EY756750

Overview
NameEY756750
Unique NameEY756750
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_SYNS9 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9902) GN=ndk PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.842e-42
Identity = 81/136 (59.56%), Postives = 103/136 (75.74%), Query Frame = 1
Query:   70 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRFPDGPIN 477
            E+TF+ IKPDGVQRGLVGEI+ RFE+KGF L GLK +T  R  AE+HY     +PFF  L+ +ITSGPVVAM+WEG+GV+ + R +IGAT P +S PGTIRGDLA+  GRN+IHGSD+ E+A+ +I L F    +N
Sbjct:    3 ERTFVAIKPDGVQRGLVGEILGRFERKGFKLVGLKQITPSRALAEEHYGVHKERPFFAGLVGFITSGPVVAMVWEGDGVIASARKLIGATKPLESEPGTIRGDLAVNIGRNVIHGSDAPETAEFEIGLWFQPSELN 138          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_SYNS3 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9311) GN=ndk PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.842e-42
Identity = 81/130 (62.31%), Postives = 103/130 (79.23%), Query Frame = 1
Query:   70 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF 459
            E++FI IKPDGVQRGLVGEI+ RFE+KGF L GLK +T  R  AE+HY     +PFFG L+++ITSGPVVAM+WEG+GV+ + R +IGAT P ++ PGTIRGDLAI  GRN+IHGSD+ E+A+ +I L F
Sbjct:    4 ERSFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQLTPSRELAEQHYGVHKERPFFGGLVDFITSGPVVAMVWEGDGVITSARKMIGATKPLEAEPGTIRGDLAINIGRNVIHGSDAPETAEFEIGLWF 133          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_SYNJB (Nucleoside diphosphate kinase OS=Synechococcus sp. GN=ndk PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.842e-42
Identity = 83/149 (55.70%), Postives = 107/149 (71.81%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRFPDGP-IN*HSSLHPWIYE 510
            ME+TFI IKPDGVQRGLVG II R E +G+ L GLKL+ V +  AE HY +   +PFF SL+++ITSGPVVAM+W+G+GV+   R +IG TNP ++ PGTIRGD  I  GRN+IHGSD  E+AQ++IAL F +   ++       WIYE
Sbjct:    1 MERTFIAIKPDGVQRGLVGTIIQRLESRGYQLVGLKLVQVSQELAEAHYAEHKERPFFHSLVKFITSGPVVAMVWQGKGVIAAARKLIGKTNPLEAEPGTIRGDFGIDIGRNLIHGSDGVETAQREIALWFDESELVSWTPVAQSWIYE 149          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_SYNJA (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=ndk PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.842e-42
Identity = 82/149 (55.03%), Postives = 106/149 (71.14%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRFPDGP-IN*HSSLHPWIYE 510
            ME+TFI IKPDGVQRGLVG II R E +G+ L GLKL+ V +  AE HY +   +PFF  L+++ITSGPVVAM+W+G+GV+   R +IG TNP  + PGTIRGD  I  GRN++HGSD  E+AQ++IAL F +   +N   +   WIYE
Sbjct:    1 MERTFIAIKPDGVQRGLVGSIIQRLESRGYQLVGLKLVQVSQELAEAHYAEHRERPFFPGLVKFITSGPVVAMVWQGKGVIAAARKLIGKTNPLDAEPGTIRGDFGIDIGRNLVHGSDGPETAQREIALWFQESELVNWTPATQSWIYE 149          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDKC_DICDI (Nucleoside diphosphate kinase, cytosolic OS=Dictyostelium discoideum GN=ndkC-1 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.842e-42
Identity = 85/155 (54.84%), Postives = 108/155 (69.68%), Query Frame = 1
Query:   46 VSLNLKEMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRFPDGPIN*HSSLHPWIYE 510
            +S N    E+TF+ +KPDGV RGLVGEII R+EKKGF L GLK +   +  AE HY +   +PFFG L+ +ITSGPVVAM++EG+GVV + R +IG TNP  SAPG+IRGD  +  GRNIIHGSDS ESA ++IAL F    +      +P +YE
Sbjct:    1 MSTNKVNKERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAMVFEGKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIHGSDSVESANREIALWFKPEELLTEVKPNPNLYE 155          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_BACLD (Nucleoside diphosphate kinase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=ndk PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.118e-41
Identity = 80/148 (54.05%), Postives = 106/148 (71.62%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF-PDGPIN*HSSLHPWIY 507
            ME+TF+M+KPDGVQR L+GEI++RFE+KG  L G KLM V    A +HY++ + KPFFG L+++ITSGPV AM+WEGE  +   R +IG TNP ++ PGTIRGD  +  G+NIIHGSDS ESA ++I L F  D  +     ++ WIY
Sbjct:    1 MEKTFVMVKPDGVQRQLIGEILLRFERKGLQLIGAKLMKVSEETAGEHYKEHNGKPFFGELVDFITSGPVFAMVWEGEDAIAVARQLIGKTNPKEALPGTIRGDFGMFVGKNIIHGSDSPESAAREINLFFKEDELVEDEKLMNQWIY 148          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK3_HUMAN (Nucleoside diphosphate kinase 3 OS=Homo sapiens GN=NME3 PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 1.907e-41
Identity = 81/148 (54.73%), Postives = 106/148 (71.62%), Query Frame = 1
Query:   70 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF-PDGPIN*HSSLHPWIYE 510
            E+TF+ +KPDGVQR LVGEI+ RFE+KGF L  LKL+        +HY +L  +PF+G L++Y+ SGPVVAM+W+G  VV+T R +IGATNPA + PGTIRGD  I  G+N+IHGSDS ESA+++IAL F  D  +    S   W+YE
Sbjct:   22 ERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFYGRLVKYMASGPVVAMVWQGLDVVRTSRALIGATNPADAPPGTIRGDFCIEVGKNLIHGSDSVESARREIALWFRADELLCWEDSAGHWLYE 169          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_STAHJ (Nucleoside diphosphate kinase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=ndk PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.252e-41
Identity = 82/149 (55.03%), Postives = 107/149 (71.81%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRFPDGPIN*HSS-LHPWIYE 510
            ME+TF+MIKPD +QR LVGEII R E+KG  L G KLMTV +  AE+HY + + KPF+G LI +ITS PV AM+ EGE  V   R IIG TNP+++ PG+IRGDL +  GRN+IHGSDS ESAQ++I L F +  ++ + +    W+YE
Sbjct:    1 MERTFLMIKPDAIQRNLVGEIISRIERKGLKLVGAKLMTVPQALAEEHYSEHTDKPFYGKLISFITSAPVFAMVVEGEDAVDVSRHIIGKTNPSEATPGSIRGDLGLTVGRNVIHGSDSVESAQREINLWFKEEELSSYEAPRDTWLYE 149          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDKM_DICDI (Nucleoside diphosphate kinase, mitochondrial OS=Dictyostelium discoideum GN=ndkM PE=1 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 3.252e-41
Identity = 90/159 (56.60%), Postives = 112/159 (70.44%), Query Frame = 1
Query:   34 SKKLVSLNLKEMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRFPDGPIN*HSSLHPWIYE 510
            S  LV L     E++FI IK    QR L+GEII RFEKKGF L G+K++      A KHYEDL+ KPFF  L+++ +SG VVAM++EG+ VV+TGR +IGAT+P+QSAPGTIR DL I TGRNIIHGSDS ESA  +IAL F +  I    S +P +YE
Sbjct:   61 SVPLVGLPGTNQERSFIAIKVSSTQRRLIGEIIARFEKKGFKLVGIKILVPTPEHAAKHYEDLNKKPFFNGLVKFFSSGAVVAMVFEGKDVVRTGRVLIGATDPSQSAPGTIRFDLCIETGRNIIHGSDSNESAAHEIALWFKEDEIANWVSTNP-VYE 218          
BLAST of EY756750 vs. ExPASy Swiss-Prot
Match: NDK_PELTS (Nucleoside diphosphate kinase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=ndk PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.248e-41
Identity = 85/149 (57.05%), Postives = 107/149 (71.81%), Query Frame = 1
Query:   67 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIATGRNIIHGSDSAESAQKDIALRF-PDGPIN*HSSLHPWIYE 510
            ME+T++MIKPDGVQRGLVGEII RFEK+GF + GLK++ + R  AEKHY +   KPFF  L+ YITS PVVAM+ EG+  V   R ++GAT+P ++APGTIRG   I  GRN+IHGSDS  SAQ++IAL F  D  +     L  W+YE
Sbjct:    1 MERTYLMIKPDGVQRGLVGEIIARFEKRGFKIVGLKMIRIGRELAEKHYGEHKGKPFFEPLVGYITSSPVVAMVIEGKNAVGAAREMMGATDPLKAAPGTIRGTYGIDIGRNVIHGSDSPASAQREIALFFSADELMEYGLELDRWVYE 149          
The following BLAST results are available for this feature:
BLAST of EY756750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_SYNS93.842e-4259.56Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK_SYNS33.842e-4262.31Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK_SYNJB3.842e-4255.70Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK_SYNJA3.842e-4255.03Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDKC_DICDI3.842e-4254.84Nucleoside diphosphate kinase, cytosolic OS=Dictyo... [more]
NDK_BACLD1.118e-4154.05Nucleoside diphosphate kinase OS=Bacillus lichenif... [more]
NDK3_HUMAN1.907e-4154.73Nucleoside diphosphate kinase 3 OS=Homo sapiens GN... [more]
NDK_STAHJ3.252e-4155.03Nucleoside diphosphate kinase OS=Staphylococcus ha... [more]
NDKM_DICDI3.252e-4156.60Nucleoside diphosphate kinase, mitochondrial OS=Di... [more]
NDK_PELTS4.248e-4157.05Nucleoside diphosphate kinase OS=Pelotomaculum the... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-C04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756750 ID=EY756750; Name=EY756750; organism=Citrus sinensis; type=EST; length=672bp
TGCTCGACCCACGCGTCCGATTTCACTCAATTCTCAAAAAAGTTGGTTTC
TCTGAATCTCAAAGAAATGGAACAAACTTTCATCATGATCAAGCCCGATG
GGGTCCAAAGAGGCCTTGTTGGTGAAATCATCATCAGATTTGAGAAGAAG
GGTTTCTCTTTGAAGGGTTTGAAGCTTATGACTGTGGACCGCCCTTTTGC
TGAGAAGCACTATGAGGATTTGTCATCGAAGCCTTTCTTTGGCTCTCTGA
TTGAGTACATTACCTCTGGGCCTGTTGTTGCTATGATTTGGGAGGGTGAA
GGTGTTGTTAAGACTGGCCGCACTATTATTGGAGCCACCAACCCTGCGCA
GTCTGCTCCTGGAACCATCCGTGGTGATTTGGCTATCGCGACGGGCAGGA
ATATTATCCATGGAAGTGACTCAGCTGAGAGTGCCCAGAAAGATATCGCC
TTGAGGTTCCCTGATGGCCCTATTAACTGACACAGCAGCCTTCACCCTTG
GATCTATGAGTAAACTAATGTCTGGATGAGGAGCCTAATTGTTCCTGCAG
TTAGACTTATCCCTATCCCTATCGCTATTTCCTTATTTATGGATACTCCT
TGTCGGTGAACTGGTATGAAGGATTGAGTTAAATAGAGACAATCCTGGTT
ATGTTGGCTGCTTTTNNNNNNN
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