EY756750

Overview
NameEY756750
Unique NameEY756750
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_RHORT (Nucleoside diphosphate kinase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=ndk PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.502e-25
Identity = 61/131 (46.56%), Postives = 81/131 (61.83%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            +E+T  +IKPD  +R L G I  RFE+ G  + G K + +    AE  YE    + FFGSL+E++TSGPVV  + EGE  V   R ++GATNPA +A  TIR D A +   N +HGSDSAE+A  +IA  F
Sbjct:    3 IERTLSIIKPDATRRNLTGAINARFEEAGLRIVGQKRLRLTTAQAEGFYEVHKERSFFGSLVEFMTSGPVVVQVLEGENAVLKNREVMGATNPANAAEHTIRKDFAESIEANSVHGSDSAENAAHEIAYFF 133          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_PSYCK (Nucleoside diphosphate kinase OS=Psychrobacter cryohalolentis (strain K5) GN=ndk PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.502e-25
Identity = 57/130 (43.85%), Postives = 80/130 (61.54%), Query Frame = 1
Query:   70 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            E+T  +IKPD V    +G I  RFEK G  +   K+M +D   A   Y + + +PF+  L+ ++TSGPV+  + EGE  + T R I+GATNP  +A GTIR D A +   N +HGSDSAESA ++I+  F
Sbjct:    4 ERTLSIIKPDAVAGNNIGAIYDRFEKSGLKIVAAKMMQLDDKKAGGFYAEHAERPFYNDLVSFMTSGPVLVSVLEGENAIATHRDIMGATNPKDAAEGTIRADFASSIDENAVHGSDSAESAAREISYFF 133          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_DIAST (Nucleoside diphosphate kinase OS=Diaphorobacter sp. (strain TPSY) GN=ndk PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.502e-25
Identity = 54/132 (40.91%), Postives = 84/132 (63.64%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRFP 462
            +E+T  +IKPD V + ++G+I  RFE  G  +   +++ + R  AE+ Y     +PFF  L++++ SGPV+    EGE  V   R ++GAT+P ++APGTIR D A +   N +HGSD+AE+AQ ++A  FP
Sbjct:    3 IERTLSIIKPDAVAKNVIGQIYARFEAAGLKIVAARMIHLSRAEAEQFYAVHKERPFFKDLVDFMISGPVMVQALEGENAVLKNRELMGATDPKKAAPGTIRADFADSIDANAVHGSDAAETAQVEVAFFFP 134          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_CHLFF (Nucleoside diphosphate kinase OS=Chlamydophila felis (strain Fe/C-56) GN=ndk PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.502e-25
Identity = 58/131 (44.27%), Postives = 82/131 (62.60%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            MEQT  +IKPD V +  +GEI+  FEK GF +  +K++ +    AE  Y    S+PFF  L++++ SGPVV M+ EG+  V   R I+GATNP ++A GTIR     + G N +HGSDS E+A  +I+  F
Sbjct:    1 MEQTLSIIKPDSVGKAHIGEIVAIFEKAGFRIAAMKMVHLSAKEAEGFYAVHKSRPFFQELVDFMISGPVVVMVLEGDNAVVRNREIMGATNPQEAAQGTIRAQFGESIGINAVHGSDSLENAAIEISYFF 131          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_CAMC1 (Nucleoside diphosphate kinase OS=Campylobacter concisus (strain 13826) GN=ndk PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.502e-25
Identity = 56/131 (42.75%), Postives = 82/131 (62.60%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            M++T  +IKPD V++ +VG+II RFE  G  +   K + + +  A+  Y     +PFF  L++++ SGPVV M+ EGE  V   R ++GATNP ++APGTIR D A +   N +HGSDS E+A  +I   F
Sbjct:    1 MQRTLSIIKPDAVKKNVVGKIIDRFESNGLRIAAAKKIKLSKCDAKAFYAVHKDRPFFNDLVDFMVSGPVVVMVLEGENAVAKNRELMGATNPKEAAPGTIRADFADSIDANAVHGSDSLENAVNEINFFF 131          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_AGRT5 (Nucleoside diphosphate kinase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ndk PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.502e-25
Identity = 59/136 (43.38%), Postives = 82/136 (60.29%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRFPDGPI 474
            +E+TF MIKPD  +R L G I   FE  G  +   K + + +  AE  Y     +PFFG L+E +TSGP +  + EGE  +   R I+GATNPAQ+A GTIR   A++ G N +HGSD+ E+A ++IA  F +  I
Sbjct:    3 IERTFSMIKPDATKRNLTGAITKVFEDNGLRIVASKRVWMSKREAEGFYAVHKERPFFGELVEGMTSGPTIVQVLEGENAILKNREIMGATNPAQAAEGTIRKSFALSIGENSVHGSDAPETAAQEIAYWFAETEI 138          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_YERPB (Nucleoside diphosphate kinase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=ndk PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.267e-25
Identity = 55/131 (41.98%), Postives = 82/131 (62.60%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            +E+TF +IKP+ V    +G I  RFE  GF +   K++ + +  AE  Y +   +PFF  L+E++TSGP++  + EGE  V+  R I+GATNP  +  GT+R D A +   N +HGSD+ ESAQ++IA  F
Sbjct:    3 LERTFSIIKPNAVANNNIGAIYARFESAGFKIIAAKMLHLTKEQAEGFYAEHKGRPFFDGLVEFMTSGPIMVQVLEGENAVQRHRDIMGATNPDNALAGTLRADFADSFTANAVHGSDAVESAQREIAYFF 133          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_VIBPA (Nucleoside diphosphate kinase OS=Vibrio parahaemolyticus GN=ndk PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.267e-25
Identity = 55/136 (40.44%), Postives = 83/136 (61.03%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRFPDGPI 474
            +E+TF ++KPD V+R L+GEI  R EK G  +   K++ +    A   Y +   K FF  L E++TSGP++  + EGE  +   R ++G TNP ++A GT+R D A++   N +HGSDS ESA ++I   FP+  I
Sbjct:    3 LERTFSIVKPDAVERNLIGEIYNRIEKAGLRIIAAKMVHLTEEQASGFYAEHEGKEFFQPLKEFMTSGPIMVQVLEGENAIARYRELMGKTNPEEAAAGTLRADYALSMRHNSVHGSDSPESAAREIEFFFPESEI 138          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_VIBCM (Nucleoside diphosphate kinase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=ndk PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.267e-25
Identity = 56/136 (41.18%), Postives = 83/136 (61.03%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRFPDGPI 474
            +E+TF +IKPD V+R L+GEI  R EK G  +   K++ +    A   Y +   KPFF  L E++TSGP++  + EGE  +   R ++G TNP ++A GT+R D A++   N +HGSDS  SA ++I   FP+  I
Sbjct:    3 LERTFSIIKPDAVKRNLIGEIYHRIEKAGLQIIAAKMVHLSEEQASGFYAEHEGKPFFEPLKEFMTSGPIMVQVLEGENAIARYRELMGKTNPEEAACGTLRADYALSMRYNSVHGSDSPASAAREIEFFFPESEI 138          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_VIBCH (Nucleoside diphosphate kinase OS=Vibrio cholerae GN=ndk PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.267e-25
Identity = 56/136 (41.18%), Postives = 83/136 (61.03%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRFPDGPI 474
            +E+TF +IKPD V+R L+GEI  R EK G  +   K++ +    A   Y +   KPFF  L E++TSGP++  + EGE  +   R ++G TNP ++A GT+R D A++   N +HGSDS  SA ++I   FP+  I
Sbjct:    3 LERTFSIIKPDAVKRNLIGEIYHRIEKAGLQIIAAKMVHLSEEQASGFYAEHEGKPFFEPLKEFMTSGPIMVQVLEGENAIARYRELMGKTNPEEAACGTLRADYALSMRYNSVHGSDSPASAAREIEFFFPESEI 138          
The following BLAST results are available for this feature:
BLAST of EY756750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_RHORT2.502e-2546.56Nucleoside diphosphate kinase OS=Rhodospirillum ru... [more]
NDK_PSYCK2.502e-2543.85Nucleoside diphosphate kinase OS=Psychrobacter cry... [more]
NDK_DIAST2.502e-2540.91Nucleoside diphosphate kinase OS=Diaphorobacter sp... [more]
NDK_CHLFF2.502e-2544.27Nucleoside diphosphate kinase OS=Chlamydophila fel... [more]
NDK_CAMC12.502e-2542.75Nucleoside diphosphate kinase OS=Campylobacter con... [more]
NDK_AGRT52.502e-2543.38Nucleoside diphosphate kinase OS=Agrobacterium tum... [more]
NDK_YERPB3.267e-2541.98Nucleoside diphosphate kinase OS=Yersinia pseudotu... [more]
NDK_VIBPA3.267e-2540.44Nucleoside diphosphate kinase OS=Vibrio parahaemol... [more]
NDK_VIBCM3.267e-2541.18Nucleoside diphosphate kinase OS=Vibrio cholerae s... [more]
NDK_VIBCH3.267e-2541.18Nucleoside diphosphate kinase OS=Vibrio cholerae G... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-C04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756750 ID=EY756750; Name=EY756750; organism=Citrus sinensis; type=EST; length=672bp
TGCTCGACCCACGCGTCCGATTTCACTCAATTCTCAAAAAAGTTGGTTTC
TCTGAATCTCAAAGAAATGGAACAAACTTTCATCATGATCAAGCCCGATG
GGGTCCAAAGAGGCCTTGTTGGTGAAATCATCATCAGATTTGAGAAGAAG
GGTTTCTCTTTGAAGGGTTTGAAGCTTATGACTGTGGACCGCCCTTTTGC
TGAGAAGCACTATGAGGATTTGTCATCGAAGCCTTTCTTTGGCTCTCTGA
TTGAGTACATTACCTCTGGGCCTGTTGTTGCTATGATTTGGGAGGGTGAA
GGTGTTGTTAAGACTGGCCGCACTATTATTGGAGCCACCAACCCTGCGCA
GTCTGCTCCTGGAACCATCCGTGGTGATTTGGCTATCGCGACGGGCAGGA
ATATTATCCATGGAAGTGACTCAGCTGAGAGTGCCCAGAAAGATATCGCC
TTGAGGTTCCCTGATGGCCCTATTAACTGACACAGCAGCCTTCACCCTTG
GATCTATGAGTAAACTAATGTCTGGATGAGGAGCCTAATTGTTCCTGCAG
TTAGACTTATCCCTATCCCTATCGCTATTTCCTTATTTATGGATACTCCT
TGTCGGTGAACTGGTATGAAGGATTGAGTTAAATAGAGACAATCCTGGTT
ATGTTGGCTGCTTTTNNNNNNN
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