EY756792

Overview
NameEY756792
Unique NameEY756792
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9615 contig Csv1_Contig9615:126..775. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756792 vs. ExPASy Swiss-Prot
Match: NIA_SPIOL (Nitrate reductase [NADH] OS=Spinacia oleracea GN=NIA PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.164e-14
Identity = 34/91 (37.36%), Postives = 57/91 (62.64%), Query Frame = 1
Query:    7 TPRPPFFKMGGEGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDIDSS 279
            T   PF  M    K+Y+++EV  HN     W+++ G VY+ T+FL DHPGG + +L   G D T++F+ + HS  AK ++++F +G++ S+
Sbjct:  541 TASTPF--MNTTSKMYSMSEVKKHNTADSAWIVVHGNVYNATRFLKDHPGGSDSILINAGTDCTEEFDAI-HSDKAKRLLEDFRIGELIST 628          
BLAST of EY756792 vs. ExPASy Swiss-Prot
Match: NIA2_HORVU (Nitrate reductase [NADH] (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.164e-14
Identity = 33/84 (39.29%), Postives = 54/84 (64.29%), Query Frame = 1
Query:   19 PFFKMGGEGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 270
            PF    G+ K +T++EV  H  ++  W+++ G VYD T FL DHPGG + +L   G D T++F+ + HS  AKA++D + +G++
Sbjct:  528 PFMNTAGD-KQFTMSEVRKHGSKESAWIVVHGHVYDCTAFLKDHPGGADSILINAGSDCTEEFDAI-HSDKAKALLDTYRIGEL 609          
BLAST of EY756792 vs. ExPASy Swiss-Prot
Match: NIA2_BRANA (Nitrate reductase [NADH], clone PBNBR1412 OS=Brassica napus GN=NIA2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.164e-14
Identity = 31/80 (38.75%), Postives = 53/80 (66.25%), Query Frame = 1
Query:   31 MGGEGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 270
            M    K+Y+++EV  HN  +  W+I+ G +YD T+FL DHPGG + +L   G D T++FE + HS  AK +++++ +G++
Sbjct:  535 MNTSAKMYSMSEVRKHNSVESAWIIVHGHIYDCTRFLKDHPGGSDSILINAGTDCTEEFEAI-HSDKAKKLLEDYRIGEL 613          
BLAST of EY756792 vs. ExPASy Swiss-Prot
Match: NIA1_HORVU (Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.164e-14
Identity = 33/84 (39.29%), Postives = 54/84 (64.29%), Query Frame = 1
Query:   19 PFFKMGGEGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 270
            PF    G+ K +T++EV  H  ++  W+++ G VYD T FL DHPGG + +L   G D T++F+ + HS  AKA++D + +G++
Sbjct:  531 PFMNTAGD-KQFTMSEVRKHGSKESAWIVVHGHVYDCTAFLKDHPGGADSILINAGSDCTEEFDAI-HSDKAKALLDTYRIGEL 612          
BLAST of EY756792 vs. ExPASy Swiss-Prot
Match: NIA_PETHY (Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.439e-14
Identity = 32/80 (40.00%), Postives = 52/80 (65.00%), Query Frame = 1
Query:   31 MGGEGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 270
            M    K+Y+++EV  HN     W+I+ G VYD T+FL DHPGG + +L   G D T++F+ + HS  AK ++++F +G++
Sbjct:  531 MNTASKMYSMSEVKKHNSADSAWIIVHGHVYDATRFLKDHPGGIDSILINAGTDCTEEFDAI-HSDKAKKLLEDFRIGEL 609          
BLAST of EY756792 vs. ExPASy Swiss-Prot
Match: NIA1_TOBAC (Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN=NIA1 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.103e-14
Identity = 31/80 (38.75%), Postives = 52/80 (65.00%), Query Frame = 1
Query:   31 MGGEGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 270
            M    K+Y+++EV  H+     W+I+ G +YD T+FL DHPGG + +L   G D T++F+ + HS  AK +++EF +G++
Sbjct:  527 MNTASKMYSMSEVRKHSSADSAWIIVHGHIYDATRFLKDHPGGSDSILINAGTDCTEEFDAI-HSDKAKKLLEEFRIGEL 605          
BLAST of EY756792 vs. ExPASy Swiss-Prot
Match: NIA1_ORYSJ (Nitrate reductase [NADH] 1 OS=Oryza sativa subsp. japonica GN=NIA1 PE=2 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 9.277e-14
Identity = 31/77 (40.26%), Postives = 52/77 (67.53%), Query Frame = 1
Query:   40 EGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 270
            +GK +T++EV  H+ +   W+++ G VYD T FL DHPGG + +L   G D T++F+ + HS  AKA++D + +G++
Sbjct:  540 DGKQFTMSEVRKHSSQDSAWIVVHGHVYDCTAFLKDHPGGADSILINAGTDCTEEFDAI-HSDKAKALLDTYRIGEL 615          
BLAST of EY756792 vs. ExPASy Swiss-Prot
Match: NIA1_ARATH (Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana GN=NIA1 PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 9.277e-14
Identity = 31/80 (38.75%), Postives = 52/80 (65.00%), Query Frame = 1
Query:   31 MGGEGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 270
            M    K+Y+++EV  HN     W+I+ G +YD T+FL DHPGG + +L   G D T++FE + HS  AK +++++ +G++
Sbjct:  541 MNTASKMYSISEVRKHNTADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFEAI-HSDKAKKLLEDYRIGEL 619          
BLAST of EY756792 vs. ExPASy Swiss-Prot
Match: NIA_BETVE (Nitrate reductase [NAD(P)H] OS=Betula verrucosa GN=NIA1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.067e-13
Identity = 30/80 (37.50%), Postives = 52/80 (65.00%), Query Frame = 1
Query:   31 MGGEGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 270
            M    K+++++EV  HN  +  W+I+ G +YD T FL DHPGG + +L   G D T++F+ + HS  AK M++++ +G++
Sbjct:  524 MNTSSKMFSMSEVKKHNSAESAWIIVHGHIYDCTHFLKDHPGGADSILINAGTDCTEEFDAI-HSDKAKKMLEDYRIGEL 602          
BLAST of EY756792 vs. ExPASy Swiss-Prot
Match: NIA2_TOBAC (Nitrate reductase [NADH] 2 OS=Nicotiana tabacum GN=NIA2 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.067e-13
Identity = 30/80 (37.50%), Postives = 52/80 (65.00%), Query Frame = 1
Query:   31 MGGEGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 270
            M    K+Y+++EV  H+     W+I+ G +YD T+FL DHPGG + +L   G D T++F+ + HS  AK ++++F +G++
Sbjct:  527 MNTASKMYSMSEVRKHSSADSAWIIVHGHIYDATRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDKAKKLLEDFRIGEL 605          
The following BLAST results are available for this feature:
BLAST of EY756792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
NIA_SPIOL4.164e-1437.36Nitrate reductase [NADH] OS=Spinacia oleracea GN=N... [more]
NIA2_HORVU4.164e-1439.29Nitrate reductase [NADH] (Fragment) OS=Hordeum vul... [more]
NIA2_BRANA4.164e-1438.75Nitrate reductase [NADH], clone PBNBR1412 OS=Brass... [more]
NIA1_HORVU4.164e-1439.29Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 S... [more]
NIA_PETHY5.439e-1440.00Nitrate reductase [NADH] OS=Petunia hybrida GN=NIA... [more]
NIA1_TOBAC7.103e-1438.75Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN... [more]
NIA1_ORYSJ9.277e-1440.26Nitrate reductase [NADH] 1 OS=Oryza sativa subsp. ... [more]
NIA1_ARATH9.277e-1438.75Nitrate reductase [NADH] 1 OS=Arabidopsis thaliana... [more]
NIA_BETVE2.067e-1337.50Nitrate reductase [NAD(P)H] OS=Betula verrucosa GN... [more]
NIA2_TOBAC2.067e-1337.50Nitrate reductase [NADH] 2 OS=Nicotiana tabacum GN... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-G02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756792 ID=EY756792; Name=EY756792; organism=Citrus sinensis; type=EST; length=650bp
TGCCCGACCCCGCGTCCGCCTTTTTTTAAAATGGGCGGAGAGGGCAAGGT
ATACACTTTGGCTGAGGTCTCTGGGCACAACGACCGCAAGGACTGTTGGC
TTATCATTGAGGGCAAGGTATATGATGTGACAAAATTCTTGGATGACCAT
CCTGGTGGAGACGAGGTATTGTTGTCTGCCACAGGAAAGGATGCGACTGA
CGACTTTGAGGATGTTGGTCACAGTAGCAGTGCAAAAGCGATGATGGATG
AATTCTATGTGGGTGACATTGATTCATCAACCGTTCCCACCAAGACCAAG
TACACCCCTCCCAAGCAGCCTCACTACAACCAAGACAAGACACCCGAGTT
TATTATAAAGCTCCTCCAGTTCCTAGTTCCTCTGCTAATCTTAGGATTGG
CTGTTGGCATCCGCTTCTATACCAAATCCGCTTAATGATACCTTGCAAGA
TAAAAATTGGAGAAACATTTACAATAAATCTATATCCGTTGCATTGCACC
TTGTTTTTACTAGTTGTTTGGAACTATTATCACCAGAAAATGTAGGGTTC
TTTATCTTTTTTGATGTCATGTGCTTGTGTTTGATAAGTGACCATTCACT
GCCCGCATGACTTGGAATGCAATGATCTATTTGCAGTTCNNNAAANNNNN
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