EY756781

Overview
NameEY756781
Unique NameEY756781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length554
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_AVESA (Ubiquitin OS=Avena sativa PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.216e-20
Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_AVEFA (Ubiquitin OS=Avena fatua PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.216e-20
Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_ASPOF (Ubiquitin OS=Asparagus officinalis PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.216e-20
Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_ARATH (Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.216e-20
Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_ACECL (Ubiquitin OS=Acetabularia cliftonii PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.216e-20
Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_ACACA (Ubiquitin OS=Acanthamoeba castellanii PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.216e-20
Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   27 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBL1_ORYSJ (Ubiquitin-like protein 1 OS=Oryza sativa subsp. japonica GN=UBL1 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.118e-20
Identity = 46/50 (92.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + K+QD EGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:   27 KAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_YEAST (Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19
Identity = 46/50 (92.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_XENLA (Ubiquitin OS=Xenopus laevis PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19
Identity = 46/50 (92.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_TETPY (Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19
Identity = 46/50 (92.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
The following BLAST results are available for this feature:
BLAST of EY756781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
UBIQ_AVESA6.216e-2094.00Ubiquitin OS=Avena sativa PE=1 SV=1[more]
UBIQ_AVEFA6.216e-2094.00Ubiquitin OS=Avena fatua PE=3 SV=1[more]
UBIQ_ASPOF6.216e-2094.00Ubiquitin OS=Asparagus officinalis PE=3 SV=1[more]
UBIQ_ARATH6.216e-2094.00Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=... [more]
UBIQ_ACECL6.216e-2094.00Ubiquitin OS=Acetabularia cliftonii PE=3 SV=1[more]
UBIQ_ACACA6.216e-2094.00Ubiquitin OS=Acanthamoeba castellanii PE=3 SV=1[more]
UBL1_ORYSJ8.118e-2092.00Ubiquitin-like protein 1 OS=Oryza sativa subsp. ja... [more]
UBIQ_YEAST1.385e-1992.00Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1... [more]
UBIQ_XENLA1.385e-1992.00Ubiquitin OS=Xenopus laevis PE=1 SV=1[more]
UBIQ_TETPY1.385e-1992.00Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-F02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756781 ID=EY756781; Name=EY756781; organism=Citrus sinensis; type=EST; length=554bp
CCACGCGTCCGAAGATCCAGGATCACGAGGGGATTCCACCGGACCAGCAG
CGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCAGAACCCTAGCCGA
CTACAACATCCAAAAGGAGTCAACACTCCACCTCGTCCTCCGTCTCCGTG
GTGGCGCGAAGAAGCGTAAGAAGAAGACCTACACCAAGCCGAAAAAGATC
AAGCACAAGAAGAAGAAGGTCAAGCTCGCCGTCTTGCAGTTTTACAAGGT
CGATGATTCTGGAAAGGTCCAGAGGCTGAGGAAGGAGTGTCCGAATGCTG
AGTGTGGAGCCGGCACCTTCATGGCTAACCACTTTGACAGGCACTACTGC
GGCAAGTGTGGACTCACCTATGTTTACCAGAAGGCTGGCGGTGATTGATC
GAGATTAGGTGGTTGTTTTGCTATTTTTAATTAGTATTAATTACTATGGT
TTTTGTGGTTCAAAAATTATGACTCTTTCGTAATTTTGTTTGACTATATA
CTTGTTTGCTTGAGCGTTTTAATTAAATGGTTATCTGTTTTAAATTTTAA
AAAA
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