EY756735

Overview
NameEY756735
Unique NameEY756735
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length286
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P1_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluyveromyces marxianus GN=GAP1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.487e-11
Identity = 34/81 (41.98%), Postives = 44/81 (54.32%), Query Frame = 2
Query:   41 DDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPE 283
            D   L+   K V VF  ++P  +PW + G +  V+STGVF                V+I+APSK APMFVVGVNE +Y  E
Sbjct:   61 DGSNLIINGKKVAVFQEKDPATLPWGKLGVDIAVDSTGVFKELDSAQKHIDAGAKKVVITAPSKTAPMFVVGVNEDKYNGE 141          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3PG_TRYCR (Glyceraldehyde-3-phosphate dehydrogenase, glycosomal OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.942e-11
Identity = 35/82 (42.68%), Postives = 46/82 (56.10%), Query Frame = 2
Query:   38 KDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVVGVNEHEYKP 280
            KDD  ++ G + + V   RNP ++PW + G EYV+ESTG+FT               V+ISAP S  A   V+GVN HEY P
Sbjct:   74 KDDTLVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASGGAKTLVMGVNHHEYNP 155          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3PT_RAT (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus GN=Gapdhs PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.536e-11
Identity = 31/69 (44.93%), Postives = 41/69 (59.42%), Query Frame = 2
Query:   74 VTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKP 280
            + VF  + P+EIPW+  G  YVVE+TGV+                VI++APS DAPM V+GVNE +Y P
Sbjct:  169 INVFQCKEPKEIPWSSVGNPYVVEATGVYLSIEAASGHISSGARRVIVTAPSPDAPMLVMGVNEKDYNP 237          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P1_AGABI (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Agaricus bisporus GN=gpd1 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.536e-11
Identity = 34/86 (39.53%), Postives = 47/86 (54.65%), Query Frame = 2
Query:   26 ELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPE 283
            +++ KD K ++ G K +  F  R P  I WA+ GAEY+VESTGVF                V+I+AP    P +VVGVN  +Y P+
Sbjct:   57 KVETKDGKLIIDGHK-IAAFAEREPANIKWADCGAEYIVESTGVFKTEELAKEHLKGGAKKVVITAPGSGVPTYVVGVNLDKYDPK 141          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P_ASHGO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ashbya gossypii GN=GPD PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.312e-11
Identity = 32/81 (39.51%), Postives = 45/81 (55.56%), Query Frame = 2
Query:   41 DDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPE 283
            +  TL+   K + VF  R+P ++PW E G +  ++STGVF                V+I+APS  APMFV+GVNE +Y  E
Sbjct:   61 EGNTLVIDGKKIKVFQERDPAQLPWGEEGIDIAIDSTGVFKELDSAQKHIDAGAKKVVITAPSSTAPMFVMGVNEEKYAGE 141          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3PB_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Spinacia oleracea GN=GAPB PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.325e-11
Identity = 34/85 (40.00%), Postives = 49/85 (57.65%), Query Frame = 2
Query:   26 ELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNEHEY 274
            ++K+ D++T     KP+ V   R+P ++PWAE G + V+E TGVF                VII+AP+K  D P +VVGVNE +Y
Sbjct:  141 DVKIIDNETFSIDGKPIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGSDIPTYVVGVNEKDY 225          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P2_KLULA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluyveromyces lactis GN=GAP2 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.325e-11
Identity = 33/81 (40.74%), Postives = 44/81 (54.32%), Query Frame = 2
Query:   41 DDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKPE 283
            D+ +L+   K V VF  R+P  +PW E   +  ++STGVF                V+I+APS  APMFVVGVNE +Y  E
Sbjct:   61 DENSLIIDGKKVLVFQERDPATLPWGEHNVDIAIDSTGVFKELDSAQKHIDAGAKKVVITAPSSTAPMFVVGVNEDKYNGE 141          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P1_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Synechocystis sp. (strain PCC 6803) GN=gap1 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.325e-11
Identity = 35/86 (40.70%), Postives = 48/86 (55.81%), Query Frame = 2
Query:   35 VKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD---APMFVVGVNEHEYKPE 283
            V  ++ ++  ++ +  F  RNP ++PW + GA+YVVESTG+FT               VIISAPSKD    P FVVGVN   Y  +
Sbjct:   58 VAKEEGIVIDDQFIPCFSQRNPAQLPWGDLGADYVVESTGLFTTYATAENHLKAGAKRVIISAPSKDPEKIPTFVVGVNHLNYNAD 143          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P_RALSO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ralstonia solanacearum GN=gapA PE=3 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 5.649e-11
Identity = 36/82 (43.90%), Postives = 45/82 (54.88%), Query Frame = 2
Query:   41 DDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNEHEYKPE 283
            D  TL+   K + +  V++P E+ W E GA+ VVESTG+F                VI+SAPSK D PMFV GVN   YK E
Sbjct:   62 DGNTLVVNGKKIRLTAVKDPAELKWGEVGADVVVESTGIFLTKEGAQKHIDAGAKKVIMSAPSKDDTPMFVYGVNHGTYKGE 143          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3P_DICDI (Glyceraldehyde-3-phosphate dehydrogenase OS=Dictyostelium discoideum GN=gpdA PE=1 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 5.649e-11
Identity = 31/68 (45.59%), Postives = 41/68 (60.29%), Query Frame = 2
Query:   74 VTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYK 277
            + VF  ++P  I W+  GAEY+VESTG+F                V+ISAPS DAPM+V+GVNE  Y+
Sbjct:   73 IHVFAEKDPANIKWSSVGAEYIVESTGLFLSTEKAGVHLKGGAKKVVISAPSTDAPMYVMGVNEETYE 140          
The following BLAST results are available for this feature:
BLAST of EY756735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
G3P1_KLUMA1.487e-1141.98Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluy... [more]
G3PG_TRYCR1.942e-1142.68Glyceraldehyde-3-phosphate dehydrogenase, glycosom... [more]
G3PT_RAT2.536e-1144.93Glyceraldehyde-3-phosphate dehydrogenase, testis-s... [more]
G3P1_AGABI2.536e-1139.53Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Agar... [more]
G3P_ASHGO3.312e-1139.51Glyceraldehyde-3-phosphate dehydrogenase OS=Ashbya... [more]
G3PB_SPIOL4.325e-1140.00Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3P2_KLULA4.325e-1140.74Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluy... [more]
G3P1_SYNY34.325e-1140.70Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Syne... [more]
G3P_RALSO5.649e-1143.90Glyceraldehyde-3-phosphate dehydrogenase OS=Ralsto... [more]
G3P_DICDI5.649e-1145.59Glyceraldehyde-3-phosphate dehydrogenase OS=Dictyo... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-B01-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756735 ID=EY756735; Name=EY756735; organism=Citrus sinensis; type=EST; length=286bp
CCACGCGTCCGAATGGAAGCACCATGAATTGAAGGTTAAGGACGATAAGA
CCCTTCTCTTTGGTGAGAAGCCTGTCACTGTTTTCGGTGTTAGGAACCCA
GAGGAGATCCCATGGGCTGAGACTGGAGCCGAGTATGTTGTGGAGTCGAC
TGGAGTCTTTACAGACAAGGATAAGGCTGCTGCCCATTTGAAGGGTGGTG
CTAAGAAAGTTATCATCTCAGCCCCCAGCAAGGATGCTCCTATGTTTGTT
GTGGGTGTCAATGAGCACGAGTACAAACCAGAGCTC
back to top