EY756750

Overview
NameEY756750
Unique NameEY756750
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_VIBC3 (Nucleoside diphosphate kinase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=ndk PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.267e-25
Identity = 56/136 (41.18%), Postives = 83/136 (61.03%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRFPDGPI 474
            +E+TF +IKPD V+R L+GEI  R EK G  +   K++ +    A   Y +   KPFF  L E++TSGP++  + EGE  +   R ++G TNP ++A GT+R D A++   N +HGSDS  SA ++I   FP+  I
Sbjct:    3 LERTFSIIKPDAVKRNLIGEIYHRIEKAGLQIIAAKMVHLSEEQASGFYAEHEGKPFFEPLKEFMTSGPIMVQVLEGENAIARYRELMGKTNPEEAACGTLRADYALSMRYNSVHGSDSPASAAREIEFFFPESEI 138          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_SILST (Nucleoside diphosphate kinase OS=Silicibacter sp. (strain TM1040) GN=ndk PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.267e-25
Identity = 56/131 (42.75%), Postives = 83/131 (63.36%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            +E+TF +IKPD  +R L G I  +FE+ G  +   K + + +  A K Y   + +PF+  L E+++S PVV  + EGEG +   R I+GATNPA +APGTIR + A + G N +HGSD+ E+A ++IA  F
Sbjct:    3 LERTFSIIKPDATRRNLTGAINAKFEEAGLRIVAQKRIHMTKAQAGKFYAVHAERPFYDELCEFMSSAPVVVQVLEGEGAIAKNREIMGATNPADAAPGTIRAEFAESVGENSVHGSDAPETAAEEIAYFF 133          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_RHOCS (Nucleoside diphosphate kinase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=ndk PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.267e-25
Identity = 58/131 (44.27%), Postives = 82/131 (62.60%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            +E+T  ++KPD  +R L G+I  RFE+ G  +   K + + R  AE+ Y   + +PF+G L+ ++ SGPVV  + EGE  V   R I+GATNPA +APGTIR D A +   N +HGSDS E+A  +IA  F
Sbjct:    3 VERTLSIVKPDATRRNLTGKINARFEEAGLRIVAQKRIRLTREQAEQFYIVHAERPFYGELVSFMISGPVVVQVLEGENAVARNREIMGATNPANAAPGTIRKDFAESIEANSVHGSDSLENAATEIAYFF 133          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_PSEPG (Nucleoside diphosphate kinase OS=Pseudomonas putida (strain GB-1) GN=ndk PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.267e-25
Identity = 54/131 (41.22%), Postives = 84/131 (64.12%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            +++TF +IKPD V + ++G+I  RFE+ G  +   K+  + +  AE  Y + S++ FFG L+ ++TSGPVV  + EGE  +   R ++GATNP ++A GTIR D A +   N +HGSDS  +A ++IA  F
Sbjct:    3 VQRTFSIIKPDAVAKNVIGKITTRFEEAGLKIVASKIKQLSKAEAEGFYAEHSARGFFGDLVAFMTSGPVVVQVLEGENAIALNRELMGATNPKEAAAGTIRADFAESIDANAVHGSDSEAAAAREIAYFF 133          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_PSEFS (Nucleoside diphosphate kinase OS=Pseudomonas fluorescens (strain SBW25) GN=ndk PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.267e-25
Identity = 55/131 (41.98%), Postives = 83/131 (63.36%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            +++TF +IKPD V + ++GEI  RFEK G  +   KL  + +  AE  Y + S++ FFG L+ ++ SGPVV  + EGE  +   R ++GATNP ++A GTIR D A +   N +HGSDS  +A ++I+  F
Sbjct:    3 VQRTFSIIKPDAVAKNVIGEITTRFEKAGLKVVASKLKQLSKAEAEGFYAEHSARGFFGDLVAFMISGPVVVQVLEGENAIALNRELMGATNPKEAAAGTIRADFAESIDANAVHGSDSEAAAAREISYFF 133          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_FLAPJ (Nucleoside diphosphate kinase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=ndk PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.267e-25
Identity = 58/129 (44.96%), Postives = 83/129 (64.34%), Query Frame = 1
Query:   73 QTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            +TF MIKPDGVQ G +G I+    + GF +  +KL  +    A+K YE  +++PF+G L+ +++ GP+VA I E +  V+  RT+IGATNPA +A GTIR   A + G N +HGSDS E+A  + A  F
Sbjct:    5 RTFTMIKPDGVQNGHIGGIVNMITEAGFKIVSMKLTQLTVADAQKFYEVHAARPFYGELVAFMSRGPIVAAILEKDNAVEDFRTLIGATNPADAAEGTIRKKYATSIGENAVHGSDSDENAAIEGAFHF 133          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_THIDA (Nucleoside diphosphate kinase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=ndk PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.267e-25
Identity = 54/132 (40.91%), Postives = 83/132 (62.88%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRFP 462
            +++TF +IKPD V + ++G+I+ RFE  G  +   K+  + R  AE  Y     +PFF  L++++ SGPVV  + EGE  +   RT++GAT+P ++ PGTIR D A +   N +HGSD+ E+A  +IA  FP
Sbjct:    3 VQRTFSIIKPDAVAKNVIGKIVSRFETNGLKVVASKMKHLSRQEAEGFYAVHKDRPFFKDLVDFMVSGPVVLQVLEGEDAIAKNRTLMGATDPKKAEPGTIRADFAESIDANAVHGSDAPETAAVEIAYFFP 134          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_PSEU2 (Nucleoside diphosphate kinase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=ndk PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.267e-25
Identity = 55/131 (41.98%), Postives = 83/131 (63.36%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            +++TF +IKPD V + ++GEI  RFEK G  +   KL  + +  AE  Y + S++ FFG L+ ++ SGPVV  + EGE  +   R ++GATNP ++A GTIR D A +   N +HGSDS  +A ++I+  F
Sbjct:    3 VQRTFSIIKPDAVAKNVIGEITTRFEKAGLRVVASKLKQLSKAEAEGFYAEHSARGFFGDLVAFMISGPVVVQVLEGENAIALNRELMGATNPKEAAAGTIRADFADSIDANAVHGSDSEAAAAREISYFF 133          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_PSESM (Nucleoside diphosphate kinase OS=Pseudomonas syringae pv. tomato GN=ndk PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.267e-25
Identity = 55/131 (41.98%), Postives = 83/131 (63.36%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            +++TF +IKPD V + ++GEI  RFEK G  +   KL  + +  AE  Y + S++ FFG L+ ++ SGPVV  + EGE  +   R ++GATNP ++A GTIR D A +   N +HGSDS  +A ++I+  F
Sbjct:    3 VQRTFSIIKPDAVAKNVIGEITTRFEKAGLRVVASKLKQLSKAEAEGFYAEHSARGFFGDLVAFMISGPVVVQVLEGENAIALNRELMGATNPKEAAAGTIRADFADSIDANAVHGSDSEAAAAREISYFF 133          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_PSEPW (Nucleoside diphosphate kinase OS=Pseudomonas putida (strain W619) GN=ndk PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.267e-25
Identity = 54/131 (41.22%), Postives = 83/131 (63.36%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            +++TF +IKPD V + ++G+I  RFE+ G  +   K+  + +  AE  Y + S + FFG L+ ++TSGPVV  + EGE  +   R ++GATNP ++A GTIR D A +   N +HGSDS  +A ++IA  F
Sbjct:    3 VQRTFSIIKPDAVAKNVIGKITTRFEEAGLKIVASKIKQLSKAEAEGFYAEHSERGFFGDLVAFMTSGPVVVQVLEGENAIALNRELMGATNPKEAAAGTIRADFAESIDANAVHGSDSEAAAAREIAYFF 133          
The following BLAST results are available for this feature:
BLAST of EY756750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_VIBC33.267e-2541.18Nucleoside diphosphate kinase OS=Vibrio cholerae s... [more]
NDK_SILST3.267e-2542.75Nucleoside diphosphate kinase OS=Silicibacter sp. ... [more]
NDK_RHOCS3.267e-2544.27Nucleoside diphosphate kinase OS=Rhodospirillum ce... [more]
NDK_PSEPG3.267e-2541.22Nucleoside diphosphate kinase OS=Pseudomonas putid... [more]
NDK_PSEFS3.267e-2541.98Nucleoside diphosphate kinase OS=Pseudomonas fluor... [more]
NDK_FLAPJ3.267e-2544.96Nucleoside diphosphate kinase OS=Flavobacterium ps... [more]
NDK_THIDA4.267e-2540.91Nucleoside diphosphate kinase OS=Thiobacillus deni... [more]
NDK_PSEU24.267e-2541.98Nucleoside diphosphate kinase OS=Pseudomonas syrin... [more]
NDK_PSESM4.267e-2541.98Nucleoside diphosphate kinase OS=Pseudomonas syrin... [more]
NDK_PSEPW4.267e-2541.22Nucleoside diphosphate kinase OS=Pseudomonas putid... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-C04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756750 ID=EY756750; Name=EY756750; organism=Citrus sinensis; type=EST; length=672bp
TGCTCGACCCACGCGTCCGATTTCACTCAATTCTCAAAAAAGTTGGTTTC
TCTGAATCTCAAAGAAATGGAACAAACTTTCATCATGATCAAGCCCGATG
GGGTCCAAAGAGGCCTTGTTGGTGAAATCATCATCAGATTTGAGAAGAAG
GGTTTCTCTTTGAAGGGTTTGAAGCTTATGACTGTGGACCGCCCTTTTGC
TGAGAAGCACTATGAGGATTTGTCATCGAAGCCTTTCTTTGGCTCTCTGA
TTGAGTACATTACCTCTGGGCCTGTTGTTGCTATGATTTGGGAGGGTGAA
GGTGTTGTTAAGACTGGCCGCACTATTATTGGAGCCACCAACCCTGCGCA
GTCTGCTCCTGGAACCATCCGTGGTGATTTGGCTATCGCGACGGGCAGGA
ATATTATCCATGGAAGTGACTCAGCTGAGAGTGCCCAGAAAGATATCGCC
TTGAGGTTCCCTGATGGCCCTATTAACTGACACAGCAGCCTTCACCCTTG
GATCTATGAGTAAACTAATGTCTGGATGAGGAGCCTAATTGTTCCTGCAG
TTAGACTTATCCCTATCCCTATCGCTATTTCCTTATTTATGGATACTCCT
TGTCGGTGAACTGGTATGAAGGATTGAGTTAAATAGAGACAATCCTGGTT
ATGTTGGCTGCTTTTNNNNNNN
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