EY756771

Overview
NameEY756771
Unique NameEY756771
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY756771_ssr704 microsatellite EY756771_ssr704:704..715. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RS9_MYCHJ (30S ribosomal protein S9 OS=Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) GN=rpsI PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.728e-26
Identity = 65/119 (54.62%), Postives = 84/119 (70.59%), Query Frame = 1 
Query:  262 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            +GTGRRK ++ARV L+ G G+F IN R AKEYL+ + L    ++ PL      + +++ V AHGGG+SGQA AI LG+ARALL VS D+R  LK  G+LTRD+R  ERKK GL KAR+A
Sbjct:    9 YGTGRRKSSVARVTLKHGNGQFKINNRVAKEYLKSDILIKDALQ-PLSITNTVSEFNIRVNAHGGGISGQAGAIRLGIARALLKVSADYRPGLKVAGMLTRDARAKERKKFGLRKARRA 126
[Close]
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RS9_MYCH7 (30S ribosomal protein S9 OS=Mycoplasma hyopneumoniae (strain 7448) GN=rpsI PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.728e-26
Identity = 65/119 (54.62%), Postives = 84/119 (70.59%), Query Frame = 1 
Query:  262 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            +GTGRRK ++ARV L+ G G+F IN R AKEYL+ + L    ++ PL      + +++ V AHGGG+SGQA AI LG+ARALL VS D+R  LK  G+LTRD+R  ERKK GL KAR+A
Sbjct:    9 YGTGRRKSSVARVTLKHGNGQFKINNRVAKEYLKSDILIKDALQ-PLSITNTVSEFNIRVNAHGGGISGQAGAIRLGIARALLKVSADYRPGLKVAGMLTRDARAKERKKFGLRKARRA 126
[Close]
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RS9_MYCH2 (30S ribosomal protein S9 OS=Mycoplasma hyopneumoniae (strain 232) GN=rpsI PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.728e-26
Identity = 65/119 (54.62%), Postives = 84/119 (70.59%), Query Frame = 1 
Query:  262 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            +GTGRRK ++ARV L+ G G+F IN R AKEYL+ + L    ++ PL      + +++ V AHGGG+SGQA AI LG+ARALL VS D+R  LK  G+LTRD+R  ERKK GL KAR+A
Sbjct:    9 YGTGRRKSSVARVTLKHGNGQFKINNRVAKEYLKSDILIKDALQ-PLSITNTVSEFNIRVNAHGGGISGQAGAIRLGIARALLKVSADYRPGLKVAGMLTRDARAKERKKFGLRKARRA 126
[Close]
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RR9_OLTVI (30S ribosomal protein S9, chloroplastic OS=Oltmannsiellopsis viridis GN=rps9 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.728e-26
Identity = 64/118 (54.24%), Postives = 76/118 (64.41%), Query Frame = 1 
Query:  265 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            GTGRRK A+A+V L  G GK IIN +   +YL  N   +  I+ P      +  +D  VK HGGGLS QA AI LGVARAL  ++  HR  LK  G LTRD+R+VERKKAGL KARKA
Sbjct:    2 GTGRRKRAVAQVKLVAGEGKLIINGKPGFDYLHNNATAILSIQGPFQLFKLQKKFDTIVKVHGGGLSAQADAIKLGVARALCEINTSHRPVLKSNGYLTRDARIVERKKAGLKKARKA 119
[Close]
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RS9_STRS7 (30S ribosomal protein S9 OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=rpsI PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.653e-26
Identity = 67/118 (56.78%), Postives = 78/118 (66.10%), Query Frame = 1 
Query:  265 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            GTGRRK A+ARV L  GTGK  +N +D +EY+    L L  I  P      E SYDVFV   GGG +GQ+ AI  G+ARALL V  D R  LK+ GLLTRD+R+VERKK GL KARKA
Sbjct:    8 GTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRL-IINQPFAVTSTEGSYDVFVNVVGGGYAGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKA 124
[Close]
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RS9_STRS2 (30S ribosomal protein S9 OS=Streptococcus suis (strain 98HAH33) GN=rpsI PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.653e-26
Identity = 66/118 (55.93%), Postives = 78/118 (66.10%), Query Frame = 1 
Query:  265 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            GTGRRK A+ARV L  GTGK  +N +D +EY+    L L  I  P      + SYDVFV  +GGG  GQ+ AI  G+ARALL V  D R  LK+ GLLTRD+R+VERKK GL KARKA
Sbjct:    8 GTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRL-VINQPFAVTSTQGSYDVFVNVNGGGYGGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKA 124
[Close]
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RS9_STRMU (30S ribosomal protein S9 OS=Streptococcus mutans GN=rpsI PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.653e-26
Identity = 67/118 (56.78%), Postives = 78/118 (66.10%), Query Frame = 1 
Query:  265 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            GTGRRK A+ARV L  GTGK  +N +D +EY+    L L  I  P      E SYDVFV   GGG +GQ+ AI  G+ARALL V  D R  LK+ GLLTRD+R+VERKK GL KARKA
Sbjct:    8 GTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRL-VINQPFAVTSTEGSYDVFVNVVGGGYAGQSGAIRHGIARALLEVDPDFRDALKRAGLLTRDARMVERKKPGLKKARKA 124
[Close]
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RS9_STREM (30S ribosomal protein S9 OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=rpsI PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.653e-26
Identity = 67/118 (56.78%), Postives = 78/118 (66.10%), Query Frame = 1 
Query:  265 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            GTGRRK A+ARV L  GTGK  +N +D +EY+    L L  I  P      E SYDVFV   GGG +GQ+ AI  G+ARALL V  D R  LK+ GLLTRD+R+VERKK GL KARKA
Sbjct:    8 GTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRL-VINQPFAVTSTEGSYDVFVNVVGGGYAGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKA 124
[Close]
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RS9_STRE4 (30S ribosomal protein S9 OS=Streptococcus equi subsp. equi (strain 4047) GN=rpsI PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.653e-26
Identity = 67/118 (56.78%), Postives = 78/118 (66.10%), Query Frame = 1 
Query:  265 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            GTGRRK A+ARV L  GTGK  +N +D +EY+    L L  I  P      E SYDVFV   GGG +GQ+ AI  G+ARALL V  D R  LK+ GLLTRD+R+VERKK GL KARKA
Sbjct:    8 GTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRL-VINQPFAVTSTEGSYDVFVNVVGGGYAGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKA 124
[Close]
BLAST of EY756771 vs. ExPASy Swiss-Prot
Match: RS9_STRPZ (30S ribosomal protein S9 OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=rpsI PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.077e-26
Identity = 67/118 (56.78%), Postives = 77/118 (65.25%), Query Frame = 1 
Query:  265 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLXVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKA 618
            GTGRRK A+ARV L  GTGK  +N +D +EY+    L L  I  P      E SYDVFV   GGG  GQ+ AI  G+ARALL V  D R  LK+ GLLTRD+R+VERKK GL KARKA
Sbjct:    8 GTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRL-IINQPFAVTSTEGSYDVFVNVVGGGYGGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKA 124
The following BLAST results are available for this feature:
BLAST of EY756771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RS9_MYCHJ2.728e-2654.6230S ribosomal protein S9 OS=Mycoplasma hyopneumoni... [more]
RS9_MYCH72.728e-2654.6230S ribosomal protein S9 OS=Mycoplasma hyopneumoni... [more]
RS9_MYCH22.728e-2654.6230S ribosomal protein S9 OS=Mycoplasma hyopneumoni... [more]
RR9_OLTVI2.728e-2654.2430S ribosomal protein S9, chloroplastic OS=Oltmann... [more]
RS9_STRS74.653e-2656.7830S ribosomal protein S9 OS=Streptococcus equi sub... [more]
RS9_STRS24.653e-2655.9330S ribosomal protein S9 OS=Streptococcus suis (st... [more]
RS9_STRMU4.653e-2656.7830S ribosomal protein S9 OS=Streptococcus mutans G... [more]
RS9_STREM4.653e-2656.7830S ribosomal protein S9 OS=Streptococcus equi sub... [more]
RS9_STRE44.653e-2656.7830S ribosomal protein S9 OS=Streptococcus equi sub... [more]
RS9_STRPZ6.077e-2656.7830S ribosomal protein S9 OS=Streptococcus pyogenes... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-E02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756771 ID=EY756771; Name=EY756771; organism=Citrus sinensis; type=EST; length=879bp
CCACGCGTCCGGTCACCCGCAATATCTCCTCTCACATCTTCCCTCTCTTC
CCTTTCATTTTCCTCCCAAATTTCTCAGAAACCAGGCATCCCCTTTGTCT
CATTACACAGGTCCAAATCGATATCCATCTCTCCAAAAAATGATAAAACC
CCAAAACTGGTAGTATCGGCCACAGAAGCTGCGCCAGCTGAACTGGAAAC
AACTGACCTCAAGAAATACGTCAAGTCGAGGCTTCCCGGTGGCTTTGCGG
CTCAAACTATTTTTGGAACGGGCCGTCGGAAATGCGCCATTGCTCGTGTC
GTCCTCCAAGAAGGCACCGGCAAATTCATCATCAACTACCGCGATGCCAA
GGAATATCTTCAAGGCAATCCACTATGGCTACAGTATATAAAAGTCCCTT
TGGTAACTTTGGGTTATGAAACTAGCTATGATGTTTTTGTGAAAGCTCAT
GGTGGCGGCCTCTCTGGTCAAGCTCAAGCAATAACACTCGGCGTTGCTCG
TGCATTGTTGAANGTGAGCCAGGACCATAGATCCCCTCTGAAAAAGGAAG
GCCTTCTGACTAGAGATTCCAGAGTAGTAGAGAGGAAAAAAGCTGGACTC
CATAAAGCCCGCAAAGCCCACAGTATTCCAAACGGTGAGGCCAAAATTAC
AGTGTGATGGACTGTTACCCGNAGATCTATTTTCTGCTTGTATCTCCGAA
TAATATTATTATTATTAATTTTGGGTTAACATTTAAGGTTGGGAGTTTTG
GACTTCCAGTCCCGGGATCAAGGGATCAATAACAATTTTGGAAGAAGAGG
TAAAGTTGTCAAAATATTCCTTNNAAAAAAAANGGGCCAGAAATAGTNAA
AAAAAAAAGAAGGAGGGGGGCCGCCTAAA
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