EY756781

Overview
NameEY756781
Unique NameEY756781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length554
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_LUPPO (Ubiquitin OS=Lupinus polyphyllus PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.216e-20
Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_LUPAL (Ubiquitin OS=Lupinus albus PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.216e-20
Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_LINUS (Ubiquitin OS=Linum usitatissimum PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.216e-20
Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_HORVU (Ubiquitin OS=Hordeum vulgare GN=MUB1 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.216e-20
Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_HELAN (Ubiquitin OS=Helianthus annuus PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.216e-20
Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_EUPEU (Ubiquitin OS=Euplotes eurystomus PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.216e-20
Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   27 KTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_DESAN (Ubiquitin OS=Deschampsia antarctica PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.216e-20
Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_DAUCA (Ubiquitin OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.216e-20
Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_CHLRE (Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.216e-20
Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_BRARA (Ubiquitin OS=Brassica rapa PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.216e-20
Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
The following BLAST results are available for this feature:
BLAST of EY756781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
UBIQ_LUPPO6.216e-2094.00Ubiquitin OS=Lupinus polyphyllus PE=3 SV=1[more]
UBIQ_LUPAL6.216e-2094.00Ubiquitin OS=Lupinus albus PE=3 SV=1[more]
UBIQ_LINUS6.216e-2094.00Ubiquitin OS=Linum usitatissimum PE=3 SV=1[more]
UBIQ_HORVU6.216e-2094.00Ubiquitin OS=Hordeum vulgare GN=MUB1 PE=3 SV=1[more]
UBIQ_HELAN6.216e-2094.00Ubiquitin OS=Helianthus annuus PE=3 SV=1[more]
UBIQ_EUPEU6.216e-2094.00Ubiquitin OS=Euplotes eurystomus PE=3 SV=1[more]
UBIQ_DESAN6.216e-2094.00Ubiquitin OS=Deschampsia antarctica PE=2 SV=1[more]
UBIQ_DAUCA6.216e-2094.00Ubiquitin OS=Daucus carota PE=3 SV=1[more]
UBIQ_CHLRE6.216e-2094.00Ubiquitin OS=Chlamydomonas reinhardtii GN=UBI1 PE=... [more]
UBIQ_BRARA6.216e-2094.00Ubiquitin OS=Brassica rapa PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-F02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756781 ID=EY756781; Name=EY756781; organism=Citrus sinensis; type=EST; length=554bp
CCACGCGTCCGAAGATCCAGGATCACGAGGGGATTCCACCGGACCAGCAG
CGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCAGAACCCTAGCCGA
CTACAACATCCAAAAGGAGTCAACACTCCACCTCGTCCTCCGTCTCCGTG
GTGGCGCGAAGAAGCGTAAGAAGAAGACCTACACCAAGCCGAAAAAGATC
AAGCACAAGAAGAAGAAGGTCAAGCTCGCCGTCTTGCAGTTTTACAAGGT
CGATGATTCTGGAAAGGTCCAGAGGCTGAGGAAGGAGTGTCCGAATGCTG
AGTGTGGAGCCGGCACCTTCATGGCTAACCACTTTGACAGGCACTACTGC
GGCAAGTGTGGACTCACCTATGTTTACCAGAAGGCTGGCGGTGATTGATC
GAGATTAGGTGGTTGTTTTGCTATTTTTAATTAGTATTAATTACTATGGT
TTTTGTGGTTCAAAAATTATGACTCTTTCGTAATTTTGTTTGACTATATA
CTTGTTTGCTTGAGCGTTTTAATTAAATGGTTATCTGTTTTAAATTTTAA
AAAA
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