EY756750

Overview
NameEY756750
Unique NameEY756750
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_THET8 (Nucleoside diphosphate kinase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=ndk PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.973e-38
Identity = 76/131 (58.02%), Postives = 97/131 (74.05%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            ME+TF+MIKPDGV+RGLVGEI+ RFE+KGF +  LKLM + +  AE+HY +   KPFF  L+ +ITSGPVVAM+ EG GVV   R ++GAT+P  + PGTIRGD A     N+IHGS + E AQ++IAL F
Sbjct:    1 MERTFVMIKPDGVRRGLVGEILARFERKGFRIAALKLMQISQELAERHYAEHREKPFFPGLVRFITSGPVVAMVLEGPGVVAEVRKMMGATHPKDALPGTIRGDFATTIDENVIHGSATLEDAQREIALFF 131          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_THET2 (Nucleoside diphosphate kinase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=ndk PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.973e-38
Identity = 76/131 (58.02%), Postives = 97/131 (74.05%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            ME+TF+MIKPDGV+RGLVGEI+ RFE+KGF +  LKLM + +  AE+HY +   KPFF  L+ +ITSGPVVAM+ EG GVV   R ++GAT+P  + PGTIRGD A     N+IHGS + E AQ++IAL F
Sbjct:    1 MERTFVMIKPDGVRRGLVGEILARFERKGFRIAALKLMRISQELAERHYAEHREKPFFPGLVRFITSGPVVAMVLEGPGVVAEVRKMMGATHPKDALPGTIRGDFATTIDENVIHGSATLEDAQREIALFF 131          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_DEIDV (Nucleoside diphosphate kinase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=ndk PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.577e-38
Identity = 75/136 (55.15%), Postives = 98/136 (72.06%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRFPDGPI 474
            ME+TF MIKPDGV+RGL  EI+ R  +KG+ + GLK M + R  AE HY +   +PFFG L+++IT GPVVA+  EGE  +   R ++GATNPA +APGTIR D A  TG N+ HGSDSAESAQ+++AL F +G +
Sbjct:    1 MERTFAMIKPDGVRRGLTPEILARIARKGYRVVGLKQMVIARETAENHYGEHRERPFFGELVDFITGGPVVAIALEGENAIAGWRAMMGATNPANAAPGTIRADFATTTGENVTHGSDSAESAQRELALFFQEGEL 136          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_METBU (Nucleoside diphosphate kinase OS=Methanococcoides burtonii (strain DSM 6242) GN=ndk PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.365e-38
Identity = 73/149 (48.99%), Postives = 105/149 (70.47%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRFPDGPIN*HSSL-HPWIYE 510
            ME+T++M+KPDGVQR LVGEI+ R EKKG  +  L++  +    A++HY++ S +PFFGSL+ ++TSGP V+M+ EG   +K  R I GATNP  + PGTIRGDLA+  GRN++H SD+ ESA+++I L F +  I+ +      W+YE
Sbjct:    1 MERTYVMVKPDGVQRCLVGEIVSRIEKKGLKIAALRMNVMTEAAAKEHYKEHSERPFFGSLVSFVTSGPSVSMVIEGNNAIKIMRAINGATNPVDALPGTIRGDLAVDMGRNVVHASDAPESAEREIGLHFEESEISGYPRADDEWLYE 149          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDKM_HUMAN (Nucleoside diphosphate kinase, mitochondrial OS=Homo sapiens GN=NME4 PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.395e-38
Identity = 74/149 (49.66%), Postives = 104/149 (69.80%), Query Frame = 1
Query:   70 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRFPDGPI------N*HSSLHP 498
            E+T + +KPDGVQR LVG++I RFE++GF+L G+K++        +HY+DL  KPF+ +LI Y++SGPVVAM+WEG  VV+  R +IG T+ A++APGTIRGD ++   RN+IH SDS E AQ++I L F    +        HSS+HP
Sbjct:   38 ERTLVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPALIRYMSSGPVVAMVWEGYNVVRASRAMIGHTDSAEAAPGTIRGDFSVHISRNVIHASDSVEGAQREIQLWFQSSELVSWADGGQHSSIHP 186          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_METAC (Nucleoside diphosphate kinase OS=Methanosarcina acetivorans GN=ndk PE=3 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 5.741e-38
Identity = 73/140 (52.14%), Postives = 102/140 (72.86%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRFPDGPIN*HS 486
            MEQT++M+KPDGVQRGLVGE+I R EK+G  +  L++  +    A++HY + +++PFF SLIE+ITSGP V+M+  G+  +K  R I GATNP  +APGTIRGD A+  GRN++H SDS E+A ++IA+ F D  I  +S
Sbjct:    1 MEQTYVMVKPDGVQRGLVGEVISRIEKRGLKILALRMNVIAEATAKEHYGEHAARPFFPSLIEFITSGPSVSMVVAGKDAIKVMRAINGATNPVDAAPGTIRGDFALDVGRNVVHASDSPEAAAREIAIHFKDSEIGKYS 140          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_HALMA (Nucleoside diphosphate kinase OS=Haloarcula marismortui GN=ndk PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.741e-38
Identity = 73/154 (47.40%), Postives = 106/154 (68.83%), Query Frame = 1
Query:   58 LKEMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESA--QKDIALRFPDGPIN*HSSL-HPWIYE 510
            + E E+TF+M+KPDGVQRGL+G+I+ RFE +G  + G K M +D+  AE+HY +   KPFF  L+++ITSGPV AM+WEG+   +  RT++G T+PA+SAPGTIRGD  +  GRN+IHGSD  +    +++I L F +  +     +   W+YE
Sbjct:    1 MSEHERTFVMVKPDGVQRGLIGDIVSRFEDRGLKMVGGKFMQIDQELAEEHYGEHEDKPFFDGLVDFITSGPVFAMVWEGQDATRQVRTMMGETDPAESAPGTIRGDYGLDLGRNVIHGSDHEDEGANEREIELFFDEAELVDWDQIDSSWLYE 154          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_METBF (Nucleoside diphosphate kinase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=ndk PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.498e-38
Identity = 71/142 (50.00%), Postives = 102/142 (71.83%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRFPDGPIN*HSSL 492
            MEQT++M+KPDGVQRGLVGEII R EK+G  +  L++  +    A++HY + ++KPFF  L+ +ITSGP V+M+ EG+  ++  R I GATNP  +APGT+RGD A+  GRN++H SDS E+A ++IA+ F D  I  +S +
Sbjct:    1 MEQTYVMVKPDGVQRGLVGEIISRIEKRGLKIVALRMNVISEATAKEHYSEHAAKPFFPGLVGFITSGPSVSMVVEGKDAIRVMRAINGATNPVDAAPGTVRGDFALDVGRNVVHASDSPEAAAREIAIHFKDSEIGNYSRI 142          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_FRASC (Nucleoside diphosphate kinase OS=Frankia sp. (strain CcI3) GN=ndk PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.498e-38
Identity = 71/132 (53.79%), Postives = 104/132 (78.79%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRFP 462
            +E+T I++KPDGV RGLVGE++ R E+KG +L  L+L T++R  AE HY + +SKPFFG L+++ITSGP+VA++ EG   V+  R +IGAT+P ++APG++RGD A+  G+N++HGSDS ESA+++I L FP
Sbjct:    3 VERTLILVKPDGVSRGLVGEVVGRLERKGLTLVALELRTLERSVAETHYGEHASKPFFGELVDFITSGPLVALVAEGPRAVEASRGLIGATDPVKAAPGSLRGDYALEIGQNLVHGSDSPESAKREIDLFFP 134          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_METMA (Nucleoside diphosphate kinase OS=Methanosarcina mazei GN=ndk PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 9.792e-38
Identity = 72/136 (52.94%), Postives = 100/136 (73.53%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRFPDGPI 474
            MEQT++M+KPDGVQRGLVGE+I R EK+G  +  L++  +    A++HY + +++PFF SLIE+ITSGP V+M+  G+  +K  R I GATNP  +APGTIRGD A+  GRN++H SDS E+A ++IA+ F D  I
Sbjct:    1 MEQTYVMVKPDGVQRGLVGEVISRIEKRGLKIVALRMNVIAEATAKEHYGEHAARPFFPSLIEFITSGPSVSMVVAGKDAIKVMRAINGATNPVDAAPGTIRGDFALDVGRNVVHASDSPEAAAREIAIHFKDSEI 136          
The following BLAST results are available for this feature:
BLAST of EY756750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_THET81.973e-3858.02Nucleoside diphosphate kinase OS=Thermus thermophi... [more]
NDK_THET21.973e-3858.02Nucleoside diphosphate kinase OS=Thermus thermophi... [more]
NDK_DEIDV2.577e-3855.15Nucleoside diphosphate kinase OS=Deinococcus deser... [more]
NDK_METBU3.365e-3848.99Nucleoside diphosphate kinase OS=Methanococcoides ... [more]
NDKM_HUMAN4.395e-3849.66Nucleoside diphosphate kinase, mitochondrial OS=Ho... [more]
NDK_METAC5.741e-3852.14Nucleoside diphosphate kinase OS=Methanosarcina ac... [more]
NDK_HALMA5.741e-3847.40Nucleoside diphosphate kinase OS=Haloarcula marism... [more]
NDK_METBF7.498e-3850.00Nucleoside diphosphate kinase OS=Methanosarcina ba... [more]
NDK_FRASC7.498e-3853.79Nucleoside diphosphate kinase OS=Frankia sp. (stra... [more]
NDK_METMA9.792e-3852.94Nucleoside diphosphate kinase OS=Methanosarcina ma... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-C04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756750 ID=EY756750; Name=EY756750; organism=Citrus sinensis; type=EST; length=672bp
TGCTCGACCCACGCGTCCGATTTCACTCAATTCTCAAAAAAGTTGGTTTC
TCTGAATCTCAAAGAAATGGAACAAACTTTCATCATGATCAAGCCCGATG
GGGTCCAAAGAGGCCTTGTTGGTGAAATCATCATCAGATTTGAGAAGAAG
GGTTTCTCTTTGAAGGGTTTGAAGCTTATGACTGTGGACCGCCCTTTTGC
TGAGAAGCACTATGAGGATTTGTCATCGAAGCCTTTCTTTGGCTCTCTGA
TTGAGTACATTACCTCTGGGCCTGTTGTTGCTATGATTTGGGAGGGTGAA
GGTGTTGTTAAGACTGGCCGCACTATTATTGGAGCCACCAACCCTGCGCA
GTCTGCTCCTGGAACCATCCGTGGTGATTTGGCTATCGCGACGGGCAGGA
ATATTATCCATGGAAGTGACTCAGCTGAGAGTGCCCAGAAAGATATCGCC
TTGAGGTTCCCTGATGGCCCTATTAACTGACACAGCAGCCTTCACCCTTG
GATCTATGAGTAAACTAATGTCTGGATGAGGAGCCTAATTGTTCCTGCAG
TTAGACTTATCCCTATCCCTATCGCTATTTCCTTATTTATGGATACTCCT
TGTCGGTGAACTGGTATGAAGGATTGAGTTAAATAGAGACAATCCTGGTT
ATGTTGGCTGCTTTTNNNNNNN
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