EY756750

Overview
NameEY756750
Unique NameEY756750
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1498 contig Csv1_Contig1498:65..738. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_BRUME (Nucleoside diphosphate kinase OS=Brucella melitensis GN=ndk PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.573e-25
Identity = 56/131 (42.75%), Postives = 81/131 (61.83%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            +E+TF MIKPD  +R L G II + E+ G  +   K + + R  AE  Y     +PFFG L+E+++SGP V  + EGE  +   R ++GATNPA +  GTIR   A++ G N +HGSD+ E+A ++IA  F
Sbjct:    3 IERTFSMIKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKAFALSIGENSVHGSDAPETAAEEIAYWF 133          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_JANSC (Nucleoside diphosphate kinase OS=Jannaschia sp. (strain CCS1) GN=ndk PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.279e-25
Identity = 54/131 (41.22%), Postives = 83/131 (63.36%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            +++TF +IKPD  +R L G+I  +FE+ G  +   K + +    A+  Y   S +PFFG L E++ S P+V  + EGE  +   R ++GATNPA +APGTIR + A++ G N +HGSD+ E+A ++IA  F
Sbjct:    3 IQRTFSIIKPDATKRNLTGQIAAKFEEAGLRIVASKRIQLTLAQAQAFYGVHSERPFFGELCEFMISEPIVVQVLEGEDAIVKNREVMGATNPADAAPGTIRKEFALSIGENSVHGSDAPETAAEEIAFFF 133          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_GRAFK (Nucleoside diphosphate kinase OS=Gramella forsetii (strain KT0803) GN=ndk PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.279e-25
Identity = 59/129 (45.74%), Postives = 81/129 (62.79%), Query Frame = 1
Query:   73 QTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            +TF MIKPD V+ G +G I+ +    GF +  LKL  + +  AE  Y   + +PFFG L+E++T GP+VA I E +  V+  RT+IGATNP  +A GTIR   A + G N +HGSDS E+AQ + A  F
Sbjct:    5 RTFTMIKPDAVENGHIGGILDQITASGFRIVALKLTQMTQRDAETFYAVHNERPFFGELVEFMTRGPIVAAILEKDNAVEDFRTLIGATNPEDAAEGTIRKKYAKSIGENAVHGSDSDENAQIEGAFHF 133          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_CHLCV (Nucleoside diphosphate kinase OS=Chlamydophila caviae GN=ndk PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.279e-25
Identity = 57/127 (44.88%), Postives = 80/127 (62.99%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDI 447
            MEQT  +IKPD V +  +GEI+  FEK GF +  +K++ +    AE  Y    S+PFF  L++++ SGPVV M+ EG+  V   R I+GATNP ++A GTIR     + G N +HGSDS E+A  +I
Sbjct:    1 MEQTLSIIKPDSVGKAHIGEIVAIFEKSGFRIAAMKMVHLSVKEAEGFYAVHKSRPFFQELVDFMISGPVVVMVLEGDNAVVRNREIMGATNPQEAAQGTIRAQFGESIGINAVHGSDSLENAAIEI 127          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_ACTPJ (Nucleoside diphosphate kinase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=ndk PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.279e-25
Identity = 56/136 (41.18%), Postives = 85/136 (62.50%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRFPDGPI 474
            ++QT  +IKPD  QR L+G+I+   E+ G ++K LK + +++  AE  Y +   K FF  L+E++ S P+VA++ EGE  +   R ++GATNP Q   GTIR   AI+   N +HGSDS +SA+++IA  F    I
Sbjct:    2 IQQTLCLIKPDATQRNLIGKILSHLEEAGLTIKALKKVQLNQEQAEGFYAEHQGKEFFAPLVEFMISAPIVAVVLEGENAISHYRELMGATNPEQRKAGTIRALYAISGRENSVHGSDSEQSAKREIAYFFTPNEI 137          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_ACTP7 (Nucleoside diphosphate kinase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=ndk PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.279e-25
Identity = 56/136 (41.18%), Postives = 85/136 (62.50%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRFPDGPI 474
            ++QT  +IKPD  QR L+G+I+   E+ G ++K LK + +++  AE  Y +   K FF  L+E++ S P+VA++ EGE  +   R ++GATNP Q   GTIR   AI+   N +HGSDS +SA+++IA  F    I
Sbjct:    2 IQQTLCLIKPDATQRNLIGKILSHLEEAGLTIKALKKVQLNQEQAEGFYAEHQGKEFFAPLVEFMISAPIVAVVLEGENAISHYRELMGATNPEQRKAGTIRALYAISGRENSVHGSDSEQSAKREIAYFFTPNEI 137          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_ACIF5 (Nucleoside diphosphate kinase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=ndk PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.279e-25
Identity = 55/131 (41.98%), Postives = 83/131 (63.36%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            +E+T  +IKPD VQ+  +G I+ RFEK G  +   K++ + R  A   Y    ++PF+G L ++++SGPV+  + EGEG +   R ++GATNP  +A GTIR D A +   N +HGSDSAE+A  +I+  F
Sbjct:    3 VERTLSIIKPDAVQKNAIGAILGRFEKAGLRIAAAKMLHLSRDDAGGFYAVHQARPFYGELCDFMSSGPVLVTVLEGEGAIAKNRDLMGATNPKDAAAGTIRADFADSIDANAVHGSDSAETAAWEISYFF 133          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_ACIF2 (Nucleoside diphosphate kinase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=ndk PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.279e-25
Identity = 55/131 (41.98%), Postives = 83/131 (63.36%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            +E+T  +IKPD VQ+  +G I+ RFEK G  +   K++ + R  A   Y    ++PF+G L ++++SGPV+  + EGEG +   R ++GATNP  +A GTIR D A +   N +HGSDSAE+A  +I+  F
Sbjct:    3 VERTLSIIKPDAVQKNAIGAILGRFEKAGLRIAAAKMLHLSRDDAGGFYAVHQARPFYGELCDFMSSGPVLVTVLEGEGAIAKNRDLMGATNPKDAAAGTIRADFADSIDANAVHGSDSAETAAWEISYFF 133          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_XANOR (Nucleoside diphosphate kinase OS=Xanthomonas oryzae pv. oryzae GN=ndk PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.506e-25
Identity = 57/131 (43.51%), Postives = 78/131 (59.54%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            +E+T  +IKPD V + ++GEI  RFEK G  +   K   + R  AE  Y     +PFF +L+E++ SGPV+    EGE  V   R ++GATNP  +APGTIR D A +   N  HGSDS E+A  ++A  F
Sbjct:    3 LERTLSIIKPDAVAKNVIGEIYSRFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVAAHRDLLGATNPKDAAPGTIRADFADSIDANAAHGSDSVENAANEVAYFF 133          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_XANOM (Nucleoside diphosphate kinase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=ndk PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.506e-25
Identity = 57/131 (43.51%), Postives = 78/131 (59.54%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            +E+T  +IKPD V + ++GEI  RFEK G  +   K   + R  AE  Y     +PFF +L+E++ SGPV+    EGE  V   R ++GATNP  +APGTIR D A +   N  HGSDS E+A  ++A  F
Sbjct:    3 LERTLSIIKPDAVAKNVIGEIYSRFEKAGLKVVAAKYKQLSRREAEGFYAVHRERPFFNALVEFMISGPVMIQALEGENAVAAHRDLLGATNPKDAAPGTIRADFADSIDANAAHGSDSVENAANEVAYFF 133          
The following BLAST results are available for this feature:
BLAST of EY756750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_BRUME5.573e-2542.75Nucleoside diphosphate kinase OS=Brucella melitens... [more]
NDK_JANSC7.279e-2541.22Nucleoside diphosphate kinase OS=Jannaschia sp. (s... [more]
NDK_GRAFK7.279e-2545.74Nucleoside diphosphate kinase OS=Gramella forsetii... [more]
NDK_CHLCV7.279e-2544.88Nucleoside diphosphate kinase OS=Chlamydophila cav... [more]
NDK_ACTPJ7.279e-2541.18Nucleoside diphosphate kinase OS=Actinobacillus pl... [more]
NDK_ACTP77.279e-2541.18Nucleoside diphosphate kinase OS=Actinobacillus pl... [more]
NDK_ACIF57.279e-2541.98Nucleoside diphosphate kinase OS=Acidithiobacillus... [more]
NDK_ACIF27.279e-2541.98Nucleoside diphosphate kinase OS=Acidithiobacillus... [more]
NDK_XANOR9.506e-2543.51Nucleoside diphosphate kinase OS=Xanthomonas oryza... [more]
NDK_XANOM9.506e-2543.51Nucleoside diphosphate kinase OS=Xanthomonas oryza... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-C04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756750 ID=EY756750; Name=EY756750; organism=Citrus sinensis; type=EST; length=672bp
TGCTCGACCCACGCGTCCGATTTCACTCAATTCTCAAAAAAGTTGGTTTC
TCTGAATCTCAAAGAAATGGAACAAACTTTCATCATGATCAAGCCCGATG
GGGTCCAAAGAGGCCTTGTTGGTGAAATCATCATCAGATTTGAGAAGAAG
GGTTTCTCTTTGAAGGGTTTGAAGCTTATGACTGTGGACCGCCCTTTTGC
TGAGAAGCACTATGAGGATTTGTCATCGAAGCCTTTCTTTGGCTCTCTGA
TTGAGTACATTACCTCTGGGCCTGTTGTTGCTATGATTTGGGAGGGTGAA
GGTGTTGTTAAGACTGGCCGCACTATTATTGGAGCCACCAACCCTGCGCA
GTCTGCTCCTGGAACCATCCGTGGTGATTTGGCTATCGCGACGGGCAGGA
ATATTATCCATGGAAGTGACTCAGCTGAGAGTGCCCAGAAAGATATCGCC
TTGAGGTTCCCTGATGGCCCTATTAACTGACACAGCAGCCTTCACCCTTG
GATCTATGAGTAAACTAATGTCTGGATGAGGAGCCTAATTGTTCCTGCAG
TTAGACTTATCCCTATCCCTATCGCTATTTCCTTATTTATGGATACTCCT
TGTCGGTGAACTGGTATGAAGGATTGAGTTAAATAGAGACAATCCTGGTT
ATGTTGGCTGCTTTTNNNNNNN
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