EY756792

Overview
NameEY756792
Unique NameEY756792
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9615 contig Csv1_Contig9615:126..775. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756792 vs. ExPASy Swiss-Prot
Match: NIA_SOLLC (Nitrate reductase [NADH] OS=Solanum lycopersicum GN=NIA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.699e-13
Identity = 30/80 (37.50%), Postives = 52/80 (65.00%), Query Frame = 1
Query:   31 MGGEGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 270
            M    K+Y+++EV  HN     W+I+ G +YD ++FL DHPGG + +L   G D T++F+ + HS  AK ++++F +G++
Sbjct:  532 MNTASKMYSMSEVRKHNSSDSAWIIVHGHIYDASRFLKDHPGGVDSILINAGTDCTEEFDAI-HSDKAKKLLEDFRIGEL 610          
BLAST of EY756792 vs. ExPASy Swiss-Prot
Match: FAD5_MORAP (Delta(5) fatty acid desaturase OS=Mortierella alpina GN=DES1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.525e-13
Identity = 36/80 (45.00%), Postives = 51/80 (63.75%), Query Frame = 1
Query:   40 EGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDIDSS 279
            +GK +T  E++ HN + D +L I G+VYDVTKFL  HPGG + LL   G+D T  FE      +A A+M ++YVG + S+
Sbjct:    5 QGKTFTWEELAAHNTKGDLFLAIRGRVYDVTKFLSRHPGGVDTLLLGAGRDVTPVFEMYHAFGAADAIMKKYYVGTLVSN 84          
BLAST of EY756792 vs. ExPASy Swiss-Prot
Match: NIA_CICIN (Nitrate reductase [NADH] OS=Cichorium intybus GN=NIA PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.013e-13
Identity = 29/73 (39.73%), Postives = 48/73 (65.75%), Query Frame = 1
Query:   52 YTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 270
            +T++EV  HN     W+++ G +YD T FL DHPGG + +L   G D T++F+ + HS  AK +++E+ VG++
Sbjct:  537 FTMSEVKKHNSADSAWIVVHGHIYDCTSFLKDHPGGSDSILLNAGTDCTEEFDAI-HSDKAKKLLEEYRVGEL 608          
BLAST of EY756792 vs. ExPASy Swiss-Prot
Match: NIA2_PHAVU (Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris GN=NIA2 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.854e-13
Identity = 30/80 (37.50%), Postives = 52/80 (65.00%), Query Frame = 1
Query:   31 MGGEGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 270
            M    K+++++EV  H+     W+I+ G VYD T+FL DHPGG + +L   G D T++F+ + HS  AK M++++ +G++
Sbjct:  509 MNTASKMFSVSEVKKHSSPDSAWIIVHGHVYDCTRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDKAKKMLEDYRIGEL 587          
BLAST of EY756792 vs. ExPASy Swiss-Prot
Match: FAD5B_DICDI (Delta(5) fatty acid desaturase B OS=Dictyostelium discoideum GN=fadB PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.750e-12
Identity = 34/79 (43.04%), Postives = 56/79 (70.89%), Query Frame = 1
Query:   46 KVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAK--AMMDEFYVGDIDS 276
            K+YT  EVS HN + D W+I++GKVY++TK++  HPGG+++LL + G+DAT+ FE   H  + K  +++ ++ +G I S
Sbjct:   13 KLYTWDEVSKHNQKNDLWIIVDGKVYNITKWVPLHPGGEDILLLSAGRDATNLFESY-HPMTDKHYSLIKQYEIGYISS 90          
BLAST of EY756792 vs. ExPASy Swiss-Prot
Match: FAD5A_DICDI (Delta(5) fatty acid desaturase A OS=Dictyostelium discoideum GN=fadA PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.750e-12
Identity = 35/80 (43.75%), Postives = 53/80 (66.25%), Query Frame = 1
Query:   43 GKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAK--AMMDEFYVGDIDS 276
            GK Y+ +E++ HN   DCW+ ++GKVYD+T+++  HPGG EVLL A G+D T+ FE   H  S K  +++  + +G I S
Sbjct:   13 GKQYSWSELAKHNTENDCWVAVDGKVYDITRWVPLHPGGKEVLLLAAGRDVTNLFESY-HPMSDKPTSILKNYEIGYISS 91          
BLAST of EY756792 vs. ExPASy Swiss-Prot
Match: NIA3_MAIZE (Nitrate reductase [NADH] 3 OS=Zea mays PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.091e-12
Identity = 29/73 (39.73%), Postives = 47/73 (64.38%), Query Frame = 1
Query:   52 YTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDI 270
            +T++EV  H  +   W+++ G VYD T FL DHPGG + +L   G D T++F+ + HS  AK ++D + +GD+
Sbjct:  523 FTMSEVRKHASQDSAWIVVHGHVYDCTAFLKDHPGGADSILINAGTDCTEEFDAI-HSDKAKELLDTYRIGDL 594          
BLAST of EY756792 vs. ExPASy Swiss-Prot
Match: NIA_PHYIN (Nitrate reductase [NADPH] OS=Phytophthora infestans GN=NIAA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.134e-11
Identity = 32/72 (44.44%), Postives = 44/72 (61.11%), Query Frame = 1
Query:   64 EVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDIDSS 279
            EV+ HN +K CW I    VYD T FLD+HPGG   +L   G D TD+FE + HS+ A  M+ ++ +G   S+
Sbjct:  544 EVAKHNSKKSCWFICRDLVYDATPFLDEHPGGATSILLCGGTDCTDEFESI-HSTKAWQMLKKYCIGRCSST 614          
BLAST of EY756792 vs. ExPASy Swiss-Prot
Match: NIA_EMENI (Nitrate reductase [NADPH] OS=Emericella nidulans GN=niaD PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.134e-11
Identity = 30/86 (34.88%), Postives = 56/86 (65.12%), Query Frame = 1
Query:   28 KMGGEGKVYTLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDIDSSTV 285
            K  G  ++  L E   ++  +  W ++ G+VYD T FL+ HPGG + ++SA G DA+++F ++ HS +AK MM ++++G +D +++
Sbjct:  507 KKEGVTRIIDLEEFKKNSSDERPWFVVNGEVYDGTAFLEGHPGGAQSIISAAGTDASEEFLEI-HSETAKKMMPDYHIGTLDKASL 591          
BLAST of EY756792 vs. ExPASy Swiss-Prot
Match: NIA_FUSOX (Nitrate reductase [NADPH] OS=Fusarium oxysporum GN=NIA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.481e-11
Identity = 28/76 (36.84%), Postives = 50/76 (65.79%), Query Frame = 1
Query:   55 TLAEVSGHNDRKDCWLIIEGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSAKAMMDEFYVGDIDSST 282
            T+ E+  H+  ++ W +++G+VYD T +L  HPGG   +  A G+DAT++F  + HS +AKAM+  +++G +D  +
Sbjct:  550 TIEELKAHSGEEEPWFVVKGEVYDGTPYLSGHPGGAASIFGAAGQDATEEFMAI-HSENAKAMLPTYHIGTLDEES 624          
The following BLAST results are available for this feature:
BLAST of EY756792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
NIA_SOLLC2.699e-1337.50Nitrate reductase [NADH] OS=Solanum lycopersicum G... [more]
FAD5_MORAP3.525e-1345.00Delta(5) fatty acid desaturase OS=Mortierella alpi... [more]
NIA_CICIN6.013e-1339.73Nitrate reductase [NADH] OS=Cichorium intybus GN=N... [more]
NIA2_PHAVU7.854e-1337.50Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris G... [more]
FAD5B_DICDI1.750e-1243.04Delta(5) fatty acid desaturase B OS=Dictyostelium ... [more]
FAD5A_DICDI1.750e-1243.75Delta(5) fatty acid desaturase A OS=Dictyostelium ... [more]
NIA3_MAIZE5.091e-1239.73Nitrate reductase [NADH] 3 OS=Zea mays PE=3 SV=1[more]
NIA_PHYIN1.134e-1144.44Nitrate reductase [NADPH] OS=Phytophthora infestan... [more]
NIA_EMENI1.134e-1134.88Nitrate reductase [NADPH] OS=Emericella nidulans G... [more]
NIA_FUSOX1.481e-1136.84Nitrate reductase [NADPH] OS=Fusarium oxysporum GN... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-G02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756792 ID=EY756792; Name=EY756792; organism=Citrus sinensis; type=EST; length=650bp
TGCCCGACCCCGCGTCCGCCTTTTTTTAAAATGGGCGGAGAGGGCAAGGT
ATACACTTTGGCTGAGGTCTCTGGGCACAACGACCGCAAGGACTGTTGGC
TTATCATTGAGGGCAAGGTATATGATGTGACAAAATTCTTGGATGACCAT
CCTGGTGGAGACGAGGTATTGTTGTCTGCCACAGGAAAGGATGCGACTGA
CGACTTTGAGGATGTTGGTCACAGTAGCAGTGCAAAAGCGATGATGGATG
AATTCTATGTGGGTGACATTGATTCATCAACCGTTCCCACCAAGACCAAG
TACACCCCTCCCAAGCAGCCTCACTACAACCAAGACAAGACACCCGAGTT
TATTATAAAGCTCCTCCAGTTCCTAGTTCCTCTGCTAATCTTAGGATTGG
CTGTTGGCATCCGCTTCTATACCAAATCCGCTTAATGATACCTTGCAAGA
TAAAAATTGGAGAAACATTTACAATAAATCTATATCCGTTGCATTGCACC
TTGTTTTTACTAGTTGTTTGGAACTATTATCACCAGAAAATGTAGGGTTC
TTTATCTTTTTTGATGTCATGTGCTTGTGTTTGATAAGTGACCATTCACT
GCCCGCATGACTTGGAATGCAATGATCTATTTGCAGTTCNNNAAANNNNN
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