EY756735

Overview
NameEY756735
Unique NameEY756735
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length286
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P_ONCVO (Glyceraldehyde 3-phosphate-dehydrogenase OS=Onchocerca volvulus PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.756e-12
Identity = 36/67 (53.73%), Postives = 41/67 (61.19%), Query Frame = 2
Query:   74 VTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEY 274
            + V   ++P EIPW   GAEYVVESTGVFT               VIISAPS DAPMFV+GVN  +Y
Sbjct:   78 IAVHNSKDPAEIPWGVEGAEYVVESTGVFTHTEKASAHLKGGAKKVIISAPSADAPMFVMGVNNDKY 144          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P_LENED (Glyceraldehyde-3-phosphate dehydrogenase OS=Lentinula edodes GN=gpd PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.756e-12
Identity = 38/82 (46.34%), Postives = 49/82 (59.76%), Query Frame = 2
Query:   29 LKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEY 274
            ++ K  K ++ G K ++VFG ++   IPW+  GAEY+VESTGVFT               VIISAPS DAPM+V GVN   Y
Sbjct:   59 VETKGGKLIVDG-KEISVFGEKDAGAIPWSSVGAEYIVESTGVFTTIEKASAHLKGGAKKVIISAPSADAPMYVCGVNLDSY 139          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3PT_HUMAN (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Homo sapiens GN=GAPDHS PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.756e-12
Identity = 33/76 (43.42%), Postives = 46/76 (60.53%), Query Frame = 2
Query:   53 LLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKP 280
            L+     ++V+  + P++IPW   G+ YVVESTGV+                V+ISAPS DAPMFV+GVNE++Y P
Sbjct:  138 LVVDNHEISVYQCKEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSPDAPMFVMGVNENDYNP 213          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P_SCHMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.294e-12
Identity = 42/88 (47.73%), Postives = 53/88 (60.23%), Query Frame = 2
Query:   26 ELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVF-TXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 286
            E+  ++ K  + G K ++V   R+P  IPW + GAEYVVESTGVF T               VIISAPS DAPMFVVGVNE+ Y+  +
Sbjct:   59 EVSTENGKLKVNG-KLISVHCERDPANIPWDKDGAEYVVESTGVFTTIDKAQAHIKNNRAKKVIISAPSADAPMFVVGVNENSYEKSM 145          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P_RHIMI (Glyceraldehyde-3-phosphate dehydrogenase OS=Rhizomucor miehei GN=GPD PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.995e-12
Identity = 41/86 (47.67%), Postives = 52/86 (60.47%), Query Frame = 2
Query:   29 LKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPEL 286
            ++ KD K ++ G KP++V+  R+P  IP    GAEY+VESTGVFT               VIISAPS DAPMFVVGVN   Y  ++
Sbjct:   59 VEAKDGKLVVNG-KPISVYAERDPCCIP-GRIGAEYIVESTGVFTTKEKAGAHLTGGAKKVIISAPSADAPMFVVGVNLESYSSDM 142          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P_BRUMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Brugia malayi GN=G3PD PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.995e-12
Identity = 36/67 (53.73%), Postives = 41/67 (61.19%), Query Frame = 2
Query:   74 VTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEY 274
            ++V   ++P EIPW   GAEYVVESTGVFT               VIISAPS DAPMFV+GVN   Y
Sbjct:   78 ISVHNSKDPAEIPWGVDGAEYVVESTGVFTTTDKASAHLKGGAKKVIISAPSADAPMFVMGVNNDMY 144          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P2_CAEBR (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Caenorhabditis briggsae GN=gpd-2 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.995e-12
Identity = 35/67 (52.24%), Postives = 41/67 (61.19%), Query Frame = 2
Query:   74 VTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEY 274
            + V+  ++P EI W   GA+YVVESTGVFT               VIISAPS DAPMFVVGVN  +Y
Sbjct:   79 IKVYNSKDPAEIQWGAAGADYVVESTGVFTTIEKANAHLKGGAKKVIISAPSADAPMFVVGVNHEKY 145          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3PT_BOVIN (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Bos taurus GN=GAPDHS PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.912e-12
Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 2
Query:   53 LLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKP 280
            L+     ++VF  + P+EIPW   G+ +VVE+TGV+                V+I APS DAPMFV+GVNE EY P
Sbjct:  125 LVVDNNEISVFQCKQPKEIPWKSVGSPFVVEATGVYLSLEETKAHIEAGAQRVVICAPSPDAPMFVMGVNEKEYNP 200          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3PT_MACFA (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Macaca fascicularis GN=GAPDHS PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.673e-12
Identity = 32/76 (42.11%), Postives = 45/76 (59.21%), Query Frame = 2
Query:   53 LLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKP 280
            L+     ++V+  + P++IPW + G+ YVVESTGV+                V+ISAPS DAP FV+GVNE+ Y P
Sbjct:  139 LVVDNHEISVYQCKEPKQIPWRDVGSPYVVESTGVYLSIEAASNHISAGAQRVVISAPSPDAPTFVMGVNENNYNP 214          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3PB_PEA (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Pisum sativum GN=GAPB PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.487e-11
Identity = 34/89 (38.20%), Postives = 52/89 (58.43%), Query Frame = 2
Query:   26 ELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNEHEYKPEL 286
            E+K+ +++T+    KP+ V   R+P ++PWAE G + V+E TGVF                VII+AP+K  D P +V+GVNE +Y  E+
Sbjct:  142 EVKILNNETITVDGKPIKVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVIGVNEQDYGHEV 230          
The following BLAST results are available for this feature:
BLAST of EY756735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
G3P_ONCVO1.756e-1253.73Glyceraldehyde 3-phosphate-dehydrogenase OS=Onchoc... [more]
G3P_LENED1.756e-1246.34Glyceraldehyde-3-phosphate dehydrogenase OS=Lentin... [more]
G3PT_HUMAN1.756e-1243.42Glyceraldehyde-3-phosphate dehydrogenase, testis-s... [more]
G3P_SCHMA2.294e-1247.73Glyceraldehyde-3-phosphate dehydrogenase OS=Schist... [more]
G3P_RHIMI2.995e-1247.67Glyceraldehyde-3-phosphate dehydrogenase OS=Rhizom... [more]
G3P_BRUMA2.995e-1253.73Glyceraldehyde-3-phosphate dehydrogenase OS=Brugia... [more]
G3P2_CAEBR2.995e-1252.24Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Caen... [more]
G3PT_BOVIN3.912e-1243.42Glyceraldehyde-3-phosphate dehydrogenase, testis-s... [more]
G3PT_MACFA6.673e-1242.11Glyceraldehyde-3-phosphate dehydrogenase, testis-s... [more]
G3PB_PEA1.487e-1138.20Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-B01-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756735 ID=EY756735; Name=EY756735; organism=Citrus sinensis; type=EST; length=286bp
CCACGCGTCCGAATGGAAGCACCATGAATTGAAGGTTAAGGACGATAAGA
CCCTTCTCTTTGGTGAGAAGCCTGTCACTGTTTTCGGTGTTAGGAACCCA
GAGGAGATCCCATGGGCTGAGACTGGAGCCGAGTATGTTGTGGAGTCGAC
TGGAGTCTTTACAGACAAGGATAAGGCTGCTGCCCATTTGAAGGGTGGTG
CTAAGAAAGTTATCATCTCAGCCCCCAGCAAGGATGCTCCTATGTTTGTT
GTGGGTGTCAATGAGCACGAGTACAAACCAGAGCTC
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