EY756820
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756820 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 1.676e-59 Identity = 111/147 (75.51%), Postives = 122/147 (82.99%), Query Frame = 2 Query: 11 AKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 451 A+NGVKFGEA WFKAG+QIFS+GGLDYLGNP+L+HAQS+LAIWACQVVLMG VEGYRI +FDPLGLA+ P FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+E+L DHIADPV NNAW ATNFVPGK Sbjct: 120 ARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNNAWLIATNFVPGK 266
BLAST of EY756820 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 2.120e-54 Identity = 101/145 (69.66%), Postives = 117/145 (80.69%), Query Frame = 2 Query: 11 AKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 445 AK+G KFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQ+I+A A QV+LMG +EGYR+ +FDPLGLADDPD FAELKVKE+KNGRLA FSMFGFFVQAIVTGKGP++NL DH+A+P NNA+A+AT F P Sbjct: 107 AKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKFTP 251
BLAST of EY756820 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 2.344e-53 Identity = 103/144 (71.53%), Postives = 114/144 (79.17%), Query Frame = 2 Query: 20 GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXA-FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 448 GV+F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+ QV+LMG VEG+RI FDPLGLADDP FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL+DH+ DPVANNAW +AT F PG Sbjct: 124 GVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANNAWVFATKFAPG 267
BLAST of EY756820 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.520e-52 Identity = 103/143 (72.03%), Postives = 112/143 (78.32%), Query Frame = 2 Query: 23 VKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXA-FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 448 V F E VWFKAG+QIFS+GGLDYLGNPNL+HAQSILA+ QVVLMG VEG+RI FDPLGLADDP FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT FVPG Sbjct: 122 VDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPG 264
BLAST of EY756820 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 1.985e-52 Identity = 102/142 (71.83%), Postives = 112/142 (78.87%), Query Frame = 2 Query: 20 GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 445 GVKFGE VWFKAGAQIFSEGGLDYLG+P LIHAQ+I+A A QVVLMG +EGYR+ +FDPLGLADDPD FAELKVKE+KNGRLAMFS FGFFVQAIVTGKGPI+NL DH+ADP NNA+A AT F P Sbjct: 113 GVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNNAFAAATKFTP 254
BLAST of EY756820 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.422e-50 Identity = 98/145 (67.59%), Postives = 114/145 (78.62%), Query Frame = 2 Query: 14 KNGVKFGEA-VWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVP 445 ++G+KFG+A +WFKAGA IF +GGL+YLGNP+LIHAQ+I+A A QVVLMG VEGYR+ AFDPLGLADDPD FAELKVKE+KNGRLAMF+ GFFVQAIVTGKGPIENL DH+A+P NNA+AYAT F P Sbjct: 128 EDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENNAFAYATKFTP 272
BLAST of EY756820 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.472e-47 Identity = 96/145 (66.21%), Postives = 107/145 (73.79%), Query Frame = 2 Query: 20 GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXA--FDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 448 GV+FGE VWFKAGAQIF++GGL+YLGN +LIHAQSI+A A QVVLMG E YR FDPLGLADDPD FAELKVKE+KNGRLAMFS GFFVQAIVTGKGP++NL DH+ADP N A+A AT F PG Sbjct: 108 GVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAFASATKFTPG 252
BLAST of EY756820 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.627e-46 Identity = 97/143 (67.83%), Postives = 108/143 (75.52%), Query Frame = 2 Query: 20 GVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPG 448 G FGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIW +V+LMG VEGYRI +FD LGLA+D + FAELKVKELKNGRLAMFSMFGFFVQAIV+ K +ENL DH+ V NNA + TNFVPG Sbjct: 126 GQGFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGYRIARGPLGEVTDPLYPG-SFDSLGLAEDTEAFAELKVKELKNGRLAMFSMFGFFVQAIVSRKDRLENLADHLGWTVNNNALSNVTNFVPG 267
BLAST of EY756820 vs. ExPASy Swiss-Prot
Match: CB2F_SOLLC (Chlorophyll a-b binding protein 3B, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3B PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 5.235e-45 Identity = 88/116 (75.86%), Postives = 96/116 (82.76%), Query Frame = 2 Query: 104 NLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 451 +L+HAQSILAIWACQVVLMG VEGYRI +FDPLGLA+DP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHIADPV NNAWA+ATNFVPGK Sbjct: 152 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267
BLAST of EY756820 vs. ExPASy Swiss-Prot
Match: CB2E_SOLLC (Chlorophyll a-b binding protein 3A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3A PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 5.235e-45 Identity = 88/116 (75.86%), Postives = 96/116 (82.76%), Query Frame = 2 Query: 104 NLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 451 +L+HAQSILAIWACQVVLMG VEGYRI +FDPLGLA+DP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHIADPV NNAWA+ATNFVPGK Sbjct: 152 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267 The following BLAST results are available for this feature:
BLAST of EY756820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756820 ID=EY756820; Name=EY756820; organism=Citrus sinensis; type=EST; length=609bpback to top |