EY756750

Overview
NameEY756750
Unique NameEY756750
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_SHESH (Nucleoside diphosphate kinase OS=Shewanella sediminis (strain HAW-EB3) GN=ndk PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.954e-27
Identity = 58/131 (44.27%), Postives = 85/131 (64.89%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            +E+TF +IKPD V +  +G I  RFE  G  +   K++ + +  AE  Y + S +PFFG+L+E++TSGP+   + EGE  V   R I+GATNPA++A GTIR D A +   N +HGSD+  SA+++IA  F
Sbjct:    3 IERTFSIIKPDAVAKNHIGAIYNRFETAGLKIIASKMLHLSKEQAEGFYAEHSERPFFGALVEFMTSGPICVQVLEGENAVLANREIMGATNPAEAARGTIRSDFADSIDENAVHGSDAVASAEREIAYFF 133          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_HAES1 (Nucleoside diphosphate kinase OS=Haemophilus somnus (strain 129Pt) GN=ndk PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.954e-27
Identity = 60/136 (44.12%), Postives = 87/136 (63.97%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRFPDGPI 474
            +EQT  +IKPD V+R L+G II R E KGF +  +K++ +++  AE  Y + S K FF  LI Y+TS P+V ++ + E  VK  RT +G TNP  +  GT+R + AI   +N +HGSDS E+AQ++IA  F +  I
Sbjct:    3 LEQTLAIIKPDAVERNLIGNIISRLEDKGFQIIAMKMLHLNQEQAEGFYTEHSDKAFFAELIRYMTSAPIVVLVLQKENAVKDYRTFMGTTNPEIAENGTLRYEFAINQTQNSVHGSDSLENAQREIAYFFAEAEI 138          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_CAMHC (Nucleoside diphosphate kinase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=ndk PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.954e-27
Identity = 58/131 (44.27%), Postives = 85/131 (64.89%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            M+QT  +IKPD V++G++G+II RFE  G  +   K + + +  A + Y     + FF  L++Y+TSGPVV M+ EGE  V   R ++GAT+P ++APGTIR D A +   N +HGSDS E+A+ +IA  F
Sbjct:    1 MQQTLSIIKPDAVEKGVIGKIIDRFESAGLRIAAAKKIKLSKCDASQFYAIHKERSFFNDLVDYMTSGPVVVMVLEGENAVAKNRELMGATDPKKAAPGTIRADFAESIDANAVHGSDSEENAKNEIAFFF 131          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_SULDN (Nucleoside diphosphate kinase OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=ndk PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.777e-27
Identity = 60/137 (43.80%), Postives = 85/137 (62.04%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRFPDGPIN 477
            ME+T  +IKPD V +G+VG+I+ RFE  G  +   + M + R  AE  Y   S +PFFG L++++ SGPVV  + EGEG +   R ++GATNP ++  GTIR D A     N +HGSDS E+A  +IA  F +  I+
Sbjct:    1 MERTLSIIKPDAVAKGVVGKILDRFESNGLKIAATRKMQLSRADAEAFYAVHSERPFFGDLVDFMISGPVVVSVLEGEGALIKNRNLMGATNPKEAEAGTIRADFAENIDANAVHGSDSLENAAVEIAFFFSEREIS 137          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_SHELP (Nucleoside diphosphate kinase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=ndk PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.777e-27
Identity = 57/131 (43.51%), Postives = 86/131 (65.65%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            +E+TF +IKPD V +  +G I  RFE  G  +   K++ + +  AE  Y + S +PFFG+L+E++TSGP++  + EGE  V   R I+GATNPA++A GT+R D A +   N +HGSD+  SA+++IA  F
Sbjct:    3 IERTFSIIKPDAVAKNHIGAIYNRFETAGLKIIASKMVHLSKEQAEGFYAEHSERPFFGALVEFMTSGPIMVQVLEGENAVLANREIMGATNPAEAARGTLRADFADSIDENAVHGSDAVASAEREIAYFF 133          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_METEP (Nucleoside diphosphate kinase OS=Methylobacterium extorquens (strain PA1) GN=ndk PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.777e-27
Identity = 60/135 (44.44%), Postives = 85/135 (62.96%), Query Frame = 1
Query:   70 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRFPDGPI 474
            E+TF ++KPD  +R + G +    E  G  + G + + + R  AEK YE    +PFFG L+E++TSGPVV  + EGE  V   R ++GATNPAQ+A GTIR   A + G N +HGSDSA++A+ +IA  F +  I
Sbjct:    4 ERTFSILKPDATRRNITGAVNAVIEAAGLRIVGQRRIRMTREQAEKFYEVHKERPFFGELVEFMTSGPVVVQVLEGENAVAKYREVMGATNPAQAADGTIRKQFAESVGENTVHGSDSADNARLEIAQFFNEADI 138          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_AZOVD (Nucleoside diphosphate kinase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=ndk PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.777e-27
Identity = 56/131 (42.75%), Postives = 84/131 (64.12%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            +E+T  +IKPD V + ++GEI+ RFEK G S+   K++ +    A   Y +   +PFF  L+ ++TSGPVV  + EGEG +   R ++GAT+P ++ PGTIR D A++   N +HGSDS  SA ++IA  F
Sbjct:    3 VERTLSIIKPDAVAKNVIGEILTRFEKAGLSVVAAKMVQLSEREAGGFYAEHKERPFFKDLVSFMTSGPVVVQVLEGEGAIAKNRELMGATDPKKAEPGTIRADFAVSIDENAVHGSDSEASAAREIAYFF 133          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_SHESW (Nucleoside diphosphate kinase OS=Shewanella sp. (strain W3-18-1) GN=ndk PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.016e-26
Identity = 59/131 (45.04%), Postives = 84/131 (64.12%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            +E+TF +IKPD V +  +G I  RFE  G  +   K++ + +  AE  Y + S + FFG+L+ ++TSGP++  + EGE  V   R I+GATNPAQ+APGTIR D A +   N  HGSD+ ESA ++IA  F
Sbjct:    3 IERTFSIIKPDAVAKNHIGAIYNRFETAGLKIVAAKMLHLTKEQAEGFYAEHSERGFFGALVAFMTSGPIMVQVLEGENAVLAHREILGATNPAQAAPGTIRADFAESIDENAAHGSDAVESAAREIAYFF 133          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_SHEPC (Nucleoside diphosphate kinase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=ndk PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.016e-26
Identity = 59/131 (45.04%), Postives = 84/131 (64.12%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            +E+TF +IKPD V +  +G I  RFE  G  +   K++ + +  AE  Y + S + FFG+L+ ++TSGP++  + EGE  V   R I+GATNPAQ+APGTIR D A +   N  HGSD+ ESA ++IA  F
Sbjct:    3 IERTFSIIKPDAVAKNHIGAIYNRFETAGLKIVAAKMLHLTKEQAEGFYAEHSERGFFGALVAFMTSGPIMVQVLEGENAVLAHREILGATNPAQAAPGTIRADFAESIDENAAHGSDAVESAAREIAYFF 133          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_SHEAM (Nucleoside diphosphate kinase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=ndk PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.016e-26
Identity = 57/131 (43.51%), Postives = 85/131 (64.89%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            +E+TF +IKPD V +  +G I  RFE  G  +   K++ + +  AE  Y + S +PFFG+L+ ++TSGP++  + EGE  V   R I+GATNPAQ+A GT+R D A +   N +HGSD+  SA+++IA  F
Sbjct:    3 IERTFSIIKPDAVAKNHIGAIYNRFESAGLKIIAAKMVHLTKEQAEGFYAEHSERPFFGALVSFMTSGPIMVQVLEGENAVLANREIMGATNPAQAARGTLRADYAASIDENAVHGSDALASAEREIAYFF 133          
The following BLAST results are available for this feature:
BLAST of EY756750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_SHESH5.954e-2744.27Nucleoside diphosphate kinase OS=Shewanella sedimi... [more]
NDK_HAES15.954e-2744.12Nucleoside diphosphate kinase OS=Haemophilus somnu... [more]
NDK_CAMHC5.954e-2744.27Nucleoside diphosphate kinase OS=Campylobacter hom... [more]
NDK_SULDN7.777e-2743.80Nucleoside diphosphate kinase OS=Sulfurimonas deni... [more]
NDK_SHELP7.777e-2743.51Nucleoside diphosphate kinase OS=Shewanella loihic... [more]
NDK_METEP7.777e-2744.44Nucleoside diphosphate kinase OS=Methylobacterium ... [more]
NDK_AZOVD7.777e-2742.75Nucleoside diphosphate kinase OS=Azotobacter vinel... [more]
NDK_SHESW1.016e-2645.04Nucleoside diphosphate kinase OS=Shewanella sp. (s... [more]
NDK_SHEPC1.016e-2645.04Nucleoside diphosphate kinase OS=Shewanella putref... [more]
NDK_SHEAM1.016e-2643.51Nucleoside diphosphate kinase OS=Shewanella amazon... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-C04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756750 ID=EY756750; Name=EY756750; organism=Citrus sinensis; type=EST; length=672bp
TGCTCGACCCACGCGTCCGATTTCACTCAATTCTCAAAAAAGTTGGTTTC
TCTGAATCTCAAAGAAATGGAACAAACTTTCATCATGATCAAGCCCGATG
GGGTCCAAAGAGGCCTTGTTGGTGAAATCATCATCAGATTTGAGAAGAAG
GGTTTCTCTTTGAAGGGTTTGAAGCTTATGACTGTGGACCGCCCTTTTGC
TGAGAAGCACTATGAGGATTTGTCATCGAAGCCTTTCTTTGGCTCTCTGA
TTGAGTACATTACCTCTGGGCCTGTTGTTGCTATGATTTGGGAGGGTGAA
GGTGTTGTTAAGACTGGCCGCACTATTATTGGAGCCACCAACCCTGCGCA
GTCTGCTCCTGGAACCATCCGTGGTGATTTGGCTATCGCGACGGGCAGGA
ATATTATCCATGGAAGTGACTCAGCTGAGAGTGCCCAGAAAGATATCGCC
TTGAGGTTCCCTGATGGCCCTATTAACTGACACAGCAGCCTTCACCCTTG
GATCTATGAGTAAACTAATGTCTGGATGAGGAGCCTAATTGTTCCTGCAG
TTAGACTTATCCCTATCCCTATCGCTATTTCCTTATTTATGGATACTCCT
TGTCGGTGAACTGGTATGAAGGATTGAGTTAAATAGAGACAATCCTGGTT
ATGTTGGCTGCTTTTNNNNNNN
back to top