EY756808

Overview
NameEY756808
Unique NameEY756808
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length458
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9540 contig Csv1_Contig9540:601..1057. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY756808 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 9.664e-48
Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 3 
Query:    6 VRGYFTAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 290
            V GY  AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct:  172 VEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
[Close]
BLAST of EY756808 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.262e-47
Identity = 87/95 (91.58%), Postives = 92/95 (96.84%), Query Frame = 3 
Query:    6 VRGYFTAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 290
            + GY  AGGPLGEVTDP+YPGG+FDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWAYATNFVPGK
Sbjct:  184 IEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPGK 278
[Close]
BLAST of EY756808 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.262e-47
Identity = 89/95 (93.68%), Postives = 91/95 (95.79%), Query Frame = 3 
Query:    6 VRGYFTAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 290
            V GY  AGGPLGEV DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct:  175 VEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 269
[Close]
BLAST of EY756808 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 1.648e-47
Identity = 89/95 (93.68%), Postives = 91/95 (95.79%), Query Frame = 3 
Query:    6 VRGYFTAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 290
            V GY  AGGPLGEVTDP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA PVNNNAWAYATNFVPGK
Sbjct:  169 VEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVNNNAWAYATNFVPGK 263
[Close]
BLAST of EY756808 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 1.648e-47
Identity = 89/95 (93.68%), Postives = 91/95 (95.79%), Query Frame = 3 
Query:    6 VRGYFTAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 290
            V GY  AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct:  172 VEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266
[Close]
BLAST of EY756808 vs. ExPASy Swiss-Prot
Match: CB2D_SOLLC (Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 2.153e-47
Identity = 89/95 (93.68%), Postives = 91/95 (95.79%), Query Frame = 3 
Query:    6 VRGYFTAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 290
            V GY  AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct:   22 VEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 116
[Close]
BLAST of EY756808 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 2.153e-47
Identity = 89/95 (93.68%), Postives = 91/95 (95.79%), Query Frame = 3 
Query:    6 VRGYFTAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 290
            V GY  AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Sbjct:  173 VEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267
[Close]
BLAST of EY756808 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 2.153e-47
Identity = 89/95 (93.68%), Postives = 91/95 (95.79%), Query Frame = 3 
Query:    6 VRGYFTAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 290
            V GY  AGGPLGEVTDP+YPGGSFDPL LADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA+PVNNNAWAYATNFVPGK
Sbjct:  151 VEGYRIAGGPLGEVTDPIYPGGSFDPLALADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVNNNAWAYATNFVPGK 245
[Close]
BLAST of EY756808 vs. ExPASy Swiss-Prot
Match: CB2C_SOLLC (Chlorophyll a-b binding protein 1C, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1C PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 2.812e-47
Identity = 89/95 (93.68%), Postives = 91/95 (95.79%), Query Frame = 3 
Query:    6 VRGYFTAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 290
            V GY  AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct:  171 VEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
[Close]
BLAST of EY756808 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 2.812e-47
Identity = 89/95 (93.68%), Postives = 91/95 (95.79%), Query Frame = 3 
Query:    6 VRGYFTAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 290
            V GY  AGGPLGEV DPLYPGGSFDPLGLA+DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Sbjct:  171 VEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
The following BLAST results are available for this feature:
BLAST of EY756808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
CB24_PETSP9.664e-4894.74Chlorophyll a-b binding protein 25, chloroplastic ... [more]
CB2A_PINSY1.262e-4791.58Chlorophyll a-b binding protein type 2 member 1A, ... [more]
CB22_PEA1.262e-4793.68Chlorophyll a-b binding protein AB80, chloroplasti... [more]
CB23_SOYBN1.648e-4793.68Chlorophyll a-b binding protein 3, chloroplastic O... [more]
CB21_TOBAC1.648e-4793.68Chlorophyll a-b binding protein 16, chloroplastic ... [more]
CB2D_SOLLC2.153e-4793.68Chlorophyll a-b binding protein 1D (Fragment) OS=S... [more]
CB23_PETSP2.153e-4793.68Chlorophyll a-b binding protein 22R, chloroplastic... [more]
CB21_SOYBN2.153e-4793.68Chlorophyll a-b binding protein, chloroplastic (Fr... [more]
CB2C_SOLLC2.812e-4793.68Chlorophyll a-b binding protein 1C, chloroplastic ... [more]
CB2B_SOLLC2.812e-4793.68Chlorophyll a-b binding protein 1B, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-H06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756808 ID=EY756808; Name=EY756808; organism=Citrus sinensis; type=EST; length=458bp
CCCGCGTCCGGGGTTACTTTACCGCTGGAGGGCCGCTCGGTGAAGTGACT
GACCCATTGTACCCAGGTGGCAGCTTTGATCCATTGGGTTTGGCTGATGA
CCCGGAGGCTTTTGCTGAGCTCAAGGTTAAGGAAATCAAGAATGGAAGGT
TGGCTATGTTCTCCATGTTTGGTTTCTTCGTTCAGGCCATTGTCACCGGC
AAGGGACCGTTAGAGAACTTGGCCGACCACTTGGCTGACCCTGTCAATAA
CAATGCCTGGGCCTACGCCACCAACTTTGTCCCCGGAAAGTGAGCTTCGG
TTGATAAGAGTTTTTCTCTTTTCGGTTTCTTGGATATCATGTAAATCTGT
TGTGAGCTCATGGAAGCTTTAATTTGAGTTGTGATTATTTATAAAATGCT
TCAATTTGATCTANNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAA
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