EY756771

Overview
NameEY756771
Unique NameEY756771
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RS9_XANOM (30S ribosomal protein S9 OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=rpsI PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.687e-23
Identity = 58/119 (48.74%), Postives = 77/119 (64.71%), Query Frame = 1
Query:  262 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            +GTGRRK + ARV L++GTGK  +N R   E+  G       ++ PL       S+D+ V A GGG +GQA AI LG+ARAL+   +  +S L+K G +TRD+R VERKK GLHKAR+A
Sbjct:    7 YGTGRRKSSTARVFLRKGTGKITVNDRPLDEFF-GRETARMIVRQPLELTKNTESFDILVTASGGGTTGQAGAIRLGIARALVEYDETLKSELRKAGFMTRDAREVERKKVGLHKARRA 124          
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RS9_UREPA (30S ribosomal protein S9 OS=Ureaplasma parvum GN=rpsI PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.687e-23
Identity = 60/118 (50.85%), Postives = 79/118 (66.95%), Query Frame = 1
Query:  265 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            G GRRK +IARV L  G+GK ++N R  + Y   N L +Q +  PLV      +YDV+VK  GGG +GQA AI LG+ RAL+   +D ++ L+K GL+TRDSRV ERKK GL+ AR+A
Sbjct:   11 GLGRRKSSIARVKLVPGSGKVLVNDRQPENYFP-NKLVIQDMMQPLVLTKTAETYDVYVKVIGGGFNGQAGAIRLGITRALIQTREDLKTDLRKAGLVTRDSRVKERKKFGLYGARRA 127          
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RS9_UREP2 (30S ribosomal protein S9 OS=Ureaplasma parvum serovar 3 (strain ATCC 27815 / 27 / NCTC 11736) GN=rpsI PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.687e-23
Identity = 60/118 (50.85%), Postives = 79/118 (66.95%), Query Frame = 1
Query:  265 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            G GRRK +IARV L  G+GK ++N R  + Y   N L +Q +  PLV      +YDV+VK  GGG +GQA AI LG+ RAL+   +D ++ L+K GL+TRDSRV ERKK GL+ AR+A
Sbjct:   11 GLGRRKSSIARVKLVPGSGKVLVNDRQPENYFP-NKLVIQDMMQPLVLTKTAETYDVYVKVIGGGFNGQAGAIRLGITRALIQTREDLKTDLRKAGLVTRDSRVKERKKFGLYGARRA 127          
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RS9_RHOE4 (30S ribosomal protein S9 OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=rpsI PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.687e-23
Identity = 60/116 (51.72%), Postives = 76/116 (65.52%), Query Frame = 1
Query:  271 GRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            GRRK A+ RV +  GTG+F +N R  ++Y   N +  Q IK PLV +    S+D+    HGGG SGQA A+ L +ARAL+ V+ D R  LK+ G LTRD+R VERKK GL KARKA
Sbjct:   50 GRRKEAVVRVRMTPGTGQFKLNGRTLEDYFP-NKVHQQLIKAPLVLVERPESFDIIALLHGGGPSGQAGALRLAIARALIEVTPDDRPALKRAGFLTRDARAVERKKYGLKKARKA 164          
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RS9_MYCUA (30S ribosomal protein S9 OS=Mycobacterium ulcerans (strain Agy99) GN=rpsI PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.687e-23
Identity = 62/116 (53.45%), Postives = 74/116 (63.79%), Query Frame = 1
Query:  271 GRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            GRRK A+ RV L  G+GKF +N R  + Y   N +  Q IK PLVT+    SYD+F   HGGG SGQA A+ LG+ARAL+  + + R  LKK   LTRD R  ERKK GL KARKA
Sbjct:   32 GRRKEAVVRVRLVPGSGKFDLNGRSLEAYFP-NKVHQQLIKAPLVTVDRLESYDIFALLHGGGPSGQAGALRLGIARALIVANPEDRPALKKACFLTRDPRATERKKYGLKKARKA 146          
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RS9_HAHCH (30S ribosomal protein S9 OS=Hahella chejuensis (strain KCTC 2396) GN=rpsI PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.687e-23
Identity = 59/118 (50.00%), Postives = 75/118 (63.56%), Query Frame = 1
Query:  262 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARK 615
            +GTGRRK + ARV L+ G+GK  +N  D   Y  G       ++ PL  LG   ++DVFV   GGG SGQA AI  G+ RAL+   + +RSPL+K G +TRD+R VERKK GL KARK
Sbjct:    7 YGTGRRKTSTARVFLRPGSGKITVNQTDLDSYF-GRETARMVVRQPLELLGSIGNFDVFVTVKGGGPSGQAGAIRHGITRALIQYDEANRSPLRKAGYVTRDAREVERKKVGLRKARK 123          
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RR9_NEPOL (30S ribosomal protein S9, chloroplastic OS=Nephroselmis olivacea GN=rps9 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.687e-23
Identity = 61/117 (52.14%), Postives = 73/117 (62.39%), Query Frame = 1
Query:  268 TGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            TGRRKCA+A+V + EGTG+  IN R    YLQ NP +L   +  L        YD  VK  GGGL+GQA+AI LG+ARAL  +   HR  LK +G LTR+    ERKK GL KARKA
Sbjct:   12 TGRRKCAVAQVRIIEGTGQLTINQRPGVPYLQYNPAYLLAAQGALDVTELTNRYDTIVKTKGGGLTGQAEAIKLGLARALCSLHIKHRKALKPQGYLTRNPLRKERKKYGLKKARKA 128          
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RR9_CYACA (30S ribosomal protein S9, chloroplastic OS=Cyanidium caldarium GN=rps9 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.687e-23
Identity = 58/119 (48.74%), Postives = 73/119 (61.34%), Query Frame = 1
Query:  262 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            + TGRRKCA+A++    G GK ++N      Y Q N  + + I+ PL  L  E  YD  +   GGGLSGQA AI L +AR L  +S  +RS LK +  LTRDSR+ ERKK GL KARKA
Sbjct:    4 YSTGRRKCAVAQLRFFSGNGKIVVNGCSLDYYFQHNSAFTKIIRSPLKLLNLELLYDFIIVVKGGGLSGQAGAIRLAIARVLAGLSPSNRSSLKSKRYLTRDSRIKERKKYGLKKARKA 122          
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RS9_UREU1 (30S ribosomal protein S9 OS=Ureaplasma urealyticum serovar 10 (strain ATCC 33699 / Western) GN=rpsI PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.815e-23
Identity = 61/118 (51.69%), Postives = 78/118 (66.10%), Query Frame = 1
Query:  265 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            G GRRK +IARV L  G+GK  IN R  + Y   N L +Q +  PLV      +YDV+VK  GGG +GQA AI LG+ RAL+   +D ++ L+K GL+TRDSRV ERKK GL+ AR+A
Sbjct:   11 GLGRRKSSIARVKLVPGSGKVFINDRQPENYFP-NKLVIQDMMQPLVLTKTAETYDVYVKVIGGGFNGQAGAIRLGITRALIQTREDLKTDLRKAGLVTRDSRVKERKKFGLYGARRA 127          
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RS9_THET8 (30S ribosomal protein S9 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=rpsI PE=1 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 4.815e-23
Identity = 59/119 (49.58%), Postives = 78/119 (65.55%), Query Frame = 1
Query:  262 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            +GTGRRK A+ARV L+ G GK  +N +D  EY QG    +  ++ PL  +     +D ++   GGG SGQ  AI LG+ARAL+  + D+R+ LK  G LTRD+RVVERKK G HKAR+A
Sbjct:    5 YGTGRRKEAVARVFLRPGNGKVTVNGQDFNEYFQGLVRAVAALE-PLRAVDALGHFDAYITVRGGGKSGQIDAIKLGIARALVQYNPDYRAKLKPLGFLTRDARVVERKKYGKHKARRA 122          
The following BLAST results are available for this feature:
BLAST of EY756771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RS9_XANOM3.687e-2348.7430S ribosomal protein S9 OS=Xanthomonas oryzae pv.... [more]
RS9_UREPA3.687e-2350.8530S ribosomal protein S9 OS=Ureaplasma parvum GN=r... [more]
RS9_UREP23.687e-2350.8530S ribosomal protein S9 OS=Ureaplasma parvum sero... [more]
RS9_RHOE43.687e-2351.7230S ribosomal protein S9 OS=Rhodococcus erythropol... [more]
RS9_MYCUA3.687e-2353.4530S ribosomal protein S9 OS=Mycobacterium ulcerans... [more]
RS9_HAHCH3.687e-2350.0030S ribosomal protein S9 OS=Hahella chejuensis (st... [more]
RR9_NEPOL3.687e-2352.1430S ribosomal protein S9, chloroplastic OS=Nephros... [more]
RR9_CYACA3.687e-2348.7430S ribosomal protein S9, chloroplastic OS=Cyanidi... [more]
RS9_UREU14.815e-2351.6930S ribosomal protein S9 OS=Ureaplasma urealyticum... [more]
RS9_THET84.815e-2349.5830S ribosomal protein S9 OS=Thermus thermophilus (... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-E02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756771 ID=EY756771; Name=EY756771; organism=Citrus sinensis; type=EST; length=879bp
CCACGCGTCCGGTCACCCGCAATATCTCCTCTCACATCTTCCCTCTCTTC
CCTTTCATTTTCCTCCCAAATTTCTCAGAAACCAGGCATCCCCTTTGTCT
CATTACACAGGTCCAAATCGATATCCATCTCTCCAAAAAATGATAAAACC
CCAAAACTGGTAGTATCGGCCACAGAAGCTGCGCCAGCTGAACTGGAAAC
AACTGACCTCAAGAAATACGTCAAGTCGAGGCTTCCCGGTGGCTTTGCGG
CTCAAACTATTTTTGGAACGGGCCGTCGGAAATGCGCCATTGCTCGTGTC
GTCCTCCAAGAAGGCACCGGCAAATTCATCATCAACTACCGCGATGCCAA
GGAATATCTTCAAGGCAATCCACTATGGCTACAGTATATAAAAGTCCCTT
TGGTAACTTTGGGTTATGAAACTAGCTATGATGTTTTTGTGAAAGCTCAT
GGTGGCGGCCTCTCTGGTCAAGCTCAAGCAATAACACTCGGCGTTGCTCG
TGCATTGTTGAANGTGAGCCAGGACCATAGATCCCCTCTGAAAAAGGAAG
GCCTTCTGACTAGAGATTCCAGAGTAGTAGAGAGGAAAAAAGCTGGACTC
CATAAAGCCCGCAAAGCCCACAGTATTCCAAACGGTGAGGCCAAAATTAC
AGTGTGATGGACTGTTACCCGNAGATCTATTTTCTGCTTGTATCTCCGAA
TAATATTATTATTATTAATTTTGGGTTAACATTTAAGGTTGGGAGTTTTG
GACTTCCAGTCCCGGGATCAAGGGATCAATAACAATTTTGGAAGAAGAGG
TAAAGTTGTCAAAATATTCCTTNNAAAAAAAANGGGCCAGAAATAGTNAA
AAAAAAAAGAAGGAGGGGGGCCGCCTAAA
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