EY756771

Overview
NameEY756771
Unique NameEY756771
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RS9_BIFA0 (30S ribosomal protein S9 OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=rpsI PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.775e-25
Identity = 66/120 (55.00%), Postives = 82/120 (68.33%), Query Frame = 1
Query:  262 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQD-HRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            +GTGRRK A+ARV L  GTG++ IN R  +EY     L  + +  P+V L  E  +D  V   GGG +GQA AI LGVARAL  + +D +R+ LKK G LTRD+RVVERKKAGLHKAR+A
Sbjct:   39 YGTGRRKEAVARVRLVPGTGEWKINGRTLEEYFPSKLLQRE-VNSPIVLLKLEGKFDAIVLVDGGGTTGQAGAIRLGVARALNAIDRDANRAALKKAGFLTRDARVVERKKAGLHKARRA 157          
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RS9_MYCA1 (30S ribosomal protein S9 OS=Mycobacterium avium (strain 104) GN=rpsI PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.146e-24
Identity = 64/116 (55.17%), Postives = 75/116 (64.66%), Query Frame = 1
Query:  271 GRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            GRRK A+ RV L  GTGKF +N R  + Y   N +  Q IK PLVT+    S+D++   HGGG SGQA A+ LG+ARAL+  S D R  LKK G LTRD R  ERKK GL KARKA
Sbjct:   46 GRRKEAVVRVRLVPGTGKFNLNGRTLEGYFP-NKVHQQLIKAPLVTVDRVDSFDIYAHLHGGGPSGQAGALRLGIARALILASPDDRPALKKAGFLTRDPRATERKKYGLKKARKA 160          
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RS9_BACA2 (30S ribosomal protein S9 OS=Bacillus amyloliquefaciens (strain FZB42) GN=rpsI PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.146e-24
Identity = 60/119 (50.42%), Postives = 81/119 (68.07%), Query Frame = 1
Query:  262 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            +GTGRRK ++ARV L  G G+ ++N R+  E++  +P  ++ IK PL       +YDV V  HGGGLSGQA AI  G+ARALL    ++R+ LK+ GLLTRD+R+ ERKK GL  AR+A
Sbjct:    7 YGTGRRKSSVARVRLVPGEGRIVVNNREISEHIP-SPALIEDIKQPLTLTETAGTYDVLVNVHGGGLSGQAGAIRHGIARALLEADPEYRATLKRAGLLTRDARMKERKKYGLKGARRA 124          
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RS9_ANOFW (30S ribosomal protein S9 OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=rpsI PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.146e-24
Identity = 63/119 (52.94%), Postives = 80/119 (67.23%), Query Frame = 1
Query:  262 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            +GTGRRK ++ARV L  G G+ I+N RD ++Y+    L ++ +K PLV      SYDV V   GGG +GQA AI  G+ARALL V  ++R  LK+ GLLTRDSRV ERKK GL  AR+A
Sbjct:    7 YGTGRRKSSVARVRLVPGEGRIIVNGRDIRDYVPYESL-VEVVKQPLVLTETFGSYDVLVNVSGGGFTGQAGAIRHGIARALLQVDPEYRQTLKRAGLLTRDSRVKERKKYGLKGARRA 124          
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RR9_PHATR (30S ribosomal protein S9, chloroplastic OS=Phaeodactylum tricornutum GN=rps9 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.146e-24
Identity = 63/118 (53.39%), Postives = 76/118 (64.41%), Query Frame = 1
Query:  265 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            G G+RK +IARV L  G GK IIN     +YLQ N  +L  +  PL  L  E  +D+     GGGL+GQAQAI LGVAR L  + +++RS LK  G LTRDSR+ ERKK GL KARKA
Sbjct:   15 GLGKRKQSIARVFLLPGDGKIIINKTSGNKYLQYNDNYLNTVWSPLEKLNLEKQFDIVALVQGGGLTGQAQAIQLGVARLLCTMDKENRSILKPFGFLTRDSRIKERKKYGLRKARKA 132          
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RS9_MYCTU (30S ribosomal protein S9 OS=Mycobacterium tuberculosis GN=rpsI PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.955e-24
Identity = 64/116 (55.17%), Postives = 76/116 (65.52%), Query Frame = 1
Query:  271 GRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            GRRK A+ RV L  GTGKF +N R  ++Y   N +  Q IK PLVT+    S+D+F    GGG SGQA A+ LG+ARAL+ VS + R  LKK G LTRD R  ERKK GL KARKA
Sbjct:   31 GRRKEAVVRVRLVPGTGKFDLNGRSLEDYFP-NKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRATERKKYGLKKARKA 145          
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RS9_MYCTA (30S ribosomal protein S9 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=rpsI PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.955e-24
Identity = 64/116 (55.17%), Postives = 76/116 (65.52%), Query Frame = 1
Query:  271 GRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            GRRK A+ RV L  GTGKF +N R  ++Y   N +  Q IK PLVT+    S+D+F    GGG SGQA A+ LG+ARAL+ VS + R  LKK G LTRD R  ERKK GL KARKA
Sbjct:   31 GRRKEAVVRVRLVPGTGKFDLNGRSLEDYFP-NKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRATERKKYGLKKARKA 145          
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RS9_MYCBT (30S ribosomal protein S9 OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=rpsI PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.955e-24
Identity = 64/116 (55.17%), Postives = 76/116 (65.52%), Query Frame = 1
Query:  271 GRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            GRRK A+ RV L  GTGKF +N R  ++Y   N +  Q IK PLVT+    S+D+F    GGG SGQA A+ LG+ARAL+ VS + R  LKK G LTRD R  ERKK GL KARKA
Sbjct:   31 GRRKEAVVRVRLVPGTGKFDLNGRSLEDYFP-NKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRATERKKYGLKKARKA 145          
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RS9_MYCBP (30S ribosomal protein S9 OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=rpsI PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.955e-24
Identity = 64/116 (55.17%), Postives = 76/116 (65.52%), Query Frame = 1
Query:  271 GRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            GRRK A+ RV L  GTGKF +N R  ++Y   N +  Q IK PLVT+    S+D+F    GGG SGQA A+ LG+ARAL+ VS + R  LKK G LTRD R  ERKK GL KARKA
Sbjct:   31 GRRKEAVVRVRLVPGTGKFDLNGRSLEDYFP-NKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRATERKKYGLKKARKA 145          
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RS9_MYCBO (30S ribosomal protein S9 OS=Mycobacterium bovis GN=rpsI PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.955e-24
Identity = 64/116 (55.17%), Postives = 76/116 (65.52%), Query Frame = 1
Query:  271 GRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            GRRK A+ RV L  GTGKF +N R  ++Y   N +  Q IK PLVT+    S+D+F    GGG SGQA A+ LG+ARAL+ VS + R  LKK G LTRD R  ERKK GL KARKA
Sbjct:   31 GRRKEAVVRVRLVPGTGKFDLNGRSLEDYFP-NKVHQQLIKAPLVTVDRVESFDIFAHLGGGGPSGQAGALRLGIARALILVSPEDRPALKKAGFLTRDPRATERKKYGLKKARKA 145          
The following BLAST results are available for this feature:
BLAST of EY756771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RS9_BIFA08.775e-2555.0030S ribosomal protein S9 OS=Bifidobacterium animal... [more]
RS9_MYCA11.146e-2455.1730S ribosomal protein S9 OS=Mycobacterium avium (s... [more]
RS9_BACA21.146e-2450.4230S ribosomal protein S9 OS=Bacillus amyloliquefac... [more]
RS9_ANOFW1.146e-2452.9430S ribosomal protein S9 OS=Anoxybacillus flavithe... [more]
RR9_PHATR1.146e-2453.3930S ribosomal protein S9, chloroplastic OS=Phaeoda... [more]
RS9_MYCTU1.955e-2455.1730S ribosomal protein S9 OS=Mycobacterium tubercul... [more]
RS9_MYCTA1.955e-2455.1730S ribosomal protein S9 OS=Mycobacterium tubercul... [more]
RS9_MYCBT1.955e-2455.1730S ribosomal protein S9 OS=Mycobacterium bovis (s... [more]
RS9_MYCBP1.955e-2455.1730S ribosomal protein S9 OS=Mycobacterium bovis (s... [more]
RS9_MYCBO1.955e-2455.1730S ribosomal protein S9 OS=Mycobacterium bovis GN... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-E02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756771 ID=EY756771; Name=EY756771; organism=Citrus sinensis; type=EST; length=879bp
CCACGCGTCCGGTCACCCGCAATATCTCCTCTCACATCTTCCCTCTCTTC
CCTTTCATTTTCCTCCCAAATTTCTCAGAAACCAGGCATCCCCTTTGTCT
CATTACACAGGTCCAAATCGATATCCATCTCTCCAAAAAATGATAAAACC
CCAAAACTGGTAGTATCGGCCACAGAAGCTGCGCCAGCTGAACTGGAAAC
AACTGACCTCAAGAAATACGTCAAGTCGAGGCTTCCCGGTGGCTTTGCGG
CTCAAACTATTTTTGGAACGGGCCGTCGGAAATGCGCCATTGCTCGTGTC
GTCCTCCAAGAAGGCACCGGCAAATTCATCATCAACTACCGCGATGCCAA
GGAATATCTTCAAGGCAATCCACTATGGCTACAGTATATAAAAGTCCCTT
TGGTAACTTTGGGTTATGAAACTAGCTATGATGTTTTTGTGAAAGCTCAT
GGTGGCGGCCTCTCTGGTCAAGCTCAAGCAATAACACTCGGCGTTGCTCG
TGCATTGTTGAANGTGAGCCAGGACCATAGATCCCCTCTGAAAAAGGAAG
GCCTTCTGACTAGAGATTCCAGAGTAGTAGAGAGGAAAAAAGCTGGACTC
CATAAAGCCCGCAAAGCCCACAGTATTCCAAACGGTGAGGCCAAAATTAC
AGTGTGATGGACTGTTACCCGNAGATCTATTTTCTGCTTGTATCTCCGAA
TAATATTATTATTATTAATTTTGGGTTAACATTTAAGGTTGGGAGTTTTG
GACTTCCAGTCCCGGGATCAAGGGATCAATAACAATTTTGGAAGAAGAGG
TAAAGTTGTCAAAATATTCCTTNNAAAAAAAANGGGCCAGAAATAGTNAA
AAAAAAAAGAAGGAGGGGGGCCGCCTAAA
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