EY756781

Overview
NameEY756781
Unique NameEY756781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length554
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_STRPU (Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19
Identity = 46/50 (92.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_SPOFR (Ubiquitin OS=Spodoptera frugiperda PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19
Identity = 46/50 (92.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_SCHPO (Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19
Identity = 46/50 (92.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   27 KSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_RAT (Ubiquitin OS=Rattus norvegicus GN=Rps27a PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19
Identity = 46/50 (92.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_RABIT (Ubiquitin OS=Oryctolagus cuniculus PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19
Identity = 46/50 (92.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_PONPY (Ubiquitin OS=Pongo pygmaeus GN=UBA52 PE=3 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19
Identity = 46/50 (92.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_PLUXY (Ubiquitin OS=Plutella xylostella PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19
Identity = 46/50 (92.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_PIG (Ubiquitin OS=Sus scrofa GN=UBA52 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19
Identity = 46/50 (92.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_PHYIN (Ubiquitin OS=Phytophthora infestans PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19
Identity = 46/50 (92.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   27 KQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY756781 vs. ExPASy Swiss-Prot
Match: UBIQ_PANTR (Ubiquitin OS=Pan troglodytes GN=UBB PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19
Identity = 46/50 (92.00%), Postives = 48/50 (96.00%), Query Frame = 3 
Query:    6 RPKIQDHEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 155
            + KIQD EGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   27 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
The following BLAST results are available for this feature:
BLAST of EY756781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
UBIQ_STRPU1.385e-1992.00Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV... [more]
UBIQ_SPOFR1.385e-1992.00Ubiquitin OS=Spodoptera frugiperda PE=3 SV=1[more]
UBIQ_SCHPO1.385e-1992.00Ubiquitin OS=Schizosaccharomyces pombe GN=ubi1 PE=... [more]
UBIQ_RAT1.385e-1992.00Ubiquitin OS=Rattus norvegicus GN=Rps27a PE=1 SV=1[more]
UBIQ_RABIT1.385e-1992.00Ubiquitin OS=Oryctolagus cuniculus PE=1 SV=1[more]
UBIQ_PONPY1.385e-1992.00Ubiquitin OS=Pongo pygmaeus GN=UBA52 PE=3 SV=2[more]
UBIQ_PLUXY1.385e-1992.00Ubiquitin OS=Plutella xylostella PE=3 SV=1[more]
UBIQ_PIG1.385e-1992.00Ubiquitin OS=Sus scrofa GN=UBA52 PE=3 SV=1[more]
UBIQ_PHYIN1.385e-1992.00Ubiquitin OS=Phytophthora infestans PE=1 SV=1[more]
UBIQ_PANTR1.385e-1992.00Ubiquitin OS=Pan troglodytes GN=UBB PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-F02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756781 ID=EY756781; Name=EY756781; organism=Citrus sinensis; type=EST; length=554bp
CCACGCGTCCGAAGATCCAGGATCACGAGGGGATTCCACCGGACCAGCAG
CGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCAGAACCCTAGCCGA
CTACAACATCCAAAAGGAGTCAACACTCCACCTCGTCCTCCGTCTCCGTG
GTGGCGCGAAGAAGCGTAAGAAGAAGACCTACACCAAGCCGAAAAAGATC
AAGCACAAGAAGAAGAAGGTCAAGCTCGCCGTCTTGCAGTTTTACAAGGT
CGATGATTCTGGAAAGGTCCAGAGGCTGAGGAAGGAGTGTCCGAATGCTG
AGTGTGGAGCCGGCACCTTCATGGCTAACCACTTTGACAGGCACTACTGC
GGCAAGTGTGGACTCACCTATGTTTACCAGAAGGCTGGCGGTGATTGATC
GAGATTAGGTGGTTGTTTTGCTATTTTTAATTAGTATTAATTACTATGGT
TTTTGTGGTTCAAAAATTATGACTCTTTCGTAATTTTGTTTGACTATATA
CTTGTTTGCTTGAGCGTTTTAATTAAATGGTTATCTGTTTTAAATTTTAA
AAAA
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