EY756735

Overview
NameEY756735
Unique NameEY756735
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length286
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3PB_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPB PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.649e-11
Identity = 34/89 (38.20%), Postives = 51/89 (57.30%), Query Frame = 2
Query:   26 ELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNEHEYKPEL 286
            ++K+ D++T+    K + V   R+P ++PWAE G + V+E TGVF                VII+AP+K  D P +VVGVNE +Y  E+
Sbjct:  111 DVKIVDNETISVDGKHIKVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEQDYSHEV 199          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3PT_MOUSE (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Mus musculus GN=Gapdhs PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.378e-11
Identity = 29/69 (42.03%), Postives = 41/69 (59.42%), Query Frame = 2
Query:   74 VTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEHEYKP 280
            +  +  ++P+EIPW+  G  YVVE TGV+                V+++APS DAPMFV+GVNE +Y P
Sbjct:  177 INTYQCKDPKEIPWSSIGNPYVVECTGVYLSIEAASAHISSGARRVVVTAPSPDAPMFVMGVNEKDYNP 245          
BLAST of EY756735 vs. ExPASy Swiss-Prot
Match: G3PG_TRYBB (Glyceraldehyde-3-phosphate dehydrogenase, glycosomal OS=Trypanosoma brucei brucei PE=1 SV=3)

HSP 1 Score: 65.4698 bits (158), Expect = 9.636e-11
Identity = 34/82 (41.46%), Postives = 46/82 (56.10%), Query Frame = 2
Query:   38 KDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVVGVNEHEYKP 280
            KDD  ++ G + + V   RNP ++PW + G EYV+ESTG+FT               V+ISAP S  A  FV+GVN + Y P
Sbjct:   74 KDDTLVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTVKSAAEGHLRGGARKVVISAPASGGAKTFVMGVNHNNYNP 155          
The following BLAST results are available for this feature:
BLAST of EY756735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
G3PB_TOBAC5.649e-1138.20Glyceraldehyde-3-phosphate dehydrogenase B, chloro... [more]
G3PT_MOUSE7.378e-1142.03Glyceraldehyde-3-phosphate dehydrogenase, testis-s... [more]
G3PG_TRYBB9.636e-1141.46Glyceraldehyde-3-phosphate dehydrogenase, glycosom... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-013-B01-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756735 ID=EY756735; Name=EY756735; organism=Citrus sinensis; type=EST; length=286bp
CCACGCGTCCGAATGGAAGCACCATGAATTGAAGGTTAAGGACGATAAGA
CCCTTCTCTTTGGTGAGAAGCCTGTCACTGTTTTCGGTGTTAGGAACCCA
GAGGAGATCCCATGGGCTGAGACTGGAGCCGAGTATGTTGTGGAGTCGAC
TGGAGTCTTTACAGACAAGGATAAGGCTGCTGCCCATTTGAAGGGTGGTG
CTAAGAAAGTTATCATCTCAGCCCCCAGCAAGGATGCTCCTATGTTTGTT
GTGGGTGTCAATGAGCACGAGTACAAACCAGAGCTC
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