGLQGGPHNHTTAAIAVALLEAMQPEFRDYARNIVANAAVLAEELLARGFDLVSGGTDNHLILVDLTSKGVAGKPVARALDRAGIELNYNTVPFDPRKPFDPSGIRLGT 367
BLAST of EY756823 vs. ExPASy Swiss-Prot
Match: GLYA1_PSESM (Serine hydroxymethyltransferase 1 OS=Pseudomonas syringae pv. tomato GN=glyA1 PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 8.352e-58 Identity = 117/259 (45.17%), Postives = 161/259 (62.16%), Query Frame = 2 Query: 23 GHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD-VSAMGPGGHRMGT 796 GHL+HG K+S + + Y +D +TG IDY+++E+ A +PK+++AG SAY++ D+ R R + DK A + DMAH++GLVAAG+ P+P YADVVTTTTHK+LRGPRG +I + K +E+ E K N AVFPG QGGP H I+ AV K+ P +K YQ+QV+ N+ AQ + RG+D+VSGGT+NHL LV+L +G+ G + L HI NKN+VP D S G R+GT Sbjct: 125 GHLTHG-----AKVSFSGKLYNAVQYGIDTTTGLIDYDEVERIAVECQPKMLIAGFSAYSKTLDFPRFRAIADKVGAYLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI--------LAKANEEL----EKKFNSAVFPGGQGGPLMHVIAAKAVCFKEAMEPGFKTYQQQVIDNAQAMAQVFITRGFDVVSGGTDNHLFLVSLIRQGLTGKEADAALGRAHITVNKNSVPNDPQSPFVTSGLRIGT 366
BLAST of EY756823 vs. ExPASy Swiss-Prot
Match: GLYA_NATTJ (Serine hydroxymethyltransferase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=glyA PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 1.091e-57 Identity = 117/261 (44.83%), Postives = 169/261 (64.75%), Query Frame = 2 Query: 23 GHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDVSAMGP---GGHRMGT 796 GHL+HG ++ +F Y + E TG ID++++ + A +PK+IVAGASAY R+ D+A R++ D+ A ++ DMAHI+GLVAAG+ P+P YAD VTTTTHK+LRGPRG ++ ++ Y+ +I++A+FPGLQGGP H I+ AV+ ++ + E+K YQ+QV+ N+S A L GYDLV+GG++NHL+LV+L+ KG+ G + E+VL+ VHI NKN VP D GP G R+GT Sbjct: 121 GHLTHG-----SPVNISGKYFNFHHYGILEDTGKIDFDKVRELAKEHKPKMIVAGASAYPRIIDFATFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYADFVTTTTHKTLRGPRGGVVLCKE--------------EYKKEIDKAMFPGLQGGPLMHVIASKAVSFQEALSSEFKNYQKQVIKNASVLADELNNLGYDLVAGGSDNHLMLVDLQKKGVTGKKAERVLDDVHITVNKNAVPNDPE--GPFVTSGLRLGT 360
BLAST of EY756823 vs. ExPASy Swiss-Prot
Match: GLYA_STRM5 (Serine hydroxymethyltransferase OS=Stenotrophomonas maltophilia (strain R551-3) GN=glyA PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 2.430e-57 Identity = 117/259 (45.17%), Postives = 165/259 (63.71%), Query Frame = 2 Query: 23 GHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMGPGGHRMGT 796 GHL+HG K++A F + Y +++ G IDY+++E+ A +PK++VAG SAY+++ D+AR R + DK A + DMAH++GLVAAGV PSP E+A VVT+TTHK+LRGPRG +I + +++ K K+ VFPG+QGGP H I+G AVA K+ P +KAYQ+QV+ N+ A +L+ RGY +VSGGT+NHL+LV++ K + G E L HI NKN+VP D S G R+GT Sbjct: 125 GHLTHG-----AKVNASGKLFNAVQYGVNDQ-GLIDYDEVERLALEHKPKMVVAGFSAYSQVIDWARFRAIADKVGAYLFVDMAHVAGLVAAGVYPSPLEHAHVVTSTTHKTLRGPRGGIIVAKGAGEDLVK-----------KLQSIVFPGIQGGPLMHVIAGKAVAFKEALEPGFKAYQQQVVKNAQAMANTLIARGYKIVSGGTQNHLMLVDMIGKDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTSGLRLGT 366
BLAST of EY756823 vs. ExPASy Swiss-Prot
Match: GLYA_PSEU5 (Serine hydroxymethyltransferase OS=Pseudomonas stutzeri (strain A1501) GN=glyA PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 2.430e-57 Identity = 117/259 (45.17%), Postives = 166/259 (64.09%), Query Frame = 2 Query: 23 GHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMGPGGHRMGT 796 GHL+HG +S+ + + Y +++ G IDY+++E+ A +PK+IVAG SAY++ D+AR R++ DK A + DMAH++GLVAAGV P+P +ADVVTTTTHK+LRGPRG +I + K+ +E+ E K+N AVFPG QGGP H I+ AV K+ PE+KAYQ+QV+ N+ A+ ++RG+D+VSGGT+NHL L++L + I G + L HI NKN+VP D S G R+GT Sbjct: 125 GHLTHG-----ASVSSSGKLYNAVQYGINDQ-GLIDYDEVERLAVEHKPKMIVAGFSAYSQKLDFARFREIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLI--------LAKKNEEI----EKKLNSAVFPGAQGGPLEHVIAAKAVCFKEALQPEFKAYQQQVVKNAQAMAEVFIQRGFDVVSGGTQNHLFLLSLIKQDITGKDADAALGRAHITVNKNSVPNDPRSPFVTSGLRIGT 365
BLAST of EY756823 vs. ExPASy Swiss-Prot
Match: GLYA_GEOSL (Serine hydroxymethyltransferase OS=Geobacter sulfurreducens GN=glyA PE=3 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 3.174e-57 Identity = 119/259 (45.95%), Postives = 159/259 (61.39%), Query Frame = 2 Query: 23 GHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMGPGGHRMGT 796 GHL+HG ++ FF +PY + + T ID+ ++E+ A +PK+IV GASAY R D+A R + DK AV++ DMAHI+GLVAAG+ PSP YA+ VTTTTHK+LRGPRG MI R+ Y +N +FPG+QGGP H I+ AVALK+ PE+KAYQ Q++ N+ A L++RG+ LVSGGT+NHL+LVNL + G E+ L+ I NKNTVP + S G R+GT Sbjct: 121 GHLTHG-----SPVNFSGRFFNVVPYGVSQETETIDFNEVERLALEHKPKMIVVGASAYPRTIDFAAFRIIADKVGAVIMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRGPRGGMILCRE--------------EYAKTLNSNIFPGIQGGPLMHVIAAKAVALKEALQPEFKAYQAQIVKNAKALADELVKRGFRLVSGGTDNHLMLVNLTGTELTGKVAEESLDKAGITVNKNTVPFETRSPFVTSGFRIGT 360
BLAST of EY756823 vs. ExPASy Swiss-Prot
Match: GLYA_GEOMG (Serine hydroxymethyltransferase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=glyA PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 4.145e-57 Identity = 117/259 (45.17%), Postives = 159/259 (61.39%), Query Frame = 2 Query: 23 GHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMGPGGHRMGT 796 GHL+HG ++ FF +PY + + T ID+ ++E+ A +PKLIV GASAY R+ D+A R + DK A+++ DMAHI+GLVAAG+ PSP YA+ VTTTTHK+LRGPRG MI R+ + +N +FPG+QGGP H I+ AVA K+ PE+K YQEQ++ N+ A L++RG+ LVSGGT+NHL+LVNL + G E+ L+ I NKNTVP + S G R+GT Sbjct: 121 GHLTHG-----SPVNFSGRFFNVVPYGVSQETETIDFNEVERLALEHKPKLIVVGASAYPRVLDFAAFRAIADKVGALVMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRGPRGGMILCRE--------------EFAKTLNSNIFPGIQGGPLMHVIAAKAVAFKEALAPEFKLYQEQIVKNARTLADELMKRGFRLVSGGTDNHLMLVNLTGTELTGKVAEEALDKAGITVNKNTVPFETRSPFVTSGFRIGT 360
BLAST of EY756823 vs. ExPASy Swiss-Prot
Match: GLYA_CLOPH (Serine hydroxymethyltransferase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=glyA PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 4.145e-57 Identity = 119/272 (43.75%), Postives = 163/272 (59.93%), Query Frame = 2 Query: 23 GHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD-VSAMGPGGHRMGTQPSHLGSLXRKDL 835 GHL+HG ++ +F +PY +D++ G+IDYE++EK A +PKLIVAGASAYAR D+ R R++ D A ++ DMAHI+GLVAAG SP YA V TTTTHK+LRGPRG MI +A E K+N+++FPG QGGP H I+ A+ K+ +K Y +++SN+ A L RG++LVSGGT+NHL+L++L+N I G E +L+ +I NKNTVP D S G R+GT KD+ Sbjct: 124 GHLTHG-----SPVNFSGSYFNIVPYGVDDN-GFIDYEEVEKIAKECKPKLIVAGASAYARKIDFKRFREIADLVGAYLMVDMAHIAGLVAAGYHQSPIPYAHVTTTTTHKTLRGPRGGMIL------------SSEEFAEEHKLNKSIFPGTQGGPLMHVIAAKAICFKEALDDSFKDYAGKIISNAGALANELTARGFNLVSGGTDNHLMLIDLQNMNITGKEAEHILDEANITCNKNTVPNDPASPFVTSGIRLGTPAITTRGFNEKDM 377
BLAST of EY756823 vs. ExPASy Swiss-Prot
Match: GLYA_CLOB8 (Serine hydroxymethyltransferase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=glyA PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 4.145e-57 Identity = 117/259 (45.17%), Postives = 160/259 (61.78%), Query Frame = 2 Query: 23 GHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSAALFRPKLIVAGASAYARLYDYARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGQEVMYAYEDKINQAVFPGLQGGPHNHTISGLAVALKQVKTPEYKAYQEQVLSNSSKFAQSLLERGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGDV-SAMGPGGHRMGT 796 GHL+HG ++ F + Y +D+ T IDYE + K A +PKLIVAGASAYAR+ D+ + R++ D+ A+++ DMAHI+GLVAAGV PSP Y+D VTTTTHK+LRGPRG +I ++ Y +N+ +FPG+QGGP H I+ AV K+ P +K Y E V+ N + A+ L+ RG+ +VSGGT+NH+ LV+L NK I G E +L+SV I NKNTVP + S G R+GT Sbjct: 123 GHLTHG-----SPVNFSGKLFNFVSYGVDKETEMIDYENVRKLAIENKPKLIVAGASAYARILDFPKFREIADEVGALLMVDMAHIAGLVAAGVHPSPVPYSDFVTTTTHKTLRGPRGGLILCKE--------------KYAQILNKNIFPGIQGGPLEHIIAAKAVCFKEALDPSFKTYGENVVENCKELAEQLIARGFKIVSGGTDNHVFLVDLNNKDITGKEAEALLDSVGITVNKNTVPNETRSPFVTSGIRIGT 362 The following BLAST results are available for this feature:
BLAST of EY756823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY756823 ID=EY756823; Name=EY756823; organism=Citrus sinensis; type=EST; length=914bpback to top |